FFCP PHASE1:Hg19::chr12:31742847..31742862,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=42517 | |HGNC=42517 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000536397_5end | |association_with_transcript=0bp_to_ENST00000536397_5end | ||
|cluster_id=chr12:31742847..31742862,+ | |||
|description=CAGE_peak_1_at_DENND5B-AS1_5end | |description=CAGE_peak_1_at_DENND5B-AS1_5end | ||
|id=chr12:31742847..31742862,+ | |id=chr12:31742847..31742862,+ | ||
|ontology_enrichment_celltype=CL:0000236!5.44e-10!14;CL:0000945!7.34e-10!24;CL:0000826!7.34e-10!24 | |ontology_enrichment_celltype=CL:0000236!5.44e-10!14;CL:0000945!7.34e-10!24;CL:0000826!7.34e-10!24 | ||
|ontology_enrichment_celltype_v019=CL:0000236;7.69e-77;13!CL:0000945;2.80e-41;24!CL:0000542;1.23e-15;53!CL:0002591;1.51e-13;1!CL:0000313;1.51e-13;1!CL:0000159;2.05e-07;2 | |ontology_enrichment_celltype_v019=CL:0000236;7.69e-77;13!CL:0000945;2.80e-41;24!CL:0000542;1.23e-15;53!CL:0002591;1.51e-13;1!CL:0000313;1.51e-13;1!CL:0000159;2.05e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.66e-71,14;CL:0000945,2.80e-41,24;CL:0000826,2.80e-41,24;CL:0000838,1.43e-18,52;CL:0000542,3.34e-18,53;CL:0000051,3.34e-18,53;CL:0002591,1.42e-13,1;CL:0000313,1.61e-13,1;CL:0000738,6.10e-08,136;CL:0002087,9.39e-08,115;CL:0000159,2.12e-07,2;CL:0002031,2.18e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;1.23e-15;53 | |ontology_enrichment_development_v019=CL:0000051;1.23e-15;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2152;1.51e-13;1 | |ontology_enrichment_disease_v019=DOID:2152;1.51e-13;1 | ||
|ontology_enrichment_disease_v019_2=DOID:2152,1.61e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.19e-09!9;UBERON:0001557!1.88e-07!19 | |ontology_enrichment_uberon=UBERON:0001737!2.19e-09!9;UBERON:0001557!1.88e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.51e-13;1!UBERON:0000078;2.05e-07;2!UBERON:0004909;2.05e-07;2!UBERON:0002012;2.05e-07;2!UBERON:0008886;2.05e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0004911;1.51e-13;1!UBERON:0000078;2.05e-07;2!UBERON:0004909;2.05e-07;2!UBERON:0002012;2.05e-07;2!UBERON:0008886;2.05e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.61e-13,1;UBERON:0000078,1.99e-07,2;UBERON:0007497,1.99e-07,2;UBERON:0003643,1.99e-07,2;UBERON:0003504,1.99e-07,2;UBERON:0003469,1.99e-07,2;UBERON:0003496,1.99e-07,2;UBERON:0002012,1.99e-07,2;UBERON:0008886,1.99e-07,2;UBERON:0007303,1.99e-07,2;UBERON:0002061,1.99e-07,2;UBERON:0005432,1.99e-07,2;UBERON:0004363,1.99e-07,2;UBERON:0004909,2.12e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0.602694528023977,0,0,0,0,0.313454721478088,0.286235987131057,0.273748850145768,0.251085279189606,0,0,0,0.786728553697808,0,0,0,0,0,0.619737604642413,0.284338464974843,0.293600439334847,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0.689491361473237,0.645484683583826,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0.316462387440884,0,0.425208599930087,0.209658645508376,0,0,0.16072558669708,0.285012743741249,0.19891667719909,0,3.51992488922645,2.18455444504853,0,3.84057200309856,2.40237592221607,2.87376219977242,0.661044872784862,2.86216126360609,2.27685187643779,2.34894875748376,3.44045905312706,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0,0.174129737299267,0,0,1.14398982156026,0.74291500265913,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.573673241497627,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0.247266929278557,0,0,0,0,0,0,0,0,0.226864366320042,0.179389635688862,0,0,0,0,0,0.18611685633159,0,0.194874010322397,0,0.0920498986422993,0.161646056818812,0.355009592516614,0,0,0,0,0,0.365921118388786,0.265059536642971,0.580969714347592,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0.709840800239063,0.505754070234305,0.964044119533928,0.441175890929576,0.653638332277218,0.949082476444386,0.808987848960987,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0.231860809950154,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0.37872730027914,0.126995788584338,0.381988425558278,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0.106727557803444,0.303127571446259,0,0.30239029332968,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0,0.604297247958111,