FFCP PHASE1:Hg19::chr19:4279647..4279659,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56961 | |EntrezGene=56961 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30633 | |HGNC=30633 | ||
|TSSclassifier=strong | |||
|UniProt=Q96IW2 | |UniProt=Q96IW2 | ||
|association_with_transcript=0bp_to_AK055673_5end | |association_with_transcript=0bp_to_AK055673_5end | ||
|cluster_id=chr19:4279647..4279659,+ | |||
|coexpression_cluster_id=C102 | |coexpression_cluster_id=C102 | ||
|description=CAGE_peak_9_at_SHD_5end | |description=CAGE_peak_9_at_SHD_5end | ||
|id=chr19:4279647..4279659,+ | |id=chr19:4279647..4279659,+ | ||
|ontology_enrichment_celltype=CL:0000784!2.50e-11!3;CL:0000188!2.34e-09!9;CL:0000242!5.59e-08!2 | |ontology_enrichment_celltype=CL:0000784!2.50e-11!3;CL:0000188!2.34e-09!9;CL:0000242!5.59e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000784;2.59e-12;3!CL:0000333;5.35e-08;5!CL:0000840;8.48e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,3.24e-12,3;CL:0000840,9.49e-07,5;CL:0001029,9.49e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:169;7.17e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,7.17e-07,6 | |||
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| ||
|short_description=p9@SHD | |short_description=p9@SHD | ||
}} | }} |
Latest revision as of 08:45, 18 September 2015
Short description: | p9@SHD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SHD_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | 0bp_to_AK055673_5end |
EntrezGene: | SHD |
HGNC: | 30633 |
UniProt: | Q96IW2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 3.24e-12 | 3 |
immature conventional dendritic cell | 9.49e-07 | 5 |
common dendritic progenitor | 9.49e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
middle frontal gyrus | 9.07e-18 | 2 |
globus pallidus | 1.07e-17 | 2 |
pallidum | 1.07e-17 | 2 |
frontal cortex | 2.59e-12 | 3 |
regional part of telencephalon | 9.60e-10 | 32 |
cerebral hemisphere | 9.60e-10 | 32 |
brain grey matter | 3.15e-09 | 34 |
gray matter | 3.15e-09 | 34 |
telencephalon | 3.15e-09 | 34 |
sympathetic nervous system | 5.35e-08 | 5 |
autonomic nervous system | 5.35e-08 | 5 |
occipital lobe | 6.13e-08 | 5 |
regional part of forebrain | 8.32e-08 | 41 |
forebrain | 8.32e-08 | 41 |
anterior neural tube | 8.32e-08 | 41 |
future forebrain | 8.32e-08 | 41 |
neocortex | 2.77e-07 | 20 |
gyrus | 8.48e-07 | 6 |
regional part of cerebral cortex | 9.95e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 7.17e-07 | 6 |