FFCP PHASE1:Hg19::chr11:45826915..45826926,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:45826915..45826926,+
|short_description=p6@SLC35C1
|description=CAGE_peak_6_at_SLC35C1_5end
|association_with_transcript=215bp_to_ENST00000540685_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55343 | |EntrezGene=55343 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=20197 | |HGNC=20197 | ||
|TSSclassifier=strong | |||
|UniProt=Q96K20 | |UniProt=Q96K20 | ||
|association_with_transcript=215bp_to_ENST00000540685_5end | |||
|cluster_id=chr11:45826915..45826926,+ | |||
|description=CAGE_peak_6_at_SLC35C1_5end | |||
|id=chr11:45826915..45826926,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.51e-15!180;CL:0000057!1.10e-10!75;CL:0000183!1.63e-08!59;CL:0000680!7.09e-08!57;CL:0000056!7.09e-08!57;CL:0000355!7.09e-08!57;CL:0000187!1.48e-07!54;CL:0000192!7.85e-07!42;CL:0000514!7.85e-07!42;CL:0000393!8.27e-07!60;CL:0000211!8.27e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000134;5.62e-08;55!CL:0000346;2.48e-07;3!CL:1000428;2.48e-07;3!CL:0002559;3.15e-07;5!CL:0000048;9.35e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,2.86e-07,3;CL:1000428,2.86e-07,3;CL:0002559,2.94e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.66e-11!83;UBERON:0002329!4.66e-11!83;UBERON:0003077!4.66e-11!83;UBERON:0003059!4.66e-11!83;UBERON:0007282!4.66e-11!83;UBERON:0009618!4.66e-11!83;UBERON:0007285!4.66e-11!83;UBERON:0004290!1.14e-10!70;UBERON:0000486!1.04e-08!82;UBERON:0005256!1.28e-08!143;UBERON:0002100!2.28e-08!216;UBERON:0002385!6.87e-08!63;UBERON:0001015!6.87e-08!63;UBERON:0000383!6.87e-08!63;UBERON:0001134!8.26e-08!61;UBERON:0002036!8.26e-08!61;UBERON:0003082!8.26e-08!61;UBERON:0000475!2.40e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;4.68e-08;9!UBERON:0000412;2.48e-07;3!UBERON:0001992;2.48e-07;3!UBERON:0002073;3.15e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.56e-10,73;UBERON:0007503,2.89e-10,78;UBERON:0002329,6.35e-10,71;UBERON:0003059,6.35e-10,71;UBERON:0007282,6.35e-10,71;UBERON:0004290,6.35e-10,71;UBERON:0009618,6.35e-10,71;UBERON:0003077,1.05e-09,72;UBERON:0007285,1.05e-09,72;UBERON:0003104,4.41e-08,160;UBERON:0009142,4.41e-08,160;UBERON:0002067,6.38e-08,9;UBERON:0004016,6.38e-08,9;UBERON:0010083,6.38e-08,9;UBERON:0005256,1.09e-07,122;UBERON:0000486,1.18e-07,83;UBERON:0000412,2.86e-07,3;UBERON:0001992,2.86e-07,3;UBERON:0002073,2.94e-07,5;UBERON:0005086,2.94e-07,5 | |||
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|phase1_expression=0.726713517082227,0.642301571672949,0.422863212287913,0,0.446961094427288,0.872338524100369,0,0.631719873426831,0.522371256399677,0.245733936501509,0,0.218441372130172,1.05506791291381,0,1.32558950291166,0,0,0.730310090387373,0,0.246242116153576,0.612002073732759,0,0.286235987131057,0.547497700291537,0.376627918784408,0.152826811495903,0.492603536699674,0.236132343941038,0,0,0,0,0.6024118375565,0.369754010166788,0.0774672005803016,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25618263945135,0,0.164437904603676,0.276350017785848,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.255725123687061,1.80719576192283,0,1.30361867064741,0,0.973269740605272,0.0945348171640679,0.221729397462564,0.263504357079378,0.130979075497713,0,1.11235332835329,0,0.174129737299267,0,0,0,0,0.198762407366705,0,0.347140501607594,0.56530794192401,0,0.550236083880135,1.04497483268405,0,0,0,0.402829317109147,0,0.488124115096339,0,0.81014194788176,0.0892997282840798,0,0.337834441449967,1.53316637465883,0,0.549605231791222,0,0,0.436094052142534,0.496971951695318,0.633152558322899,0.132409180813219,0.286836620748814,0.354668382198357,1.12135520028461,0,0.98667019366864,0.933633106199299,0.538842688278752,0.817309515567294,0.605429710579726,0.576175924479999,0.234321431833797,1.5608003841516,1.1409436430889,0.597794722207204,0.352303495931295,0.323745888736263,1.12360645361799,0.204154171254893,0.491337269247072,0,0,0.247266929278557,0.910161361938026,1.43723628363248,0.336672227908132,0.250237039743928,0.277064115484183,0.877955241761676,0.919463387397059,0.600952235626387,0.113432183160021,0.538168907066586,0.427114777637135,0.635795703478686,0.300091096084402,0.618315175430633,0.515281080091258,0.744467425326359,0.843881661206331,1.36411807225678,0.757301322732344,0.276149695