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.309123034943167,0.183138929636687,0.247528499761764,0,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0.38126038784765,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,1.13008116620243,0.551365343546124,0,0,0.578775534266688,0,0.202910376962704,0,0.281695602532241,0,0,0.35667105148125,0.354761064070598,0,0,0,0.699869440489966,0.0962221127255121,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0.764637207142375,0,0.238231775457789,0,0.648473311192717,0,0,0,0,0,0.557409525377156,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0,0,0,0.102268682502155,0.123084805461069,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0.552896299656123,0.295547618953547,0,0.10893846351899,0.139423744278603,0.0769502585037971,0,0,0.0897576444097721,0,0.638002319463839,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0.282706142867882,0.216388639742091,0,0.265372693510018,0,0,0.123563938946503,0,0,0,0,0.364909578431332,0,0.242780379534093,0,0,0,0.063186579628488,0.751617097072463,0.207376382794494,0.664653872707185,0,0.313932918407225,0,0.284609546029793,0.138674673013139,0.173559738335131,0,0,0,0,0.677294319023596,0.803982487948041,0.492692742319255,0.0969890164884194,0,0.225980740780532,0,0,0.316553979779393,0,0.160317640503067,0,0,0.144090417154106,0.229073192331831,0.514784993585894,0,0,0,0,0.209205692624666,0.101998217636322,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0.272406812223151,0.643012593860077,1.10031549277787,0.415440338029185,0,0,0.121499113316049,0,0.236417121897595,0.104909176269996,0.211200673038813,0,0,0,0,0.25426853765475,0.542999601753713,0,0,0,0,0.170388021785422,0.226624183040251,0,0,0.129282956361551,0.39669780522807,0,0,0.106787412567695,0,0,0,0,0.243585196761792,0,0,0,0.306345576763462,0.655745261419609,0,0,0.122026264901963,0.250381861413,0,0.332787154610557,0.434674820589684,0.138348634936231,0,0,0,0,0,0.144921028610825,0.149254802886874,0,0,0.189403005275089,0,0,0.228840068396924,0.151230923763239,0,0,0,0,0.155262956876259,0,0,0,0,0.380805212168795,0,0.181848659202559,0.214821114084977,0,0,0,0,0,0,0,0,0.260994291965212,0.226705925512272,0,0,0.179088841081487,10.1904477563121,0,0,0.192914038270915,0.168942440653073,0.256241518587947,0,0,0.276516872303462,0.389720617678777,0.132864840313363,0.163565394255844,0,0.491545817507439,0,0,0,0.172214979660816,0,0,0,0,0,0.107824811396682,0.157265941855896,0.327628914576042,0,0,0,0,0,0.630893960010027,0,0.705351887381368,0,0.128458450192919,0,0.478901577171454,0,0,0.138314504928436,0,0,0,0.11796972334774,0,0,0,0,0.1989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| ||
|short_description=p1@DENND5B-AS1 | |short_description=p1@DENND5B-AS1 | ||
}} | }} |
Latest revision as of 03:30, 18 September 2015
Short description: | p1@DENND5B-AS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DENND5B-AS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000536397_5end |
EntrezGene: | NA |
HGNC: | 42517 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.66e-71 | 14 |
lymphocyte of B lineage | 2.80e-41 | 24 |
pro-B cell | 2.80e-41 | 24 |
lymphoid lineage restricted progenitor cell | 1.43e-18 | 52 |
lymphocyte | 3.34e-18 | 53 |
common lymphoid progenitor | 3.34e-18 | 53 |
smooth muscle cell of the pulmonary artery | 1.42e-13 | 1 |
serous secreting cell | 1.61e-13 | 1 |
leukocyte | 6.10e-08 | 136 |
nongranular leukocyte | 9.39e-08 | 115 |
seromucus secreting cell | 2.12e-07 | 2 |
hematopoietic lineage restricted progenitor cell | 2.18e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.61e-13 | 1 |
mixed ectoderm/mesoderm/endoderm-derived structure | 1.99e-07 | 2 |
developing epithelial placode | 1.99e-07 | 2 |
respiratory system arterial blood vessel | 1.99e-07 | 2 |
respiratory system blood vessel | 1.99e-07 | 2 |
respiratory system artery | 1.99e-07 | 2 |
head blood vessel | 1.99e-07 | 2 |
pulmonary artery | 1.99e-07 | 2 |
pulmonary vascular system | 1.99e-07 | 2 |
pharyngeal vasculature | 1.99e-07 | 2 |
truncus arteriosus | 1.99e-07 | 2 |
aortic sac | 1.99e-07 | 2 |
pharyngeal arch artery | 1.99e-07 | 2 |
epithelium of gonad | 2.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.61e-13 | 1 |