FFCP PHASE1:Hg19::chr15:55790515..55790605,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=161582,9236 | |EntrezGene=161582,9236 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21493,24227,43019 | |HGNC=21493,24227,43019 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WXU2,E5RJ13,B4DY92 | |UniProt=Q8WXU2,E5RJ13,B4DY92 | ||
|association_with_transcript=0bp_to_ENST00000420792,ENST00000448430,ENST00000457155,ENST00000519017,ENST00000522437,ENST00000524160_5end | |association_with_transcript=0bp_to_ENST00000420792,ENST00000448430,ENST00000457155,ENST00000519017,ENST00000522437,ENST00000524160_5end | ||
|cluster_id=chr15:55790515..55790605,- | |||
|coexpression_cluster_id=C3459 | |||
|description=CAGE_peak_3_at_CCPG1_5end,CAGE_peak_3_at_DYX1C1-CCPG1_5end,CAGE_peak_3_at_DYX1C1_5end | |description=CAGE_peak_3_at_CCPG1_5end,CAGE_peak_3_at_DYX1C1-CCPG1_5end,CAGE_peak_3_at_DYX1C1_5end | ||
|id=chr15:55790515..55790605,- | |id=chr15:55790515..55790605,- | ||
|ontology_enrichment_celltype=CL:0000066!6.20e-07!254 | |ontology_enrichment_celltype=CL:0000066!6.20e-07!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.51e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.95e-07;29 | |||
|ontology_enrichment_disease=DOID:0050687!2.68e-15!143;DOID:305!3.31e-13!106;DOID:14566!3.05e-09!239;DOID:162!9.42e-09!235 | |ontology_enrichment_disease=DOID:0050687!2.68e-15!143;DOID:305!3.31e-13!106;DOID:14566!3.05e-09!239;DOID:162!9.42e-09!235 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.06e-15,143;DOID:305,3.47e-13,106;DOID:14566,3.30e-09,239;DOID:162,1.02e-08,235 | |||
|ontology_enrichment_uberon=UBERON:0000073!7.85e-16!94;UBERON:0001016!7.85e-16!94;UBERON:0002780!2.64e-15!41;UBERON:0001890!2.64e-15!41;UBERON:0006240!2.64e-15!41;UBERON:0005743!3.40e-15!86;UBERON:0001017!6.49e-15!82;UBERON:0003080!1.27e-14!42;UBERON:0002346!1.29e-14!90;UBERON:0001049!1.35e-14!57;UBERON:0005068!1.35e-14!57;UBERON:0006241!1.35e-14!57;UBERON:0007135!1.35e-14!57;UBERON:0003075!2.04e-13!86;UBERON:0007284!2.04e-13!86;UBERON:0003056!4.69e-13!61;UBERON:0001869!5.25e-13!32;UBERON:0002020!1.09e-12!34;UBERON:0003528!1.09e-12!34;UBERON:0000955!1.61e-12!69;UBERON:0006238!1.61e-12!69;UBERON:0001893!1.96e-12!34;UBERON:0002616!2.98e-12!59;UBERON:0002791!3.59e-12!33;UBERON:0000924!3.71e-12!173;UBERON:0006601!3.71e-12!173;UBERON:0000033!4.78e-12!123;UBERON:0004121!3.53e-11!169;UBERON:0000153!4.55e-11!129;UBERON:0007811!4.55e-11!129;UBERON:0000956!3.46e-10!25;UBERON:0000203!3.46e-10!25;UBERON:0002619!7.68e-10!22;UBERON:0001950!7.54e-09!20;UBERON:0000468!6.27e-08!659;UBERON:0000475!8.23e-08!365;UBERON:0000467!7.43e-07!625;UBERON:0000480!8.33e-07!626 | |ontology_enrichment_uberon=UBERON:0000073!7.85e-16!94;UBERON:0001016!7.85e-16!94;UBERON:0002780!2.64e-15!41;UBERON:0001890!2.64e-15!41;UBERON:0006240!2.64e-15!41;UBERON:0005743!3.40e-15!86;UBERON:0001017!6.49e-15!82;UBERON:0003080!1.27e-14!42;UBERON:0002346!1.29e-14!90;UBERON:0001049!1.35e-14!57;UBERON:0005068!1.35e-14!57;UBERON:0006241!1.35e-14!57;UBERON:0007135!1.35e-14!57;UBERON:0003075!2.04e-13!86;UBERON:0007284!2.04e-13!86;UBERON:0003056!4.69e-13!61;UBERON:0001869!5.25e-13!32;UBERON:0002020!1.09e-12!34;UBERON:0003528!1.09