FFCP PHASE1:Hg19::chr9:97766409..97766428,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84909 | |EntrezGene=84909 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1361 | |HGNC=1361 | ||
|TSSclassifier=strong | |||
|UniProt=B4DQU3 | |UniProt=B4DQU3 | ||
|association_with_transcript=0bp_to_ENST00000425634_5end | |association_with_transcript=0bp_to_ENST00000425634_5end | ||
|cluster_id=chr9:97766409..97766428,+ | |||
|coexpression_cluster_id=C86 | |coexpression_cluster_id=C86 | ||
|description=CAGE_peak_20_at_C9orf3_5end | |description=CAGE_peak_20_at_C9orf3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002559;4.87e-15;5!CL:0000346;9.30e-12;3!CL:1000428;9.30e-12;3 | |ontology_enrichment_celltype_v019=CL:0002559;4.87e-15;5!CL:0000346;9.30e-12;3!CL:1000428;9.30e-12;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002559,3.01e-15,5;CL:0000346,6.04e-12,3;CL:1000428,6.04e-12,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:299!8.94e-07!25 | |ontology_enrichment_disease=DOID:299!8.94e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:3151;3.00e-09;1!DOID:3149;3.00e-09;1 | |ontology_enrichment_disease_v019=DOID:3151;3.00e-09;1!DOID:3149;3.00e-09;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3151,5.28e-09,1;DOID:3149,5.28e-09,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002073;4.87e-15;5!UBERON:0000412;9.30e-12;3!UBERON:0001992;9.30e-12;3!UBERON:0005795;1.21e-09;1!UBERON:0006834;3.00e-09;1 | |ontology_enrichment_uberon_v019=UBERON:0002073;4.87e-15;5!UBERON:0000412;9.30e-12;3!UBERON:0001992;9.30e-12;3!UBERON:0005795;1.21e-09;1!UBERON:0006834;3.00e-09;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002073,3.01e-15,5;UBERON:0005086,3.01e-15,5;UBERON:0000412,6.04e-12,3;UBERON:0001992,6.04e-12,3;UBERON:0006834,1.84e-09,1 | |||
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|phase1_expression=0,0.642301571672949,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0.123121058076788,0.204000691244253,1.25381888591235,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0.361439152384566,0,1.30361867064741,0.795285947051099,2.43317435151318,0.0945348171640679,0.221729397462564,0.43917392846563,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506522046658319,0.529636723252875,0.286836620748814,0,0.560677600142307,1.06748995729705,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0,0.717558542755448,0.427114777637135,0,0,0.103052529238439,0,0,0.843881661206331,0.292311015483596,0.504867548488229,0.368199594569197,0.161646056818812,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,1.92972281457866,2.76269842704961,0,1.44375896333917,0,0.337169380156203,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0.982827216677626,0,0,0.122988438543114,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0.434343920002738,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,1.07057393278297,0,0.35142424497814,0.300946099727719,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0,0.744323423456331,1.68808170616869,0,0,0.511707249066704,0,0,0,0.177561725313127,0,0,0,0.120859449591622,0.200506470303285,0.0920809889358963,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0.656029291399411,0,0.515205058238611,0.0915694648183434,0.247528499761764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0.429374660225974,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0.202910376962704,0,0,0,0,0.35667105148125,0,0.211107635297664,0,0,0,0,0,0,0.564862804660675,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0.211125408127993,0.796991953004279,0.276283915531148,0,0.102268682502155,0,0.311039587661807,0.179736702294654,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0.520855522170466,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0.41827123283581,0.615602068030377,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,12.9833183845255,0,0.0884575645033392,0,0,0.123563938946503,0,0,0,0,0,0,0,0.789168805698781,0,0,0.442306057399416,0,0,0,0,0.313932918407225,0,0.569219092059585,0,0,0,0.0870592065804026,0.698906672968121,0.343972064943233,0,0,0.0821154570532092,0.0969890164884194,0.0882561266915003,0,0,0,0.0633107959558787,2.93327074102205,0.0801588202515337,0.640358984218058,0.39961921916426,0.432271251462318,0.114536596165916,0,0,0,0,0,0,0.407992870545287,0,0,0,0,0.429765441419957,0,0.279282401272254,0.916641696046735,0,0,0,0,0,0,1.16495949527454,0,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,1.0063040627978,0.236417121897595,0.577000469484979,0,0,0,0,0,0,0.542999601753713,0,0.653174720218818,0,0,0.511164065356265,0.113312091520126,0.146552233678082,0,0,0,0,0,0.320362237703084,0.471612915298998,0,0,0,0,0,0,0.2506898940227,0,0,0.628216385000937,0,0,0,0,0,0,0.138348634936231,0.124980407962107,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0.192619830407303,0.428883182749851,0,0.453411851024545,0,0,0,3.39681591877069,0.219284049578707,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0.983091635014877,0,0,0,0,0,0,0,0,0,0.431299245586727,0,0.218419276384028,0,0,0.123935764259002,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0.235939446695481,0.183428598521679,0,0,0,0,0.150420656698515,0,0,0,0.327543835020193,0.295712172434091,0,0,0,0,0.546974809018219,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0.79832133146375,0,0.171488009437418,0,0,0,0,1.25588948560822,0,0,0,0,0,0.0714765441766563,0,1.16241425368125,0,0.801711364730253,0,0.17071847709395,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0,0.490751168076215,0.121917924982269,0,0,0,0.485710993059139,0,0,0,8.35801007088304,0,0.150962843566674,0,0,0,1.96118657403124,0,0,0,0,0,0.375935671919414,0.257831551894309,0,0,0,0,0.730336388246517,0.458729283404541,0,0.157771562193185,0,0,1.0580536810308,0,0.924351257262837,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0.23806443146374,0,0,0,0,0.808468755832877,0,0,0.0673520530145875,0.0717222053926763,1.66330178273007,0.0814032686109745,0,0,0.0898252021065869,0,1.71138021856013,2.44137706989443,0.665756774185513,0,0 | ||
|short_description=p20@C9orf3 | |short_description=p20@C9orf3 | ||
}} | }} |
Latest revision as of 10:18, 18 September 2015
Short description: | p20@C9orf3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_C9orf3_5end |
Coexpression cluster: | C86_colon_carcinoid_small_neuroectodermal_giant_large_neuroepithelioma |
Association with transcript: | 0bp_to_ENST00000425634_5end |
EntrezGene: | C9orf3 |
HGNC: | 1361 |
UniProt: | B4DQU3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle cell | 3.01e-15 | 5 |
hair follicle dermal papilla cell | 6.04e-12 | 3 |
stem cell of epidermis | 6.04e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
hair follicle | 3.01e-15 | 5 |
hair follicle placode | 3.01e-15 | 5 |
dermal papilla | 6.04e-12 | 3 |
papillary layer of dermis | 6.04e-12 | 3 |
uterus or analog | 1.84e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 5.28e-09 | 1 |
keratoacanthoma | 5.28e-09 | 1 |