FFCP PHASE1:Hg19::chr7:27212407..27212421,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3206 | |EntrezGene=3206 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5100 | |HGNC=5100 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=86bp_to_ENST00000519593,ENST00000521421_5end | |association_with_transcript=86bp_to_ENST00000519593,ENST00000521421_5end | ||
|cluster_id=chr7:27212407..27212421,- | |||
|description=CAGE_peak_9_at_HOXA10_5end | |description=CAGE_peak_9_at_HOXA10_5end | ||
|id=chr7:27212407..27212421,- | |id=chr7:27212407..27212421,- | ||
|ontology_enrichment_celltype=CL:0002620!1.15e-11!23;CL:0000499!2.11e-08!27 | |ontology_enrichment_celltype=CL:0002620!1.15e-11!23;CL:0000499!2.11e-08!27 | ||
|ontology_enrichment_celltype_v019=CL:0002540;2.32e-12;6!CL:0002092;1.28e-07;10!CL:0002537;1.63e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002540,1.54e-12,6;CL:0002092,1.01e-07,10;CL:0002537,1.77e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0009847;1.97e-11;3!UBERON:0003353;1.97e-11;3!UBERON:0005795;6.67e-08;10 | |||
|ontology_enrichment_disease=DOID:17!2.22e-08!5;DOID:450!2.22e-08!5;DOID:66!2.22e-08!5;DOID:423!2.22e-08!5;DOID:0080000!2.22e-08!5;DOID:11722!2.22e-08!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006554!3.01e-09!44;UBERON:0001008!6.19e-09!45;UBERON:0002367!2.89e-07!11;UBERON:0010147!2.89e-07!11;UBERON:0009846!2.89e-07!11;UBERON:0003353!2.89e-07!11;UBERON:0004902!2.89e-07!11;UBERON:0003820!2.89e-07!11;UBERON:0009847!2.89e-07!11;UBERON:0000162!5.26e-07!14;UBERON:0001353!5.26e-07!14;UBERON:0000163!5.26e-07!14;UBERON:0006866!5.26e-07!14;UBERON:0000164!5.26e-07!14;UBERON:0000931!5.26e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0005795;1.07e-09;1!UBERON:0006834;1.07e-09;1!UBERON:0004765;2.09e-07;26!UBERON:0011135;3.34e-07;5!UBERON:0002216;3.34e-07;5!UBERON:0011134;3.34e-07;5!UBERON:0002209;3.34e-07;5!UBERON:0002213;3.34e-07;5!UBERON:0007844;3.34e-07;5!UBERON:0011138;3.34e-07;5!UBERON:0001130;3.34e-07;5!UBERON:0001066;3.34e-07;5!UBERON:0001468;3.34e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,8.68e-10,1;UBERON:0011135,4.16e-07,5;UBERON:0002216,4.16e-07,5;UBERON:0011134,4.16e-07,5;UBERON:0002209,4.16e-07,5;UBERON:0002213,4.16e-07,5;UBERON:0005856,4.16e-07,5;UBERON:0005866,4.16e-07,5;UBERON:0005863,4.16e-07,5;UBERON:0007844,4.16e-07,5;UBERON:0011138,4.16e-07,5;UBERON:0001130,4.16e-07,5;UBERON:0001066,4.16e-07,5;UBERON:0001468,4.16e-07,5 | |||
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| ||
|short_description=p9@HOXA10 | |short_description=p9@HOXA10 | ||
}} | }} |
Latest revision as of 01:49, 18 September 2015
Short description: | p9@HOXA10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_HOXA10_5end |
Coexpression cluster: | NA |
Association with transcript: | 86bp_to_ENST00000519593, ENST00000521421_5end |
EntrezGene: | HOXA10 |
HGNC: | 5100 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of the bone marrow | 1.54e-12 | 6 |
bone marrow cell | 1.01e-07 | 10 |
amnion mesenchymal stem cell | 1.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
uterus or analog | 8.68e-10 | 1 |
intervertebral cartilage | 4.16e-07 | 5 |
symphysis | 4.16e-07 | 5 |
nonsynovial joint | 4.16e-07 | 5 |
fibrous joint | 4.16e-07 | 5 |
cartilaginous joint | 4.16e-07 | 5 |
developing mesenchymal condensation | 4.16e-07 | 5 |
pre-cartilage condensation | 4.16e-07 | 5 |
cartilaginous condensation | 4.16e-07 | 5 |
cartilage element | 4.16e-07 | 5 |
post-cranial axial skeletal system | 4.16e-07 | 5 |
vertebral column | 4.16e-07 | 5 |
intervertebral disk | 4.16e-07 | 5 |
intervertebral joint | 4.16e-07 | 5 |