FFCP PHASE1:Hg19::chr15:59903999..59904006,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:59903999..59904006,+
|short_description=p13@GCNT3
|description=CAGE_peak_13_at_GCNT3_5end
|association_with_transcript=16bp_to_ENST00000396065,ENST0000056...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9245 | |EntrezGene=9245 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4205 | |HGNC=4205 | ||
|TSSclassifier=strong | |||
|UniProt=O95395 | |UniProt=O95395 | ||
|association_with_transcript=16bp_to_ENST00000396065,ENST00000560585_5end | |||
|cluster_id=chr15:59903999..59904006,+ | |||
|coexpression_cluster_id=C1211 | |||
|description=CAGE_peak_13_at_GCNT3_5end | |||
|id=chr15:59903999..59904006,+ | |||
|ontology_enrichment_celltype=CL:1000507!8.84e-07!12;CL:1000494!8.84e-07!12 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009497;1.08e-15;13!UBERON:0006242;1.10e-13;1!UBERON:0004161;8.39e-11;11!UBERON:0001041;5.61e-07;30!UBERON:0006595;8.06e-07;86 | |||
|ontology_enrichment_disease=DOID:305!4.95e-10!106;DOID:4929!8.43e-08!2;DOID:0050687!1.07e-07!143;DOID:299!1.74e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:4929;1.75e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,1.64e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0005409!1.05e-13!35;UBERON:0000160!5.02e-13!27;UBERON:0004921!2.39e-09!129;UBERON:0004185!2.39e-09!129;UBERON:0005172!6.00e-09!55;UBERON:0005173!6.00e-09!55;UBERON:0001007!1.72e-08!155;UBERON:0001555!1.72e-08!155;UBERON:0007026!1.72e-08!155;UBERON:0002294!4.96e-08!7;UBERON:0001173!4.96e-08!7;UBERON:0004912!4.96e-08!7;UBERON:0000059!6.73e-08!11;UBERON:0002417!9.15e-08!61;UBERON:0000916!9.15e-08!61;UBERON:0009497!1.16e-07!25;UBERON:0000015!1.16e-07!25;UBERON:0002423!1.16e-07!25;UBERON:0006235!1.16e-07!25;UBERON:0004161!1.16e-07!25;UBERON:0004119!2.68e-07!169;UBERON:0000925!2.68e-07!169;UBERON:0006595!2.68e-07!169;UBERON:0009773!8.84e-07!12;UBERON:0001231!8.84e-07!12;UBERON:0004810!8.84e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;6.73e-26;22!UBERON:0000160;1.37e-24;17!UBERON:0002108;4.35e-23;4!UBERON:0004921;9.68e-16;33!UBERON:0001155;4.50e-13;9!UBERON:0000059;8.39e-11;11!UBERON:0002423;2.82e-08;25!UBERON:0002294;4.19e-08;7!UBERON:0001173;4.19e-08;7!UBERON:0001555;6.99e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.34e-24,17;UBERON:0005409,6.81e-23,25;UBERON:0002108,6.83e-23,4;UBERON:0001155,3.44e-13,9;UBERON:0004921,2.34e-11,118;UBERON:0000059,6.75e-11,11;UBERON:0001007,8.40e-11,145;UBERON:0001555,8.40e-11,145;UBERON:0007026,8.40e-11,145;UBERON:0004119,1.19e-09,160;UBERON:0000925,1.19e-09,160;UBERON:0006595,1.19e-09,160;UBERON:0009497,3.11e-08,25;UBERON:0000015,3.11e-08,25;UBERON:0002423,3.11e-08,25;UBERON:0006235,3.11e-08,25;UBERON:0004161,3.11e-08,25 | |||
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| ||
|short_description=p13@GCNT3 | |||
}} | }} |
Latest revision as of 09:03, 18 September 2015
Short description: | p13@GCNT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_GCNT3_5end |
Coexpression cluster: | C1211_small_lung_bile_clear_colon_rectal_tubular |
Association with transcript: | 16bp_to_ENST00000396065, ENST00000560585_5end |
EntrezGene: | GCNT3 |
HGNC: | 4205 |
UniProt: | O95395 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.34e-24 | 17 |
gastrointestinal system | 6.81e-23 | 25 |
small intestine | 6.83e-23 | 4 |
colon | 3.44e-13 | 9 |
subdivision of digestive tract | 2.34e-11 | 118 |
large intestine | 6.75e-11 | 11 |
digestive system | 8.40e-11 | 145 |
digestive tract | 8.40e-11 | 145 |
primitive gut | 8.40e-11 | 145 |
endoderm-derived structure | 1.19e-09 | 160 |
endoderm | 1.19e-09 | 160 |
presumptive endoderm | 1.19e-09 | 160 |
epithelium of foregut-midgut junction | 3.11e-08 | 25 |
anatomical boundary | 3.11e-08 | 25 |
hepatobiliary system | 3.11e-08 | 25 |
foregut-midgut junction | 3.11e-08 | 25 |
septum transversum | 3.11e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 1.64e-07 | 2 |