FFCP PHASE1:Hg19::chr10:49813051..49813064,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58504 | |EntrezGene=58504 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30320 | |HGNC=30320 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-51bp_to_ENST00000491108_5end | |association_with_transcript=-51bp_to_ENST00000491108_5end | ||
|cluster_id=chr10:49813051..49813064,- | |||
|coexpression_cluster_id=C2062 | |coexpression_cluster_id=C2062 | ||
|description=CAGE_peak_4_at_ARHGAP22_5end | |description=CAGE_peak_4_at_ARHGAP22_5end | ||
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|ontology_enrichment_celltype=CL:0000055!1.09e-32!180;CL:0000359!8.31e-25!32;CL:0000680!6.94e-24!57;CL:0000056!6.94e-24!57;CL:0000355!6.94e-24!57;CL:0000192!3.84e-23!42;CL:0000514!3.84e-23!42;CL:0000183!1.73e-22!59;CL:0000187!4.03e-21!54;CL:0000393!1.33e-17!60;CL:0000211!1.33e-17!60;CL:0000057!8.70e-17!75;CL:0000222!3.44e-14!119;CL:0000048!1.45e-13!430;CL:0000723!7.70e-13!436;CL:0002539!1.70e-12!10;CL:0000034!6.49e-12!444;CL:0002620!9.83e-12!23;CL:0002371!1.81e-11!591;CL:0000144!4.27e-09!625;CL:0002551!4.33e-07!6 | |ontology_enrichment_celltype=CL:0000055!1.09e-32!180;CL:0000359!8.31e-25!32;CL:0000680!6.94e-24!57;CL:0000056!6.94e-24!57;CL:0000355!6.94e-24!57;CL:0000192!3.84e-23!42;CL:0000514!3.84e-23!42;CL:0000183!1.73e-22!59;CL:0000187!4.03e-21!54;CL:0000393!1.33e-17!60;CL:0000211!1.33e-17!60;CL:0000057!8.70e-17!75;CL:0000222!3.44e-14!119;CL:0000048!1.45e-13!430;CL:0000723!7.70e-13!436;CL:0002539!1.70e-12!10;CL:0000034!6.49e-12!444;CL:0002620!9.83e-12!23;CL:0002371!1.81e-11!591;CL:0000144!4.27e-09!625;CL:0002551!4.33e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000359;5.51e-50;32!CL:0000192;2.87e-30;43!CL:0002539;1.56e-27;10!CL:0000187;2.90e-16;55!CL:0000056;4.19e-12;4!CL:0000393;7.65e-12;61!CL:0000211;7.65e-12;61!CL:0002594;7.95e-12;4!CL:0002595;2.39e-09;5!CL:0002582;2.79e-09;3!CL:0000515;2.91e-09;3!CL:0002592;3.38e-09;3!CL:0002551;2.83e-07;6!CL:0000680;6.97e-07;7 | |ontology_enrichment_celltype_v019=CL:0000359;5.51e-50;32!CL:0000192;2.87e-30;43!CL:0002539;1.56e-27;10!CL:0000187;2.90e-16;55!CL:0000056;4.19e-12;4!CL:0000393;7.65e-12;61!CL:0000211;7.65e-12;61!CL:0002594;7.95e-12;4!CL:0002595;2.39e-09;5!CL:0002582;2.79e-09;3!CL:0000515;2.91e-09;3!CL:0002592;3.38e-09;3!CL:0002551;2.83e-07;6!CL:0000680;6.97e-07;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.96e-53,32;CL:0000192,6.71e-41,43;CL:0000514,6.71e-41,43;CL:0000680,7.88e-39,58;CL:0000056,7.88e-39,58;CL:0000355,7.88e-39,58;CL:0000187,5.28e-33,55;CL:0000393,5.82e-29,61;CL:0000211,5.82e-29,61;CL:0002539,1.43e-27,10;CL:0000048,1.46e-17,427;CL:0000723,4.26e-17,433;CL:0000034,1.71e-16,441;CL:0000222,3.09e-15,121;CL:0000515,4.83e-12,4;CL:0002594,5.88e-12,4;CL:0002595,2.19e-09,5;CL:0002582,2.91e-09,3;CL:0002592,3.08e-09,3;CL:0000057,1.22e-07,76;CL:0002551,2.65e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000514;2.87e-30;43!CL:0000355;2.16e-19;58!CL:0000515;4.19e-12;4 | |ontology_enrichment_development_v019=CL:0000514;2.87e-30;43!CL:0000355;2.16e-19;58!CL:0000515;4.19e-12;4 | ||
