FFCP PHASE1:Hg19::chr6:32812101..32812112,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:32812101..32812112,- to FFCP PHASE1:Hg19::chr6:32812101..32812112,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5696 | |EntrezGene=5696 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9545 | |HGNC=9545 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-277bp_to_ENST00000374882_5end | |||
|cluster_id=chr6:32812101..32812112,- | |||
|description=CAGE_peak_6_at_PSMB8_5end | |||
|id=chr6:32812101..32812112,- | |||
|ontology_enrichment_celltype=CL:0000738!2.23e-16!140;CL:0002087!3.31e-16!119;CL:0002031!2.48e-13!124;CL:0000988!1.23e-12!182;CL:0000542!1.83e-12!53;CL:0000051!1.83e-12!53;CL:0000838!2.33e-12!52;CL:0000037!1.07e-11!172;CL:0000566!1.07e-11!172;CL:0000084!3.00e-10!25;CL:0000827!3.00e-10!25;CL:0002032!9.36e-10!165;CL:0000837!9.36e-10!165;CL:0000860!2.66e-08!45;CL:0000003!1.80e-07!722;CL:0002057!3.52e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000084;4.33e-21;25!CL:0000624;7.31e-16;6!CL:0000791;3.18e-13;18!CL:0000789;3.18e-13;18!CL:0002419;3.18e-13;18!CL:0000542;1.63e-08;53!CL:0000898;1.96e-08;3!CL:0000860;2.03e-07;33!CL:0002057;2.03e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.24e-21,25;CL:0000827,1.24e-21,25;CL:0000738,3.55e-18,136;CL:0000624,1.77e-16,6;CL:0002087,4.31e-16,115;CL:0000988,6.69e-16,177;CL:0000838,3.34e-14,52;CL:0002031,5.86e-14,120;CL:0000037,6.97e-14,168;CL:0000542,7.65e-14,53;CL:0000051,7.65e-14,53;CL:0000791,1.21e-13,18;CL:0000789,1.21e-13,18;CL:0002420,1.21e-13,18;CL:0002419,1.21e-13,18;CL:0000790,1.21e-13,18;CL:0002032,7.12e-13,161;CL:0000837,7.12e-13,161;CL:0000898,7.53e-09,3;CL:0000860,2.93e-07,42;CL:0002057,2.93e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000790;3.18e-13;18!CL:0000051;1.63e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.22e-07!102;UBERON:0003061!7.22e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.495065411840187,0,0,0,0,0.487932798790507,0.246242116153576,0,0.313454721478088,0.572471974262113,0,0.125542639594803,0.916960868975415,1.06730766284929,0.865818594450472,1.18009283054671,1.53531759238885,0.309632246632152,0,0,0.369754010166788,1.85921281392724,0.426507697462265,0.587200878669695,0,0.401088894940283,0.434021741431704,0,0,0,0.290796477559129,0.377875943688809,0.242584061187816,0.929716147622738,0.411167888021826,0,4.31538588483226,4.86705342405291,6.85798466676897,1.03423704220986,0,0,0,0.272906150057846,0.224723484445085,0,0,1.27867425159808,3.29851300186716,3.19141852194611,0.852449501065388,0.290209238628584,0,0,3.76872997885115,4.17186334736161,5.64690996233303,0.605399502633369,1.10483290796269,0,0,1.4882300997553,0.628975936525128,0.22465726229299,0.450530678524519,0.16072558669708,0,0.19891667719909,0.182664153764634,0,0,0,0,0.400395987036012,0,0,0,0,0.587237189370939,0.764546456250458,0,1.12101712596307,0.263384084775077,2.55722701147983,1.96505381374582,2.05601498999509,0.167186495390678,1.95553359980154,0.473447805734733,0,1.00269411196656,1.17842362989935,0.664601683750863,1.35401931882508,0.896639238079726,1.04047478047903,0.657751618414705,0.552700035571697,1.44901542867526,1.03800594213442,0,1.04535523804977,1.0197840842781,1.91610246800961,2.40539211837841,0.759059076058509,0,0,0,0.301150238155546,0.511946444617674,0,0.710331756132051,2.46338399076314,2.21767417547206,1.87208137048455,1.30341963494519,0,0,0,0,0,0,0,0.486634870302636,0,0.221729397462564,0,0,0.728590576585084,0.370784442784429,0,0.174129737299267,0.132957960518865,0.476981248610684,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0.183201743930407,0,3.87780264148325,0,0,0.25326102332916,0,0,0.354668382198357,0,0,0.98667019366864,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.30648779579902,0.600952235626387,0,0,0,0.423863802319124,0.300091096084402,0,0.257640540045629,0.37223371266318,0,0.0974370051611986,0.252433774244115,0.0920498986422993,0.161646056818812,0,0,0.169560592310488,0,0,0,0.121973706129595,0,0.348581828608555,0