e-12!34;UBERON:0000955!1.61e-12!69;UBERON:0006238!1.61e-12!69;UBERON:0001893!1.96e-12!34;UBERON:0002616!2.98e-12!59;UBERON:0002791!3.59e-12!33;UBERON:0000924!3.71e-12!173;UBERON:0006601!3.71e-12!173;UBERON:0000033!4.78e-12!123;UBERON:0004121!3.53e-11!169;UBERON:0000153!4.55e-11!129;UBERON:0007811!4.55e-11!129;UBERON:0000956!3.46e-10!25;UBERON:0000203!3.46e-10!25;UBERON:0002619!7.68e-10!22;UBERON:0001950!7.54e-09!20;UBERON:0000468!6.27e-08!659;UBERON:0000475!8.23e-08!365;UBERON:0000467!7.43e-07!625;UBERON:0000480!8.33e-07!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;6.19e-12;32!UBERON:0002780;1.75e-11;41!UBERON:0001890;1.75e-11;41!UBERON:0002791;2.34e-11;32!UBERON:0003528;2.57e-11;34!UBERON:0002020;2.57e-11;34!UBERON:0001893;5.91e-11;34!UBERON:0000956;3.65e-10;25!UBERON:0000203;3.65e-10;25!UBERON:0002619;1.01e-09;22!UBERON:0000073;4.68e-09;53!UBERON:0002616;4.68e-09;53!UBERON:0001950;9.83e-09;20 | |||
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| ||
|short_description=p3@CCPG1,p3@DYX1C1-CCPG1,p3@DYX1C1 | |short_description=p3@CCPG1,p3@DYX1C1-CCPG1,p3@DYX1C1 | ||
}} | }} |
Latest revision as of 04:20, 18 September 2015
Short description: | p3@CCPG1, p3@DYX1C1-CCPG1, p3@DYX1C1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CCPG1_5end, CAGE_peak_3_at_DYX1C1-CCPG1_5end, CAGE_peak_3_at_DYX1C1_5end |
Coexpression cluster: | C3459_lung_pituitary_trachea_testis_medulla_caudate_glassy |
Association with transcript: | 0bp_to_ENST00000420792, ENST00000448430, ENST00000457155, ENST00000519017, ENST00000522437, ENST00000524160_5end |
EntrezGene: | 161582,9236 |
HGNC: | 24227, 43019&submit=Submit 21493, 24227, 43019 |
UniProt: | Q8WXU2E5RJ13B4DY92 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.51e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
nervous system | 6.68e-16 | 89 |
regional part of forebrain | 2.43e-15 | 41 |
forebrain | 2.43e-15 | 41 |
anterior neural tube | 2.43e-15 | 41 |
future forebrain | 2.43e-15 | 41 |
central nervous system | 2.69e-15 | 81 |
neural tube | 3.54e-15 | 56 |
neural rod | 3.54e-15 | 56 |
future spinal cord | 3.54e-15 | 56 |
neural keel | 3.54e-15 | 56 |
regional part of nervous system | 1.91e-14 | 53 |
regional part of brain | 1.91e-14 | 53 |
neurectoderm | 1.05e-13 | 86 |
pre-chordal neural plate | 1.84e-13 | 61 |
cerebral hemisphere | 4.91e-13 | 32 |
brain | 6.85e-13 | 68 |
future brain | 6.85e-13 | 68 |
brain grey matter | 1.02e-12 | 34 |
gray matter | 1.02e-12 | 34 |
neural plate | 1.61e-12 | 82 |
presumptive neural plate | 1.61e-12 | 82 |
telencephalon | 1.84e-12 | 34 |
regional part of telencephalon | 3.82e-12 | 32 |
ectoderm-derived structure | 5.30e-11 | 171 |
ectoderm | 5.30e-11 | 171 |
presumptive ectoderm | 5.30e-11 | 171 |
cerebral cortex | 3.28e-10 | 25 |
pallium | 3.28e-10 | 25 |
structure with developmental contribution from neural crest | 4.90e-10 | 132 |
ecto-epithelium | 5.59e-10 | 104 |
regional part of cerebral cortex | 7.31e-10 | 22 |
organ system subdivision | 1.92e-09 | 223 |
neocortex | 7.22e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.06e-15 | 143 |
carcinoma | 3.47e-13 | 106 |
disease of cellular proliferation | 3.30e-09 | 239 |
cancer | 1.02e-08 | 235 |