FFCP PHASE1:Hg19::chr13:76056749..76056796,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9882 | |EntrezGene=9882 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19165 | |HGNC=19165 | ||
|TSSclassifier=strong | |||
|UniProt=O60343 | |UniProt=O60343 | ||
|association_with_transcript=-499bp_to_ENST00000377625,ENST00000377636,ENST00000425511,ENST00000431480,NM_014832,uc001vjl.1,uc010aer.2,uc010aes.2_5end | |association_with_transcript=-499bp_to_ENST00000377625,ENST00000377636,ENST00000425511,ENST00000431480,NM_014832,uc001vjl.1,uc010aer.2,uc010aes.2_5end | ||
|cluster_id=chr13:76056749..76056796,- | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_5_at_TBC1D4_5end | |description=CAGE_peak_5_at_TBC1D4_5end | ||
|id=chr13:76056749..76056796,- | |id=chr13:76056749..76056796,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.39e-20!115;UBERON:0002616!1.24e-14!59;UBERON:0001049!1.94e-13!57;UBERON:0005068!1.94e-13!57;UBERON:0006241!1.94e-13!57;UBERON:0007135!1.94e-13!57;UBERON:0000955!4.35e-13!69;UBERON:0006238!4.35e-13!69;UBERON:0003080!4.43e-13!42;UBERON:0002780!5.01e-13!41;UBERON:0001890!5.01e-13!41;UBERON:0006240!5.01e-13!41;UBERON:0002346!2.96e-12!90;UBERON:0005743!8.23e-12!86;UBERON:0001017!2.27e-11!82;UBERON:0003075!2.94e-11!86;UBERON:0007284!2.94e-11!86;UBERON:0001869!3.39e-11!32;UBERON:0001893!8.56e-11!34;UBERON:0002020!8.99e-11!34;UBERON:0003528!8.99e-11!34;UBERON:0000073!1.23e-10!94;UBERON:0001016!1.23e-10!94;UBERON:0002791!3.16e-10!33;UBERON:0002619!1.25e-09!22;UBERON:0003056!2.35e-09!61;UBERON:0001950!5.40e-09!20;UBERON:0000033!5.54e-09!123;UBERON:0000153!8.29e-09!129;UBERON:0007811!8.29e-09!129;UBERON:0000062!8.51e-09!511;UBERON:0000956!4.78e-08!25;UBERON:0000203!4.78e-08!25;UBERON:0000924!2.20e-07!173;UBERON:0006601!2.20e-07!173;UBERON:0000922!5.76e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.34e-16;32!UBERON:0001950;2.87e-16;20!UBERON:0002619;2.95e-16;22!UBERON:0003528;1.02e-15;34!UBERON:0002020;1.02e-15;34!UBERON:0001893;1.08e-15;34!UBERON:0002791;3.52e-15;32!UBERON:0002780;2.02e-14;41!UBERON:0001890;2.02e-14;41!UBERON:0000073;2.86e-14;53!UBERON:0002616;2.86e-14;53!UBERON:0000956;1.31e-13;25!UBERON:0000203;1.31e-13;25!UBERON:0000955;1.05e-09;68!UBERON:0007023;4.73e-09;114!UBERON:0000200;2.22e-08;6!UBERON:0001017;5.63e-08;75!UBERON:0001016;2.24e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.63e-27,114;UBERON:0000073,1.52e-24,53;UBERON:0002616,1.52e-24,53;UBERON:0001049,1.64e-22,56;UBERON:0005068,1.64e-22,56;UBERON:0006241,1.64e-22,56;UBERON:0007135,1.64e-22,56;UBERON:0000955,2.57e-20,68;UBERON:0006238,2.57e-20,68;UBERON:0002780,5.97e-20,41;UBERON:0001890,5.97e-20,41;UBERON:0003080,5.97e-20,41;UBERON:0006240,5.97e-20,41;UBERON:0001869,8.65e-19,32;UBERON:0003528,2.58e-18,34;UBERON:0002020,2.58e-18,34;UBERON:0001017,7.33e-18,81;UBERON:0002346,1.96e-17,86;UBERON:0001893,3.41e-17,34;UBERON:0002791,6.50e-17,32;UBERON:0003075,1.03e-16,82;UBERON:0007284,1.03e-16,82;UBERON:0002619,2.66e-16,22;UBERON:0001950,2.84e-16,20;UBERON:0001016,2.04e-15,89;UBERON:0000956,1.19e-13,25;UBERON:0000203,1.19e-13,25;UBERON:0003056,1.39e-12,61;UBERON:0010371,1.73e-12,104;UBERON:0010314,1.14e-10,132;UBERON:0000200,2.10e-08,6;UBERON:0004121,5.08e-08,171;UBERON:0000924,5.08e-08,171;UBERON:0006601,5.08e-08,171 | |||
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| ||
|short_description=p5@TBC1D4 | |short_description=p5@TBC1D4 | ||
}} | }} |
Latest revision as of 23:46, 17 September 2015
Short description: | p5@TBC1D4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TBC1D4_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | -499bp_to_ENST00000377625, ENST00000377636, ENST00000425511, ENST00000431480, NM_014832, uc001vjl.1, uc010aer.2, uc010aes.2_5end |
EntrezGene: | TBC1D4 |
HGNC: | 19165 |
UniProt: | O60343 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.63e-27 | 114 |
regional part of nervous system | 1.52e-24 | 53 |
regional part of brain | 1.52e-24 | 53 |
neural tube | 1.64e-22 | 56 |
neural rod | 1.64e-22 | 56 |
future spinal cord | 1.64e-22 | 56 |
neural keel | 1.64e-22 | 56 |
brain | 2.57e-20 | 68 |
future brain | 2.57e-20 | 68 |
regional part of forebrain | 5.97e-20 | 41 |
forebrain | 5.97e-20 | 41 |
anterior neural tube | 5.97e-20 | 41 |
future forebrain | 5.97e-20 | 41 |
cerebral hemisphere | 8.65e-19 | 32 |
brain grey matter | 2.58e-18 | 34 |
gray matter | 2.58e-18 | 34 |
central nervous system | 7.33e-18 | 81 |
neurectoderm | 1.96e-17 | 86 |
telencephalon | 3.41e-17 | 34 |
regional part of telencephalon | 6.50e-17 | 32 |
neural plate | 1.03e-16 | 82 |
presumptive neural plate | 1.03e-16 | 82 |
regional part of cerebral cortex | 2.66e-16 | 22 |
neocortex | 2.84e-16 | 20 |
nervous system | 2.04e-15 | 89 |
cerebral cortex | 1.19e-13 | 25 |
pallium | 1.19e-13 | 25 |
pre-chordal neural plate | 1.39e-12 | 61 |
ecto-epithelium | 1.73e-12 | 104 |
structure with developmental contribution from neural crest | 1.14e-10 | 132 |
gyrus | 2.10e-08 | 6 |
ectoderm-derived structure | 5.08e-08 | 171 |
ectoderm | 5.08e-08 | 171 |
presumptive ectoderm | 5.08e-08 | 171 |