FFCP PHASE1:Hg19::chr6:32095504..32095516,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:32095504..32095516,-
|short_description=p9@ATF6B
|description=CAGE_peak_9_at_ATF6B_5end
|association_with_transcript=18bp_to_uc011dpg.1_5end
|EntrezGene=1...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1388 | |EntrezGene=1388 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2349 | |HGNC=2349 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=18bp_to_uc011dpg.1_5end | |||
|cluster_id=chr6:32095504..32095516,- | |||
|description=CAGE_peak_9_at_ATF6B_5end | |||
|id=chr6:32095504..32095516,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000138;4.13e-13;6!CL:0002570;4.73e-10;8!CL:0000153;4.70e-09;9!CL:0000447;4.70e-09;9!CL:0002577;2.05e-07;3!CL:0000346;2.71e-07;3!CL:1000428;2.71e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,5.11e-13,6;CL:0000138,5.11e-13,6;CL:0002570,4.03e-10,8;CL:0000153,5.42e-09,9;CL:0000447,5.42e-09,9;CL:0002577,2.05e-07,3;CL:0000346,2.63e-07,3;CL:1000428,2.63e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;8.94e-20;1!DOID:4549;8.94e-20;1!DOID:5861;8.94e-20;1!DOID:6496;8.94e-20;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,8.95e-20,1;DOID:4549,8.95e-20,1;DOID:5861,8.95e-20,1;DOID:6496,8.95e-20,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002418;1.82e-07;3!UBERON:0004755;1.82e-07;3!UBERON:0000412;2.71e-07;3!UBERON:0001992;2.71e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,1.82e-07,3;UBERON:0004755,1.82e-07,3;UBERON:0000412,2.63e-07,3;UBERON:0001992,2.63e-07,3 | |||
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| ||
|short_description=p9@ATF6B | |||
}} | }} |
Latest revision as of 01:34, 18 September 2015
Short description: | p9@ATF6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ATF6B_5end |
Coexpression cluster: | NA |
Association with transcript: | 18bp_to_uc011dpg.1_5end |
EntrezGene: | ATF6B |
HGNC: | 2349 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 5.11e-13 | 6 |
chondrocyte | 5.11e-13 | 6 |
mesenchymal stem cell of adipose | 4.03e-10 | 8 |
GAG secreting cell | 5.42e-09 | 9 |
carbohydrate secreting cell | 5.42e-09 | 9 |
placental epithelial cell | 2.05e-07 | 3 |
hair follicle dermal papilla cell | 2.63e-07 | 3 |
stem cell of epidermis | 2.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 1.82e-07 | 3 |
skeletal tissue | 1.82e-07 | 3 |
dermal papilla | 2.63e-07 | 3 |
papillary layer of dermis | 2.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 8.95e-20 | 1 |
extraosseous chondrosarcoma | 8.95e-20 | 1 |
myxoid chondrosarcoma | 8.95e-20 | 1 |
extraskeletal myxoid chondrosarcoma | 8.95e-20 | 1 |