|ontology_enrichment_disease=DOID:2394!5.39e-08!14 | |ontology_enrichment_disease=DOID:2394!5.39e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.13e-13;14!DOID:0060084;6.65e-10;3!DOID:127;6.65e-10;3!DOID:120;6.76e-08;27!DOID:0060072;1.69e-07;4!DOID:193;3.22e-07;29 | |ontology_enrichment_disease_v019=DOID:2394;1.13e-13;14!DOID:0060084;6.65e-10;3!DOID:127;6.65e-10;3!DOID:120;6.76e-08;27!DOID:0060072;1.69e-07;4!DOID:193;3.22e-07;29 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,1.39e-13,14;DOID:0060084,6.86e-10,3;DOID:127,6.86e-10,3;DOID:120,7.44e-08,27;DOID:0060072,1.73e-07,4;DOID:193,3.52e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0001637!6.04e-29!42;UBERON:0003509!6.04e-29!42;UBERON:0004572!6.04e-29!42;UBERON:0000914!2.67e-27!83;UBERON:0002329!2.67e-27!83;UBERON:0003077!2.67e-27!83;UBERON:0003059!2.67e-27!83;UBERON:0007282!2.67e-27!83;UBERON:0009618!2.67e-27!83;UBERON:0007285!2.67e-27!83;UBERON:0004290!2.47e-24!70;UBERON:0004573!6.35e-23!33;UBERON:0004571!6.35e-23!33;UBERON:0001134!2.69e-21!61;UBERON:0002036!2.69e-21!61;UBERON:0003082!2.69e-21!61;UBERON:0002385!4.51e-21!63;UBERON:0001015!4.51e-21!63;UBERON:0000383!4.51e-21!63;UBERON:0001981!2.33e-20!60;UBERON:0007500!2.33e-20!60;UBERON:0004537!2.33e-20!60;UBERON:0006965!2.33e-20!60;UBERON:0000486!4.34e-20!82;UBERON:0000055!5.17e-19!69;UBERON:0004872!5.34e-17!84;UBERON:0002049!1.58e-16!79;UBERON:0007798!1.58e-16!79;UBERON:0000947!6.44e-15!21;UBERON:0010191!6.44e-15!21;UBERON:0005256!1.57e-13!143;UBERON:0003914!6.37e-13!118;UBERON:0004535!9.60e-13!110;UBERON:0004237!1.70e-12!10;UBERON:0004695!1.70e-12!10;UBERON:0002111!1.70e-12!10;UBERON:0004178!1.70e-12!10;UBERON:0001009!5.60e-12!113;UBERON:0002204!1.76e-10!167;UBERON:0000025!8.19e-10!194;UBERON:0001135!1.59e-09!15;UBERON:0000490!4.40e-09!138;UBERON:0002199!1.48e-08!45;UBERON:0002416!1.48e-08!45;UBERON:0004111!3.91e-08!241;UBERON:0000119!5.48e-08!312;UBERON:0000483!6.34e-08!309;UBERON:0000475!1.46e-07!365;UBERON:0000477!2.27e-07!286;UBERON:0002097!2.55e-07!40;UBERON:0000467!4.42e-07!625;UBERON:0000480!5.31e-07!626 | |ontology_enrichment_uberon=UBERON:0001637!6.04e-29!42;UBERON:0003509!6.04e-29!42;UBERON:0004572!6.04e-29!42;UBERON:0000914!2.67e-27!83;UBERON:0002329!2.67e-27!83;UBERON:0003077!2.67e-27!83;UBERON:0003059!2.67e-27!83;UBERON:0007282!2.67e-27!83;UBERON:0009618!2.67e-27!83;UBERON:0007285!2.67e-27!83;UBERON:0004290!2.47e-24!70;UBERON:0004573!6.35e-23!33;UBERON:0004571!6.35e-23!33;UBERON:0001134!2.69e-21!61;UBERON:0002036!2.69e-21!61;UBERON:0003082!2.69e-21!61;UBERON:0002385!4.51e-21!63;UBERON:0001015!4.51e-21!63;UBERON:0000383!4.51e-21!63;UBERON:0001981!2.33e-20!60;UBERON:0007500!2.33e-20!60;UBERON:0004537!2.33e-20!60;UBERON:0006965!2.33e-20!60;UBERON:0000486!4.34e-20!82;UBERON:0000055!5.17e-19!69;UBERON:0004872!5.34e-17!84;UBERON:0002049!1.58e-16!79;UBERON:0007798!1.58e-16!79;UBERON:0000947!6.44e-15!21;UBERON:0010191!6.44e-15!21;UBERON:0005256!1.57e-13!143;UBERON:0003914!6.37e-13!118;UBERON:0004535!9.60e-13!110;UBERON:0004237!1.70e-12!10;UBERON:0004695!1.70e-12!10;UBERON:0002111!1.70e-12!10;UBERON:0004178!1.70e-12!10;UBERON:0001009!5.60e-12!113;UBERON:0002204!1.76e-10!167;UBERON:0000025!8.19e-10!194;UBERON:0001135!1.59e-09!15;UBERON:0000490!4.40e-09!138;UBERON:0002199!1.48e-08!45;UBERON:0002416!1.48e-08!45;UBERON:0004111!3.91e-08!241;UBERON:0000119!5.48e-08!312;UBERON:0000483!6.34e-08!309;UBERON:0000475!1.46e-07!365;UBERON:0000477!2.27e-07!286;UBERON:0002097!2.55e-07!40;UBERON:0000467!4.42e-07!625;UBERON:0000480!5.31e-07!626 | ||
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| ||
|short_description=p4@ARHGAP22 | |short_description=p4@ARHGAP22 | ||
}} | }} |
Latest revision as of 09:11, 18 September 2015
Short description: | p4@ARHGAP22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ARHGAP22_5end |
Coexpression cluster: | C2062_Myoblast_mesenchymal_Smooth_leiomyoma_Preadipocyte_Aortic_Fibroblast |
Association with transcript: | -51bp_to_ENST00000491108_5end |
EntrezGene: | ARHGAP22 |
HGNC: | 30320 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.96e-53 | 32 |
smooth muscle cell | 6.71e-41 | 43 |
smooth muscle myoblast | 6.71e-41 | 43 |
muscle precursor cell | 7.88e-39 | 58 |
myoblast | 7.88e-39 | 58 |
multi-potent skeletal muscle stem cell | 7.88e-39 | 58 |
muscle cell | 5.28e-33 | 55 |
electrically responsive cell | 5.82e-29 | 61 |
electrically active cell | 5.82e-29 | 61 |
aortic smooth muscle cell | 1.43e-27 | 10 |
multi fate stem cell | 1.46e-17 | 427 |
somatic stem cell | 4.26e-17 | 433 |
stem cell | 1.71e-16 | 441 |
mesodermal cell | 3.09e-15 | 121 |
skeletal muscle myoblast | 4.83e-12 | 4 |
smooth muscle cell of the umbilical artery | 5.88e-12 | 4 |
smooth muscle cell of the subclavian artery | 2.19e-09 | 5 |
visceral preadipocyte | 2.91e-09 | 3 |
smooth muscle cell of the coronary artery | 3.08e-09 | 3 |
fibroblast | 1.22e-07 | 76 |
fibroblast of dermis | 2.65e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.39e-13 | 14 |
cell type benign neoplasm | 6.86e-10 | 3 |
leiomyoma | 6.86e-10 | 3 |
female reproductive organ cancer | 7.44e-08 | 27 |
benign neoplasm | 1.73e-07 | 4 |
reproductive organ cancer | 3.52e-07 | 29 |