926898,1.61646056818812,1.42003837006646,0.403008392910561,0.67824236924195,0.386521706326594,0,0,0.243947412259191,0.132529768321485,0,0.10366105501537,0,0,3.12899064659632,1.28648187638577,1.38134921352481,0,1.44375896333917,0.118306800039844,0,0,0,0.435758888184812,0.474541238222193,0,0,0,0,1.40241773803446,0.4115740113314,2.94017422771084,1.26755034821831,0.982827216677626,0.590789906681404,0,0.122988438543114,0.857839051492628,0.548751427043128,0,0.100528972411631,0.0925884451585296,0.325808305310325,1.03993478527958,0,0.34779121492523,0.587043471179108,0.721832238805369,0.462985512576611,0.190254152234598,0.790204397959275,0.858486162094873,0,0.468008530278475,0.148631162288728,0,0.16798212819886,0.425325291727159,0.0895585227028483,0,0.383382679165211,0.985326475791887,0,0,0,0,0.253991577168676,0,0,0,0.205654985406647,0.300343057843917,0,0.672786506072164,0,0.7333828582095,0.775630294546667,3.57656445851882,0,0.531876233169741,1.04007436911366,0.257207374262142,1.41849132023278,0.799266537048298,0.285955987316295,1.08524321078289,1.64648067356154,0.325736184293735,0.355391948742546,0,0.301439377059586,0.871533458600294,0.99972991182057,0,0,2.10833939483032,0,1.14861935834114,0,0.434343920002738,0.410952645100767,0.358121926479791,0.224170287987055,0,0,0,0.508189248444927,0,0,0.167516265334349,0.637938751653163,0,0,0,0.24538298343828,0,0.542530047399471,2.28767947683888,2.85486382075459,1.73472656537328,1.87426263988341,0.902838299183157,0,1.03473071292505,0,0.921845842708516,0.60818530127658,0.783204629850962,1.37257369524342,0,0,0,0,1.66435439510497,1.5119514666484,1.24053903909388,0.153461973288062,0.841980283299221,1.02511319404561,1.02341449813341,0.64341568457443,0,0.616838775210622,0.710246901252508,0.657017248110473,2.07701771673448,0.929683027679674,0.241718899183244,0.200506470303285,0.276242966807689,0.68888668898764,0.182091168006717,0.655622074797121,0,0.231046011313244,0.784349769176855,0,0.211103257785751,0,1.02056223165909,0.647747748306418,0,0,1.00337954770971,0,0,0,0,0.522870902049801,0,0.656029291399411,0,0,0.183138929636687,0.247528499761764,0,0,1.6068392984416,0.096670718292122,0.308097234229289,0.307007349452259,0.275673144969061,0.644521469209642,0.290033387828457,0.426133137080504,0.623224249527161,0.165284915360978,0,0.127612712494584,0.2023155617111,0.464845549297286,0.94443704049192,0.6970372701606,0.308033580176089,1.59691809095107,0,0.37064843820784,0.286249773483982,0.744316738719335,0.632758849437452,0.190630193923825,0.511795582622668,0.855877976067841,1.90921948755562,1.56989728039846,0.719489830333259,1.09814811894422,0.471249609382746,1.2130948894399,1.58510321173008,0,0.975267478179181,0.243713489631284,0,1.50149902548784,1.83827061539827,0,1.65409603063837,1.32687795048244,1.75380354101505,2.31510213706675,1.9676842561399,0.405820753925408,0.30982349809975,1.12678241012897,0.573645408816206,0.392996164052485,0,0.709522128141196,0.211107635297664,0.329294892959902,0.75894634753143,0.349934720244983,0.19244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| ||
|short_description=p6@SLC35C1 | |||
}} | }} |
Latest revision as of 01:22, 18 September 2015
Short description: | p6@SLC35C1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLC35C1_5end |
Coexpression cluster: | NA |
Association with transcript: | 215bp_to_ENST00000540685_5end |
EntrezGene: | SLC35C1 |
HGNC: | 20197 |
UniProt: | Q96K20 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 2.86e-07 | 3 |
stem cell of epidermis | 2.86e-07 | 3 |
hair follicle cell | 2.94e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 1.56e-10 | 73 |
epithelial vesicle | 2.89e-10 | 78 |
somite | 6.35e-10 | 71 |
presomitic mesoderm | 6.35e-10 | 71 |
presumptive segmental plate | 6.35e-10 | 71 |
dermomyotome | 6.35e-10 | 71 |
trunk paraxial mesoderm | 6.35e-10 | 71 |
paraxial mesoderm | 1.05e-09 | 72 |
presumptive paraxial mesoderm | 1.05e-09 | 72 |
mesenchyme | 4.41e-08 | 160 |
entire embryonic mesenchyme | 4.41e-08 | 160 |
dermis | 6.38e-08 | 9 |
dermatome | 6.38e-08 | 9 |
future dermis | 6.38e-08 | 9 |
trunk mesenchyme | 1.09e-07 | 122 |
multilaminar epithelium | 1.18e-07 | 83 |
dermal papilla | 2.86e-07 | 3 |
papillary layer of dermis | 2.86e-07 | 3 |
hair follicle | 2.94e-07 | 5 |
hair follicle placode | 2.94e-07 | 5 |