FFCP PHASE1:Hg19::chr4:68995571..68995593,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:68995571..68995593,-
|short_description=p1@TMPRSS11F
|description=CAGE_peak_1_at_TMPRSS11F_5end
|association_with_transcript=0bp_to_NM_207407,uc003hdt.1_5e...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=389208 | |EntrezGene=389208 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29994 | |HGNC=29994 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZWK6 | |UniProt=Q6ZWK6 | ||
|association_with_transcript=0bp_to_NM_207407,uc003hdt.1_5end | |||
|cluster_id=chr4:68995571..68995593,- | |||
|coexpression_cluster_id=C820 | |||
|description=CAGE_peak_1_at_TMPRSS11F_5end | |||
|id=chr4:68995571..68995593,- | |||
|ontology_enrichment_celltype=CL:0002076!2.76e-18!43;CL:0002251!5.05e-14!21;CL:0000223!1.97e-13!59;CL:0002621!1.03e-09!3;CL:0002368!2.52e-09!13;CL:0000622!2.77e-09!5;CL:0002623!3.68e-09!3;CL:0000154!9.91e-08!6;CL:0000150!1.64e-07!9;CL:0002159!5.41e-07!13;CL:0000066!6.21e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002621;1.67e-14;3!CL:0002537;5.95e-09;5!CL:0000197;1.74e-07;6!CL:0000098;1.74e-07;6!CL:0002167;1.74e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,1.73e-14,3;CL:0002537,6.19e-09,5;CL:0000197,1.68e-07,6;CL:0000098,1.68e-07,6;CL:0002167,1.68e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0009143;9.57e-12;1!UBERON:0003124;4.67e-11;1 | |||
|ontology_enrichment_disease=DOID:1749!7.52e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:178;2.54e-11;1!DOID:326;2.54e-11;1!DOID:3978;2.54e-11;1!DOID:3394;2.54e-11;1!DOID:5844;2.54e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:178,2.96e-11,1;DOID:326,2.96e-11,1;DOID:3978,2.96e-11,1;DOID:3394,2.96e-11,1;DOID:5844,2.96e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0000166!3.06e-17!21;UBERON:0000165!1.78e-14!28;UBERON:0000930!1.78e-14!28;UBERON:0001004!2.85e-14!72;UBERON:0000161!1.60e-12!35;UBERON:0000974!2.87e-12!10;UBERON:0000344!2.20e-10!12;UBERON:0001444!8.27e-10!48;UBERON:0001949!1.03e-09!3;UBERON:0003729!4.17e-09!5;UBERON:0004119!3.39e-08!169;UBERON:0000925!3.39e-08!169;UBERON:0006595!3.39e-08!169;UBERON:0003102!1.22e-07!95;UBERON:0000065!7.12e-07!53;UBERON:0005631!8.18e-07!14;UBERON:0000158!8.18e-07!14;UBERON:0001042!8.47e-07!10;UBERON:0009145!8.47e-07!10;UBERON:0000341!9.89e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.67e-14;3!UBERON:0002372;1.31e-11;1!UBERON:0001961;1.31e-11;1!UBERON:0001744;1.31e-11;1!UBERON:0001042;1.31e-11;1!UBERON:0001735;1.31e-11;1!UBERON:0005795;2.54e-11;1!UBERON:0007029;2.54e-11;1!UBERON:0000165;5.77e-09;28!UBERON:0000161;9.54e-09;19!UBERON:0000166;9.54e-09;19!UBERON:0000002;1.01e-07;6!UBERON:0001560;1.01e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.73e-14,3;UBERON:0002372,1.31e-11,1;UBERON:0001961,1.31e-11,1;UBERON:0001744,1.31e-11,1;UBERON:0001735,1.31e-11,1;UBERON:0000166,1.84e-11,22;UBERON:0007029,2.68e-11,1;UBERON:0000165,1.16e-08,29;UBERON:0000930,1.16e-08,29;UBERON:0000002,9.26e-08,6;UBERON:0001560,9.26e-08,6;UBERON:0005795,1.63e-07,22;UBERON:0000161,6.07e-07,36;UBERON:0005631,6.17e-07,14;UBERON:0000158,6.17e-07,14 | |||
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| 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| ||
|short_description=p1@TMPRSS11F | |||
}} | }} |
Latest revision as of 07:25, 18 September 2015
Short description: | p1@TMPRSS11F |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMPRSS11F_5end |
Coexpression cluster: | C820_cervical_tongue_esophagus_throat_tonsil_oral_uterus |
Association with transcript: | 0bp_to_NM_207407, uc003hdt.1_5end |
EntrezGene: | TMPRSS11F |
HGNC: | 29994 |
UniProt: | Q6ZWK6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 1.73e-14 | 3 |
amnion mesenchymal stem cell | 6.19e-09 | 5 |
receptor cell | 1.68e-07 | 6 |
sensory epithelial cell | 1.68e-07 | 6 |
olfactory epithelial cell | 1.68e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 1.73e-14 | 3 |
tonsil | 1.31e-11 | 1 |
mucosa-associated lymphoid tissue | 1.31e-11 | 1 |
lymphoid tissue | 1.31e-11 | 1 |
tonsillar ring | 1.31e-11 | 1 |
oral opening | 1.84e-11 | 22 |
surface | 2.68e-11 | 1 |
mouth | 1.16e-08 | 29 |
stomodeum | 1.16e-08 | 29 |
uterine cervix | 9.26e-08 | 6 |
neck of organ | 9.26e-08 | 6 |
embryonic uterus | 1.63e-07 | 22 |
orifice | 6.07e-07 | 36 |
extraembryonic membrane | 6.17e-07 | 14 |
membranous layer | 6.17e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 2.96e-11 | 1 |
ischemia | 2.96e-11 | 1 |
extrinsic cardiomyopathy | 2.96e-11 | 1 |
myocardial ischemia | 2.96e-11 | 1 |
myocardial infarction | 2.96e-11 | 1 |