FFCP PHASE1:Hg19::chr9:98279050..98279078,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5727 | |EntrezGene=5727 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9585 | |HGNC=9585 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-110bp_to_ENST00000551425,ENST00000551623_5end | |association_with_transcript=-110bp_to_ENST00000551425,ENST00000551623_5end | ||
|cluster_id=chr9:98279050..98279078,- | |||
|coexpression_cluster_id=C4835 | |||
|description=CAGE_peak_4_at_PTCH1_5end | |description=CAGE_peak_4_at_PTCH1_5end | ||
|id=chr9:98279050..98279078,- | |id=chr9:98279050..98279078,- | ||
|ontology_enrichment_celltype=CL:0002322!4.88e-07!5 | |ontology_enrichment_celltype=CL:0002322!4.88e-07!5 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!3.02e-08!22;DOID:2994!3.02e-08!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.74e-28!115;UBERON:0001049!8.18e-25!57;UBERON:0005068!8.18e-25!57;UBERON:0006241!8.18e-25!57;UBERON:0007135!8.18e-25!57;UBERON:0001017!3.04e-21!82;UBERON:0005743!7.89e-21!86;UBERON:0000073!1.37e-20!94;UBERON:0001016!1.37e-20!94;UBERON:0002616!4.78e-19!59;UBERON:0002780!7.98e-17!41;UBERON:0001890!7.98e-17!41;UBERON:0006240!7.98e-17!41;UBERON:0002346!1.44e-16!90;UBERON:0000955!2.56e-16!69;UBERON:0006238!2.56e-16!69;UBERON:0003080!3.19e-16!42;UBERON:0002020!1.01e-15!34;UBERON:0003528!1.01e-15!34;UBERON:0001893!1.35e-15!34;UBERON:0003075!6.09e-15!86;UBERON:0007284!6.09e-15!86;UBERON:0002791!7.93e-15!33;UBERON:0001869!3.60e-14!32;UBERON:0002619!1.56e-13!22;UBERON:0001950!2.35e-13!20;UBERON:0000956!2.38e-11!25;UBERON:0000203!2.38e-11!25;UBERON:0003076!4.39e-10!15;UBERON:0003057!4.39e-10!15;UBERON:0000924!5.00e-10!173;UBERON:0006601!5.00e-10!173;UBERON:0003056!1.27e-09!61;UBERON:0003135!4.89e-09!11;UBERON:0004121!6.37e-09!169;UBERON:0000473!5.41e-08!8;UBERON:0001871!1.04e-07!7;UBERON:0000033!1.08e-07!123;UBERON:0000153!2.49e-07!129;UBERON:0007811!2.49e-07!129;UBERON:0004733!4.91e-07!12;UBERON:0002028!4.91e-07!12;UBERON:0007277!4.91e-07!12;UBERON:0005409!5.03e-07!35;UBERON:0002298!7.48e-07!8 | |ontology_enrichment_uberon=UBERON:0007023!1.74e-28!115;UBERON:0001049!8.18e-25!57;UBERON:0005068!8.18e-25!57;UBERON:0006241!8.18e-25!57;UBERON:0007135!8.18e-25!57;UBERON:0001017!3.04e-21!82;UBERON:0005743!7.89e-21!86;UBERON:0000073!1.37e-20!94;UBERON:0001016!1.37e-20!94;UBERON:0002616!4.78e-19!59;UBERON:0002780!7.98e-17!41;UBERON:0001890!7.98e-17!41;UBERON:0006240!7.98e-17!41;UBERON:0002346!1.44e-16!90;UBERON:0000955!2.56e-16!69;UBERON:0006238!2.56e-16!69;UBERON:0003080!3.19e-16!42;UBERON:0002020!1.01e-15!34;UBERON:0003528!1.01e-15!34;UBERON:0001893!1.35e-15!34;UBERON:0003075!6.09e-15!86;UBERON:0007284!6.09e-15!86;UBERON:0002791!7.93e-15!33;UBERON:0001869!3.60e-14!32;UBERON:0002619!1.56e-13!22;UBERON:0001950!2.35e-13!20;UBERON:0000956!2.38e-11!25;UBERON:0000203!2.38e-11!25;UBERON:0003076!4.39e-10!15;UBERON:0003057!4.39e-10!15;UBERON:0000924!5.00e-10!173;UBERON:0006601!5.00e-10!173;UBERON:0003056!1.27e-09!61;UBERON:0003135!4.89e-09!11;UBERON:0004121!6.37e-09!169;UBERON:0000473!5.41e-08!8;UBERON:0001871!1.04e-07!7;UBERON:0000033!1.08e-07!123;UBERON:0000153!2.49e-07!129;UBERON:0007811!2.49e-07!129;UBERON:0004733!4.91e-07!12;UBERON:0002028!4.91e-07!12;UBERON:0007277!4.91e-07!12;UBERON:0005409!5.03e-07!35;UBERON:0002298!7.48e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.03e-20;17!UBERON:0005409;3.16e-19;22!UBERON:0000059;3.37e-17;11!UBERON:0004907;6.17e-13;5!UBERON:0000922;3.10e-12;49!UBERON:0004921;4.30e-11;33!UBERON:0001155;4.39e-11;9!UBERON:0001052;1.34e-09;4!UBERON:0003135;1.92e-08;11!UBERON:0002108;5.30e-08;4!UBERON:0000473;7.21e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.29e-20,17;UBERON:0000059,4.20e-17,11;UBERON:0005409,1.18e-16,25;UBERON:0004907,8.02e-13,5;UBERON:0001155,5.26e-11,9;UBERON:0001052,1.55e-09,4;UBERON:0003135,1.77e-08,11;UBERON:0002108,5.50e-08,4;UBERON:0000473,6.23e-08,8 | |||
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| ||
|short_description=p4@PTCH1 | |short_description=p4@PTCH1 | ||
}} | }} |
Latest revision as of 10:58, 18 September 2015
Short description: | p4@PTCH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PTCH1_5end |
Coexpression cluster: | C4835_rhabdomyosarcoma_rectum_colon_stomach_duodenum_small_testis |
Association with transcript: | -110bp_to_ENST00000551425, ENST00000551623_5end |
EntrezGene: | PTCH1 |
HGNC: | 9585 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.29e-20 | 17 |
large intestine | 4.20e-17 | 11 |
gastrointestinal system | 1.18e-16 | 25 |
lower digestive tract | 8.02e-13 | 5 |
colon | 5.26e-11 | 9 |
rectum | 1.55e-09 | 4 |
male reproductive organ | 1.77e-08 | 11 |
small intestine | 5.50e-08 | 4 |
testis | 6.23e-08 | 8 |