FFCP PHASE1:Hg19::chr21:39628780..39628801,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3772 | |EntrezGene=3772 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6261 | |HGNC=6261 | ||
|TSSclassifier=strong | |||
|UniProt=C9J0W5 | |UniProt=C9J0W5 | ||
|association_with_transcript=0bp_to_ENST00000417042_5end | |association_with_transcript=0bp_to_ENST00000417042_5end | ||
|cluster_id=chr21:39628780..39628801,+ | |||
|coexpression_cluster_id=C1487 | |coexpression_cluster_id=C1487 | ||
|description=CAGE_peak_16_at_KCNJ15_5end | |description=CAGE_peak_16_at_KCNJ15_5end | ||
|id=chr21:39628780..39628801,+ | |id=chr21:39628780..39628801,+ | ||
|ontology_enrichment_celltype=CL:1000507!6.63e-15!12;CL:1000494!6.63e-15!12;CL:1000449!1.18e-10!16;CL:1000497!3.02e-09!18;CL:0002518!3.02e-09!18 | |ontology_enrichment_celltype=CL:1000507!6.63e-15!12;CL:1000494!6.63e-15!12;CL:1000449!1.18e-10!16;CL:1000497!3.02e-09!18;CL:0002518!3.02e-09!18 | ||
|ontology_enrichment_celltype_v019=CL:1000507;3.03e-16;10!CL:1000494;3.03e-16;10!CL:1001319;1.30e-11;1!CL:1000600;1.30e-11;1!CL:1000449;6.57e-11;15!CL:1000497;1.20e-09;17!CL:0002518;1.20e-09;17 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,2.69e-16,10;CL:1000494,2.69e-16,10;CL:1001319,1.31e-11,1;CL:1000600,1.31e-11,1;CL:1000449,6.09e-11,15;CL:1000497,1.12e-09,17;CL:0002518,1.12e-09,17;CL:0000062,1.19e-08,11;CL:0000375,1.19e-08,11;CL:0000335,1.19e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000335;1.17e-08;11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060085;3.11e-11;1!DOID:3165;3.11e-11;1!DOID:0060121;3.11e-11;1!DOID:2438;3.11e-11;1!DOID:4418;3.11e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,2.68e-11,1;DOID:3165,2.68e-11,1;DOID:0060121,2.68e-11,1;DOID:2438,2.68e-11,1;DOID:4418,2.68e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0003887!1.85e-15!21;UBERON:0006554!1.86e-15!44;UBERON:0001008!5.46e-15!45;UBERON:0009773!6.63e-15!12;UBERON:0001231!6.63e-15!12;UBERON:0004810!6.63e-15!12;UBERON:0000489!7.66e-15!32;UBERON:0000080!9.95e-14!18;UBERON:0002120!9.95e-14!18;UBERON:0004875!9.95e-14!18;UBERON:0005721!9.95e-14!18;UBERON:0005754!9.95e-14!18;UBERON:0007297!9.95e-14!18;UBERON:0000058!3.15e-12!26;UBERON:0004876!4.45e-12!20;UBERON:0006555!4.84e-12!17;UBERON:0005103!4.84e-12!17;UBERON:0000083!4.84e-12!17;UBERON:0009201!4.84e-12!17;UBERON:0004819!4.84e-12!17;UBERON:0006553!4.84e-12!17;UBERON:0003074!4.84e-12!17;UBERON:0003060!4.84e-12!17;UBERON:0002113!5.31e-12!27;UBERON:0003918!5.31e-12!27;UBERON:0005095!5.31e-12!27;UBERON:0007687!5.31e-12!27;UBERON:0003064!1.50e-11!37;UBERON:0004211!1.18e-10!16;UBERON:0001285!1.18e-10!16;UBERON:0007684!1.18e-10!16;UBERON:0003220!1.18e-10!16;UBERON:0004208!1.18e-10!16;UBERON:0005177!2.14e-10!107;UBERON:0000464!8.92e-10!104;UBERON:0000466!3.69e-08!126;UBERON:0003103!6.16e-08!69;UBERON:0003886!1.20e-07!63;UBERON:0006947!1.20e-07!3;UBERON:0004054!1.20e-07!3;UBERON:0005172!1.29e-07!55;UBERON:0005173!1.29e-07!55;UBERON:0002553!2.48e-07!70 | |ontology_enrichment_uberon=UBERON:0003887!1.85e-15!21;UBERON:0006554!1.86e-15!44;UBERON:0001008!5.46e-15!45;UBERON:0009773!6.63e-15!12;UBERON:0001231!6.63e-15!12;UBERON:0004810!6.63e-15!12;UBERON:0000489!7.66e-15!32;UBERON:0000080!9.95e-14!18;UBERON:0002120!9.95e-14!18;UBERON:0004875!9.95e-14!18;UBERON:0005721!9.95e-14!18;UBERON:0005754!9.95e-14!18;UBERON:0007297!9.95e-14!18;UBERON:0000058!3.15e-12!26;UBERON:0004876!4.45e-12!20;UBERON:0006555!4.84e-12!17;UBERON:0005103!4.84e-12!17;UBERON:0000083!4.84e-12!17;UBERON:0009201!4.84e-12!17;UBERON:0004819!4.84e-12!17;UBERON:0006553!4.84e-12!17;UBERON:0003074!4.84e-12!17;UBERON:0003060!4.84e-12!17;UBERON:0002113!5.31e-12!27;UBERON:0003918!5.31e-12!27;UBERON:0005095!5.31e-12!27;UBERON:0007687!5.31e-12!27;UBERON:0003064!1.50e-11!37;UBERON:0004211!1.18e-10!16;UBERON:0001285!1.18e-10!16;UBERON:0007684!1.18e-10!16;UBERON:0003220!1.18e-10!16;UBERON:0004208!1.18e-10!16;UBERON:0005177!2.14e-10!107;UBERON:0000464!8.92e-10!104;UBERON:0000466!3.69e-08!126;UBERON:0003103!6.16e-08!69;UBERON:0003886!1.20e-07!63;UBERON:0006947!1.20e-07!3;UBERON:0004054!1.20e-07!3;UBERON:0005172!1.29e-07!55;UBERON:0005173!1.29e-07!55;UBERON:0002553!2.48e-07!70 | ||
|ontology_enrichment_uberon_v019=UBERON:0006554;2.02e-20;30!UBERON:0001008;2.02e-20;30!UBERON:0000489;2.67e-16;29!UBERON:0004211;3.03e-16;10!UBERON:0009773;3.03e-16;10!UBERON:0001231;3.03e-16;10!UBERON:0004810;3.03e-16;10!UBERON:0002113;1.20e-14;24!UBERON:0011143;1.20e-14;24!UBERON:0002171;9.07e-12;1!UBERON:0006518;9.07e-12;1!UBERON:0008949;9.07e-12;1!UBERON:0000101;9.07e-12;1!UBERON:0002167;9.07e-12;1!UBERON:0001000;1.30e-11;1!UBERON:0004645;1.30e-11;1!UBERON:0005352;1.30e-11;1!UBERON:0001256;1.30e-11;1!UBERON:0001259;1.30e-11;1!UBERON:0006555;6.57e-11;15!UBERON:0004819;6.57e-11;15!UBERON:0001285;6.57e-11;15!UBERON:0007684;6.57e-11;15!UBERON:0000365;5.38e-09;5!UBERON:0005910;1.23e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,2.69e-16,10;UBERON:0000489,2.81e-15,31;UBERON:0002113,1.46e-13,26;UBERON:0003918,1.46e-13,26;UBERON:0011143,1.46e-13,26;UBERON:0005095,1.46e-13,26;UBERON:0007687,1.46e-13,26;UBERON:0006554,9.88e-13,47;UBERON:0001008,1.90e-12,48;UBERON:0002171,9.57e-12,1;UBERON:0006518,9.57e-12,1;UBERON:0008949,9.57e-12,1;UBERON:0000101,9.57e-12,1;UBERON:0002167,9.57e-12,1