,0.504641701751257,0.36497735907583,0,0,0,0,0.721879481669586,0.236613600079688,1.01150814046861,0.482022059766964,0.441175890929576,0.435758888184812,0.474541238222193,0.269662616320329,0.392442930250692,0,0,0,0,0,0,0,0,2.6487785964879,0.122988438543114,0,0.109750285408626,0,0.603173834469785,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0.16798212819886,0,0.268675568108545,0.290633938513962,0,0.492663237895943,0,0.207328115540772,0,0,0.063497894292169,0.381988425558278,1.17217447210047,0,0.102827492703324,0.300343057843917,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0.479249710983165,0,0,0.144781306667579,0.205476322550383,0,0.560425719967636,1.57624608161542,0.862510299438069,1.02674429023799,0.254094624222463,0,0.773288812777695,0.335032530668698,1.27587750330633,0,2.99161459204025,0,0,0,0,0,0,0,0,0,2.27407504055985,0,0,0,0.347534457872331,0.195801157462741,0,0.206768026122887,0.215714200818617,1.17400313583789,0.303127571446259,0,0,0,0,0,0.128139149255701,0,0,0,0.308419387605311,0,0.246381468041427,1.55776328755086,0.464841513839837,0,0,0,0.34444334449382,0.546273504020151,0.131124414959424,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0.256450125116389,0,0.325378394664303,0.103041011647722,0,0.247528499761764,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0,0,0.616067160352178,0,1.73986598415015,0,0.143124886741991,0.372158369359667,0,0.38126038784765,0,0,0,0,0,0,0,0.202182481573316,0,0,0,2.19342140668156,0,0,0,0,0,0,0,0,0,0.608731130888112,0.92947049429925,0,0,0.196498082026242,0,0,1.05553817648832,0,0,0,0.288666338176536,0.670302275535787,0,0.0941438007767792,0,1.68471475667626,0,0,0,0.764637207142375,0,0.238231775457789,0,0,0,0,0,0,0,0.185803175125719,0.865615277858669,0.0711418433484141,1.91311527274587,0.798317485731266,0,0,0,0,0.228234679033192,0.313359791546046,0,0,0,0,0,0,0.307240764308458,0,0,0.19538809540204,0,0,0.540911356951966,0,1.4098700508785,0,0.146508179271894,0,1.33732061132974,0.284136146806413,0,0,0,0,0,0.333926115068718,0.494411622680279,0,0,0,0,0.818149460017238,0.369254416383208,0.311039587661807,0.0898683511473268,0.716084698702437,0,0,0,1.11136990144637,0,0.0927680981618513,0,0,0,0,0,0.762760950878299,0.236387681767936,0.344743373241465,0,0.868124974666461,0,0.120596438625408,0,0,0.295547618953547,0,2.39664619741778,0.278847488557207,0,1.59518878185802,0,0,0.108647371922008,0,0.641183153813036,0,8.17546385565892,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0,0,3.26173241548684,6.30176088627165,8.04049011192006,0.067401132980677,0,0,0,0.586993856796269,0.242780379534093,0,0,0,0.31593289814244,0,0,0,0,0,0,0.284609546029793,0,0,0.0979923974143777,0.261177619741208,0,0.1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| ||
|short_description=p6@PSMB8 | |||
}} | }} |
Latest revision as of 04:11, 18 September 2015
Short description: | p6@PSMB8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PSMB8_5end |
Coexpression cluster: | NA |
Association with transcript: | -277bp_to_ENST00000374882_5end |
EntrezGene: | PSMB8 |
HGNC: | 9545 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.24e-21 | 25 |
pro-T cell | 1.24e-21 | 25 |
leukocyte | 3.55e-18 | 136 |
CD4-positive, alpha-beta T cell | 1.77e-16 | 6 |
nongranular leukocyte | 4.31e-16 | 115 |
hematopoietic cell | 6.69e-16 | 177 |
lymphoid lineage restricted progenitor cell | 3.34e-14 | 52 |
hematopoietic lineage restricted progenitor cell | 5.86e-14 | 120 |
hematopoietic stem cell | 6.97e-14 | 168 |
lymphocyte | 7.65e-14 | 53 |
common lymphoid progenitor | 7.65e-14 | 53 |
mature alpha-beta T cell | 1.21e-13 | 18 |
alpha-beta T cell | 1.21e-13 | 18 |
immature T cell | 1.21e-13 | 18 |
mature T cell | 1.21e-13 | 18 |
immature alpha-beta T cell | 1.21e-13 | 18 |
hematopoietic oligopotent progenitor cell | 7.12e-13 | 161 |
hematopoietic multipotent progenitor cell | 7.12e-13 | 161 |
naive T cell | 7.53e-09 | 3 |
classical monocyte | 2.93e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.93e-07 | 42 |