FFCP PHASE1:Hg19::chr11:47615858..47615865,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114900 | |EntrezGene=114900 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14346 | |HGNC=14346 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BXJ3 | |UniProt=Q9BXJ3 | ||
|association_with_transcript=95bp_to_NM_031909,uc001ngc.2_5end | |association_with_transcript=95bp_to_NM_031909,uc001ngc.2_5end | ||
|cluster_id=chr11:47615858..47615865,- | |||
|coexpression_cluster_id=C3158 | |||
|description=CAGE_peak_9_at_C1QTNF4_5end | |description=CAGE_peak_9_at_C1QTNF4_5end | ||
|id=chr11:47615858..47615865,- | |id=chr11:47615858..47615865,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002032;6.44e-16;1!CL:0000557;6.44e-16;1!CL:0000037;1.07e-15;1!CL:0001024;1.07e-15;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0001024,1.16e-15,1 | |||
|ontology_enrichment_development_v019=UBERON:0006222;1.66e-15;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.09e-57!57;UBERON:0005068!1.09e-57!57;UBERON:0006241!1.09e-57!57;UBERON:0007135!1.09e-57!57;UBERON:0001017!1.73e-50!82;UBERON:0002616!1.72e-48!59;UBERON:0005743!9.70e-48!86;UBERON:0000955!1.25e-45!69;UBERON:0006238!1.25e-45!69;UBERON:0000073!2.19e-42!94;UBERON:0001016!2.19e-42!94;UBERON:0003075!7.47e-38!86;UBERON:0007284!7.47e-38!86;UBERON:0001893!2.62e-36!34;UBERON:0002020!2.88e-36!34;UBERON:0003528!2.88e-36!34;UBERON:0007023!4.03e-36!115;UBERON:0002780!6.75e-36!41;UBERON:0001890!6.75e-36!41;UBERON:0006240!6.75e-36!41;UBERON:0002346!8.66e-36!90;UBERON:0003080!6.43e-35!42;UBERON:0002791!9.91e-34!33;UBERON:0001869!1.34e-31!32;UBERON:0001950!1.06e-27!20;UBERON:0002619!5.42e-25!22;UBERON:0003076!1.34e-24!15;UBERON:0003057!1.34e-24!15;UBERON:0000153!8.60e-24!129;UBERON:0007811!8.60e-24!129;UBERON:0000033!1.17e-23!123;UBERON:0003056!2.40e-22!61;UBERON:0000956!1.03e-21!25;UBERON:0000203!1.03e-21!25;UBERON:0004733!7.63e-21!12;UBERON:0002028!7.63e-21!12;UBERON:0007277!7.63e-21!12;UBERON:0004121!1.26e-19!169;UBERON:0002298!2.41e-19!8;UBERON:0004732!4.17e-19!13;UBERON:0000924!5.83e-19!173;UBERON:0006601!5.83e-19!173;UBERON:0002308!4.09e-17!9;UBERON:0000125!4.09e-17!9;UBERON:0002420!4.52e-17!9;UBERON:0007245!4.52e-17!9;UBERON:0010009!4.52e-17!9;UBERON:0010011!4.52e-17!9;UBERON:0000454!4.52e-17!9;UBERON:0001871!4.23e-14!7;UBERON:0000025!6.54e-14!194;UBERON:0000200!2.46e-13!6;UBERON:0002680!7.77e-13!9;UBERON:0001895!7.77e-13!9;UBERON:0010092!7.77e-13!9;UBERON:0009663!1.29e-11!7;UBERON:0000988!8.37e-11!3;UBERON:0001896!1.68e-10!3;UBERON:0005290!1.68e-10!3;UBERON:0010096!1.68e-10!3;UBERON:0006331!2.56e-10!3;UBERON:0002771!6.50e-10!3;UBERON:0004111!1.64e-09!241;UBERON:0000369!4.18e-08!4;UBERON:0002435!4.18e-08!4;UBERON:0000204!4.18e-08!4;UBERON:0010082!4.18e-08!4;UBERON:0000477!5.42e-08!286;UBERON:0002148!1.27e-07!2;UBERON:0009662!1.27e-07!2;UBERON:0001876!1.46e-07!2;UBERON:0000483!2.44e-07!309;UBERON:0000119!3.48e-07!312 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,4.24e-09,15;UBERON:0003057,4.24e-09,15;UBERON:0001049,1.22e-08,56;UBERON:0005068,1.22e-08,56;UBERON:0006241,1.22e-08,56;UBERON:0007135,1.22e-08,56;UBERON:0001017,7.63e-08,81;UBERON:0001016,5.07e-07,89;UBERON:0000955,5.40e-07,68;UBERON:0006238,5.40e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.22960483268332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,2.63384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.36215036370627,0,9.73865820823666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,4.84666373047609,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.110579259931225,3.54657142744257,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,2.10838001152805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.50648636764703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,7.66479528401834,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,1.14681839138014,0.110929051536852,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0.159633859057151,2.46139637088906,0,0.899044282034833,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.810451015420736,0,0.413373593002368,0.634158101939068,0,0,0.992422356778588,0,0,0.535701835878287,0,0,0,0,0,0,0.815636795721981,0.591954962065642,0,0,0,0.785577949580009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0.198950775161368,0,0,0,0,0,0.218559560503957,0,0,0,0.196308467114945,0,2.5359343655004,0,0,0,0,0,0,0,0.730336388246517,0,0.143339583151451,0,1.15585533324555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714193294391221,0,0,0,0,1.0105859447911,0,0,0,0,0,0,0,0,0,0,0,0.813792356631477,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.22960483268332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,2.63384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.36215036370627,0,9.73865820823666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,4.84666373047609,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.110579259931225,3.54657142744257,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,2.10838001152805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.50648636764703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,7.66479528401834,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,1.14681839138014,0.110929051536852,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0.159633859057151,2.46139637088906,0,0.899044282034833,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.810451015420736,0,0.413373593002368,0.634158101939068,0,0,0.992422356778588,0,0,0.535701835878287,0,0,0,0,0,0,0.815636795721981,0.591954962065642,0,0,0,0.785577949580009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0.198950775161368,0,0,0,0,0,0.218559560503957,0,0,0,0.196308467114945,0,2.5359343655004,0,0,0,0,0,0,0,0.730336388246517,0,0.143339583151451,0,1.15585533324555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714193294391221,0,0,0,0,1.0105859447911,0,0,0,0,0,0,0,0,0,0,0,0.813792356631477,0,0.201273793591026,0 | ||
|short_description=p9@C1QTNF4 | |short_description=p9@C1QTNF4 | ||
}} | }} |
Latest revision as of 06:04, 18 September 2015
Short description: | p9@C1QTNF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_C1QTNF4_5end |
Coexpression cluster: | C3158_acute_CD133_granulocyte_brain_cerebellum_diencephalon_CD34 |
Association with transcript: | 95bp_to_NM_031909, uc001ngc.2_5end |
EntrezGene: | C1QTNF4 |
HGNC: | 14346 |
UniProt: | Q9BXJ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 1.16e-15 | 1 |
Ontology term | p-value | n |
---|---|---|
posterior neural tube | 4.24e-09 | 15 |
chordal neural plate | 4.24e-09 | 15 |
neural tube | 1.22e-08 | 56 |
neural rod | 1.22e-08 | 56 |
future spinal cord | 1.22e-08 | 56 |
neural keel | 1.22e-08 | 56 |
central nervous system | 7.63e-08 | 81 |
nervous system | 5.07e-07 | 89 |
brain | 5.40e-07 | 68 |
future brain | 5.40e-07 | 68 |