;UBERON:0001000,1.18e-11,1;UBERON:0005352,1.18e-11,1;UBERON:0004645,1.31e-11,1;UBERON:0001256,1.31e-11,1;UBERON:0001259,1.31e-11,1;UBERON:0004211,6.09e-11,15;UBERON:0009773,6.09e-11,15;UBERON:0001231,6.09e-11,15;UBERON:0001285,6.09e-11,15;UBERON:0007684,6.09e-11,15;UBERON:0004208,6.09e-11,15;UBERON:0006555,2.86e-10,16;UBERON:0004819,2.86e-10,16;UBERON:0000365,6.19e-09,5;UBERON:0005910,1.38e-07,6;UBERON:0005177,6.50e-07,101 | |||
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| ||
|short_description=p16@KCNJ15 | |short_description=p16@KCNJ15 | ||
}} | }} |
Latest revision as of 09:42, 18 September 2015
Short description: | p16@KCNJ15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_KCNJ15_5end |
Coexpression cluster: | C1487_Renal_lung_kidney_ductus_seminal_Skeletal_Urothelial |
Association with transcript: | 0bp_to_ENST00000417042_5end |
EntrezGene: | KCNJ15 |
HGNC: | 6261 |
UniProt: | C9J0W5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.69e-16 | 10 |
nephron tubule epithelial cell | 2.69e-16 | 10 |
bladder cell | 1.31e-11 | 1 |
lower urinary tract cell | 1.31e-11 | 1 |
epithelial cell of nephron | 6.09e-11 | 15 |
kidney cell | 1.12e-09 | 17 |
kidney epithelial cell | 1.12e-09 | 17 |
osteoblast | 1.19e-08 | 11 |
osteoprogenitor cell | 1.19e-08 | 11 |
mesenchyme condensation cell | 1.19e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 2.69e-16 | 10 |
cavitated compound organ | 2.81e-15 | 31 |
kidney | 1.46e-13 | 26 |
kidney mesenchyme | 1.46e-13 | 26 |
upper urinary tract | 1.46e-13 | 26 |
kidney rudiment | 1.46e-13 | 26 |
kidney field | 1.46e-13 | 26 |
urinary system structure | 9.88e-13 | 47 |
renal system | 1.90e-12 | 48 |
lower lobe of right lung | 9.57e-12 | 1 |
right lung lobe | 9.57e-12 | 1 |
lower lobe of lung | 9.57e-12 | 1 |
lobe of lung | 9.57e-12 | 1 |
right lung | 9.57e-12 | 1 |
vas deferens | 1.18e-11 | 1 |
spermatic cord | 1.18e-11 | 1 |
urinary bladder urothelium | 1.31e-11 | 1 |
wall of urinary bladder | 1.31e-11 | 1 |
mucosa of urinary bladder | 1.31e-11 | 1 |
nephron epithelium | 6.09e-11 | 15 |
renal tubule | 6.09e-11 | 15 |
nephron tubule | 6.09e-11 | 15 |
nephron | 6.09e-11 | 15 |
uriniferous tubule | 6.09e-11 | 15 |
nephrogenic mesenchyme | 6.09e-11 | 15 |
excretory tube | 2.86e-10 | 16 |
kidney epithelium | 2.86e-10 | 16 |
urothelium | 6.19e-09 | 5 |
transitional epithelium | 1.38e-07 | 6 |
trunk region element | 6.50e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 2.68e-11 | 1 |
skin benign neoplasm | 2.68e-11 | 1 |
integumentary system benign neoplasm | 2.68e-11 | 1 |
dermis tumor | 2.68e-11 | 1 |
cutaneous fibrous histiocytoma | 2.68e-11 | 1 |