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FFCP PHASE1:Hg19::chr2:176994077..176994091,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=3234
|EntrezGene=3234
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=5139
|HGNC=5139
|TSSclassifier=strong
|UniProt=F8WBG7
|UniProt=F8WBG7
|association_with_transcript=-330bp_to_ENST00000429017,NM_001199747,uc002ukn.2_5end
|association_with_transcript=-330bp_to_ENST00000429017,NM_001199747,uc002ukn.2_5end
|cluster_id=chr2:176994077..176994091,+
|coexpression_cluster_id=C148
|description=CAGE_peak_8_at_HOXD8_5end
|description=CAGE_peak_8_at_HOXD8_5end
|id=chr2:176994077..176994091,+
|id=chr2:176994077..176994091,+
|ontology_enrichment_celltype=CL:1000507!5.05e-17!12;CL:1000494!5.05e-17!12;CL:1000449!5.99e-13!16;CL:1000497!1.38e-11!18;CL:0002518!1.38e-11!18;CL:0000239!1.12e-08!3;CL:1000615!1.12e-08!3;CL:0002306!1.12e-08!3;CL:0002681!1.09e-07!13;CL:0002584!1.09e-07!13
|ontology_enrichment_celltype=CL:1000507!5.05e-17!12;CL:1000494!5.05e-17!12;CL:1000449!5.99e-13!16;CL:1000497!1.38e-11!18;CL:0002518!1.38e-11!18;CL:0000239!1.12e-08!3;CL:1000615!1.12e-08!3;CL:0002306!1.12e-08!3;CL:0002681!1.09e-07!13;CL:0002584!1.09e-07!13
|ontology_enrichment_celltype_v019=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_development_v019=UBERON:0003918;2.00e-40;10!UBERON:0007687;2.00e-40;10!UBERON:0003104;1.90e-14;31
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon=UBERON:0002113!1.48e-20!27;UBERON:0003918!1.48e-20!27;UBERON:0005095!1.48e-20!27;UBERON:0007687!1.48e-20!27;UBERON:0000489!2.17e-17!32;UBERON:0009773!5.05e-17!12;UBERON:0001231!5.05e-17!12;UBERON:0004810!5.05e-17!12;UBERON:0004211!5.99e-13!16;UBERON:0001285!5.99e-13!16;UBERON:0007684!5.99e-13!16;UBERON:0003220!5.99e-13!16;UBERON:0004208!5.99e-13!16;UBERON:0006554!1.04e-12!44;UBERON:0001008!1.97e-12!45;UBERON:0006555!3.15e-12!17;UBERON:0005103!3.15e-12!17;UBERON:0000083!3.15e-12!17;UBERON:0009201!3.15e-12!17;UBERON:0004819!3.15e-12!17;UBERON:0006553!3.15e-12!17;UBERON:0003074!3.15e-12!17;UBERON:0003060!3.15e-12!17;UBERON:0000080!1.38e-11!18;UBERON:0002120!1.38e-11!18;UBERON:0004875!1.38e-11!18;UBERON:0005721!1.38e-11!18;UBERON:0005754!1.38e-11!18;UBERON:0007297!1.38e-11!18;UBERON:0004876!1.71e-10!20;UBERON:0005172!3.33e-10!55;UBERON:0005173!3.33e-10!55;UBERON:0003887!5.03e-10!21;UBERON:0002417!3.25e-09!61;UBERON:0000916!3.25e-09!61;UBERON:0006853!1.12e-08!3;UBERON:0007685!1.12e-08!3;UBERON:0004134!1.12e-08!3;UBERON:0000058!3.24e-08!26;UBERON:0003103!3.69e-08!69;UBERON:0001225!1.09e-07!13;UBERON:0008987!1.09e-07!13;UBERON:0005177!2.09e-07!107;UBERON:0009569!5.24e-07!113
|ontology_enrichment_uberon_v019=UBERON:0002113;1.03e-17;24!UBERON:0011143;1.03e-17;24!UBERON:0000489;6.74e-15;29!UBERON:0006554;1.90e-14;30!UBERON:0001008;1.90e-14;30!UBERON:0005172;1.47e-07;52!UBERON:0005173;1.47e-07;52
|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.86e-16,26;UBERON:0003918,1.86e-16,26;UBERON:0011143,1.86e-16,26;UBERON:0005095,1.86e-16,26;UBERON:0007687,1.86e-16,26;UBERON:0000489,5.04e-14,31;UBERON:0006554,1.08e-09,47;UBERON:0001008,1.62e-09,48;UBERON:0005172,1.34e-08,54;UBERON:0005173,1.34e-08,54;UBERON:0002417,7.34e-08,60;UBERON:0000916,7.34e-08,60;UBERON:0003103,4.47e-07,68
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|short_description=p8@HOXD8
|short_description=p8@HOXD8
}}
}}

Latest revision as of 09:07, 18 September 2015

Short description:p8@HOXD8
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_8_at_HOXD8_5end
Coexpression cluster:C148_kidney_small_epididymis_pancreas_serous_duodenum_temporal
Association with transcript: -330bp_to_ENST00000429017, NM_001199747, uc002ukn.2_5end
EntrezGene:HOXD8
HGNC: 5139
UniProt: F8WBG7
Genome view:ZENBU


View on UCSC genome browser

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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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