FFCP PHASE1:Hg19::chr12:27485823..27485868,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:27485823..27485868,+ to FFCP PHASE1:Hg19::chr12:27485823..27485868,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56938 | |EntrezGene=56938 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18984 | |HGNC=18984 | ||
|TSSclassifier=strong | |||
|UniProt=F5H402 | |UniProt=F5H402 | ||
|association_with_transcript=0bp_to_ENST00000395901,ENST00000546179,uc001rhw.2,uc010sjp.1_5end | |||
|cluster_id=chr12:27485823..27485868,+ | |||
|coexpression_cluster_id=C3273 | |||
|description=CAGE_peak_2_at_ARNTL2_5end | |||
|id=chr12:27485823..27485868,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.23e-12!254;CL:0000220!3.31e-12!246;CL:0002321!6.47e-12!248;CL:0000076!2.99e-08!62;CL:0000359!3.87e-08!32;CL:0000222!1.05e-07!119;CL:0002076!1.65e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.68e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.42e-12,253;CL:0002321,4.40e-12,250;CL:0002076,2.01e-08,42;CL:0000359,3.02e-08,32;CL:0000076,1.13e-07,63;CL:0000222,1.39e-07,121;CL:0000223,3.45e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!6.42e-11!69;UBERON:0001981!1.42e-09!60;UBERON:0007500!1.42e-09!60;UBERON:0004537!1.42e-09!60;UBERON:0006965!1.42e-09!60;UBERON:0002049!1.81e-09!79;UBERON:0007798!1.81e-09!79;UBERON:0001637!1.62e-08!42;UBERON:0003509!1.62e-08!42;UBERON:0004572!1.62e-08!42;UBERON:0004111!6.76e-08!241;UBERON:0000490!8.72e-08!138;UBERON:0000119!1.50e-07!312;UBERON:0000483!1.87e-07!309;UBERON:0000480!9.31e-07!626 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.06e-10,68;UBERON:0007500,2.42e-09,59;UBERON:0001981,2.42e-09,59;UBERON:0004537,2.42e-09,59;UBERON:0006965,2.42e-09,59;UBERON:0002049,5.33e-09,78;UBERON:0007798,5.33e-09,78;UBERON:0001637,1.25e-08,42;UBERON:0003509,1.25e-08,42;UBERON:0004572,1.25e-08,42;UBERON:0000490,3.82e-08,148;UBERON:0004111,1.08e-07,240 | |||
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| ||
|short_description=p2@ARNTL2 | |||
}} | }} |
Latest revision as of 00:14, 18 September 2015
Short description: | p2@ARNTL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARNTL2_5end |
Coexpression cluster: | C3273_osteosarcoma_endometrial_embryonic_astrocytoma_mucinous_Myoblast_prostate |
Association with transcript: | 0bp_to_ENST00000395901, ENST00000546179, uc001rhw.2, uc010sjp.1_5end |
EntrezGene: | ARNTL2 |
HGNC: | 18984 |
UniProt: | F5H402 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.42e-12 | 253 |
embryonic cell | 4.40e-12 | 250 |
endo-epithelial cell | 2.01e-08 | 42 |
vascular associated smooth muscle cell | 3.02e-08 | 32 |
squamous epithelial cell | 1.13e-07 | 63 |
mesodermal cell | 1.39e-07 | 121 |
endodermal cell | 3.45e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
vessel | 1.06e-10 | 68 |
epithelial tube open at both ends | 2.42e-09 | 59 |
blood vessel | 2.42e-09 | 59 |
blood vasculature | 2.42e-09 | 59 |
vascular cord | 2.42e-09 | 59 |
vasculature | 5.33e-09 | 78 |
vascular system | 5.33e-09 | 78 |
artery | 1.25e-08 | 42 |
arterial blood vessel | 1.25e-08 | 42 |
arterial system | 1.25e-08 | 42 |
unilaminar epithelium | 3.82e-08 | 148 |
anatomical conduit | 1.08e-07 | 240 |