FFCP PHASE1:Hg19::chr21:39493560..39493573,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16707 | |||
|TSSclassifier=strong | |||
|UniProt=Q96T75 | |||
|association_with_transcript=0bp_to_ENST00000357704,ENST00000400477,ENST00000465532,ENST00000469658,ENST00000495344_5end | |||
|cluster_id=chr21:39493560..39493573,+ | |||
|coexpression_cluster_id=C2631 | |||
|description=CAGE_peak_2_at_DSCR8_5end | |||
|id=chr21:39493560..39493573,+ | |||
|ontology_enrichment_celltype=CL:0000039!2.03e-11!7;CL:0000586!2.03e-11!7;CL:0002541!8.05e-11!3;CL:0000064!1.35e-09!3;CL:0005012!1.35e-09!3;CL:0000067!1.35e-09!3;CL:0002304!1.35e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;2.50e-17;3!CL:0000039;9.16e-13;7!CL:0000586;9.16e-13;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.24e-17,3;CL:0000039,1.07e-12,7;CL:0000586,1.07e-12,7 | |||
|ontology_enrichment_development_v019=UBERON:0003124;8.51e-07;1 | |||
|ontology_enrichment_disease=DOID:162!8.28e-08!235;DOID:14566!1.76e-07!239;DOID:0050687!6.74e-07!143;DOID:1036!7.12e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:1036;2.59e-11;8!DOID:3095;2.43e-08;22!DOID:2994;2.43e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,2.60e-11,8;DOID:162,3.75e-11,235;DOID:0050687,8.05e-11,143;DOID:14566,8.37e-11,239;DOID:3095,2.68e-08,22;DOID:2994,2.68e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000488!4.02e-12!4;UBERON:0000476!8.05e-11!3;UBERON:0000920!8.05e-11!3;UBERON:0001778!1.35e-09!3;UBERON:0001775!1.35e-09!3;UBERON:0002203!4.22e-08!6;UBERON:0001768!4.22e-08!6;UBERON:0003124!7.91e-08!7;UBERON:0001905!1.83e-07!2;UBERON:0002757!1.83e-07!2;UBERON:0010134!1.83e-07!2;UBERON:0002784!1.83e-07!2;UBERON:0005408!1.83e-07!2;UBERON:0001899!1.83e-07!2;UBERON:0000473!9.94e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.50e-17;3!UBERON:0000920;2.50e-17;3!UBERON:0001905;1.40e-11;2!UBERON:0002757;1.40e-11;2!UBERON:0010134;1.40e-11;2!UBERON:0005408;1.40e-11;2!UBERON:0001899;1.40e-11;2!UBERON:0000473;6.67e-07;8!UBERON:0001282;8.51e-07;1!UBERON:0009842;8.51e-07;1!UBERON:0003704;8.51e-07;1!UBERON:0001171;8.51e-07;1!UBERON:0001172;8.51e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.24e-17,3;UBERON:0003124,7.62e-13,7;UBERON:0001905,1.19e-11,2;UBERON:0002757,1.19e-11,2;UBERON:0010134,1.19e-11,2;UBERON:0005408,1.19e-11,2;UBERON:0001899,1.19e-11,2;UBERON:0000473,7.16e-07,8;UBERON:0001282,7.82e-07,1;UBERON:0009842,7.82e-07,1;UBERON:0003704,7.82e-07,1;UBERON:0001171,7.82e-07,1;UBERON:0001172,7.82e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567208902984407,0.665188192387692,0.43917392846563,4.58426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20536194382929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0,5.21850243522908,8.69258397364331,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.84783395673362,0,0,0.291604613383254,1.73624994933292,0,0,0,0,0,0.219385397153973,0,0,0,3.30431961956303,2.07507513949254,6.28303510868405,4.34589487688032,4.46601623624687,2.28993983504656,6.39641731222362,0,0,0,4.28631755172643,3.33306308340157,3.18861015254101,4.17458211993207,0,0,2.77495773870551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569219092059585,6.1016856125781,0,0,0,0,0,0,0,0,0,0,0,0,1.9871461170299,0,0,9.21826432892638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60617810496289,0,0,0.129282956361551,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,1.57054096250234,0,0,0,0,0,0.0620964029413835,0,0,0.606596470166591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.22728109925632,0,2.61906694481422,0,0,0,0,0,0,0,0,0,0,0,1.07140367175657,3.69912094440706,0,0,3.01588058552972,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,3.12944890144643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09192236021678,0,0.769583617218004,0,0,0,0,0,0,0,0,0,0,0,0,0.699588091474503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52971800749174,3.16746252528592,0.407955318967927,0,0,2.005660314339,8.2598781057881,10.7185652062471,0,0,0,0.23806443146374,0,0.0620747142958579,0,0,0,0,1.02669990325584,0,0,0,0,3.30854772220918,0,0,0,0,0,0,0,0 | |||
|short_description=p2@DSCR8 | |||
}} |
Latest revision as of 09:23, 18 September 2015
Short description: | p2@DSCR8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DSCR8_5end |
Coexpression cluster: | C2631_chronic_pineal_gall_teratocarcinoma_testicular_choriocarcinoma_cholangiocellular |
Association with transcript: | 0bp_to_ENST00000357704, ENST00000400477, ENST00000465532, ENST00000469658, ENST00000495344_5end |
EntrezGene: | NA |
HGNC: | 16707 |
UniProt: | Q96T75 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.24e-17 | 3 |
germ line cell | 1.07e-12 | 7 |
germ cell | 1.07e-12 | 7 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.24e-17 | 3 |
chorion | 7.62e-13 | 7 |
pineal body | 1.19e-11 | 2 |
regional part of epithalamus | 1.19e-11 | 2 |
secretory circumventricular organ | 1.19e-11 | 2 |
circumventricular organ | 1.19e-11 | 2 |
epithalamus | 1.19e-11 | 2 |
testis | 7.16e-07 | 8 |
intralobular bile duct | 7.82e-07 | 1 |
acinus | 7.82e-07 | 1 |
intrahepatic bile duct | 7.82e-07 | 1 |
portal lobule | 7.82e-07 | 1 |
hepatic acinus | 7.82e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 2.60e-11 | 8 |
cancer | 3.75e-11 | 235 |
cell type cancer | 8.05e-11 | 143 |
disease of cellular proliferation | 8.37e-11 | 239 |
germ cell and embryonal cancer | 2.68e-08 | 22 |
germ cell cancer | 2.68e-08 | 22 |