FFCP PHASE1:Hg19::chr9:98279050..98279078,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5727 | |EntrezGene=5727 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9585 | |HGNC=9585 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-110bp_to_ENST00000551425,ENST00000551623_5end | |association_with_transcript=-110bp_to_ENST00000551425,ENST00000551623_5end | ||
|cluster_id=chr9:98279050..98279078,- | |||
|coexpression_cluster_id=C4835 | |||
|description=CAGE_peak_4_at_PTCH1_5end | |description=CAGE_peak_4_at_PTCH1_5end | ||
|id=chr9:98279050..98279078,- | |id=chr9:98279050..98279078,- | ||
|ontology_enrichment_celltype=CL:0002322!4.88e-07!5 | |ontology_enrichment_celltype=CL:0002322!4.88e-07!5 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!3.02e-08!22;DOID:2994!3.02e-08!22 | |ontology_enrichment_disease=DOID:3095!3.02e-08!22;DOID:2994!3.02e-08!22 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.74e-28!115;UBERON:0001049!8.18e-25!57;UBERON:0005068!8.18e-25!57;UBERON:0006241!8.18e-25!57;UBERON:0007135!8.18e-25!57;UBERON:0001017!3.04e-21!82;UBERON:0005743!7.89e-21!86;UBERON:0000073!1.37e-20!94;UBERON:0001016!1.37e-20!94;UBERON:0002616!4.78e-19!59;UBERON:0002780!7.98e-17!41;UBERON:0001890!7.98e-17!41;UBERON:0006240!7.98e-17!41;UBERON:0002346!1.44e-16!90;UBERON:0000955!2.56e-16!69;UBERON:0006238!2.56e-16!69;UBERON:0003080!3.19e-16!42;UBERON:0002020!1.01e-15!34;UBERON:0003528!1.01e-15!34;UBERON:0001893!1.35e-15!34;UBERON:0003075!6.09e-15!86;UBERON:0007284!6.09e-15!86;UBERON:0002791!7.93e-15!33;UBERON:0001869!3.60e-14!32;UBERON:0002619!1.56e-13!22;UBERON:0001950!2.35e-13!20;UBERON:0000956!2.38e-11!25;UBERON:0000203!2.38e-11!25;UBERON:0003076!4.39e-10!15;UBERON:0003057!4.39e-10!15;UBERON:0000924!5.00e-10!173;UBERON:0006601!5.00e-10!173;UBERON:0003056!1.27e-09!61;UBERON:0003135!4.89e-09!11;UBERON:0004121!6.37e-09!169;UBERON:0000473!5.41e-08!8;UBERON:0001871!1.04e-07!7;UBERON:0000033!1.08e-07!123;UBERON:0000153!2.49e-07!129;UBERON:0007811!2.49e-07!129;UBERON:0004733!4.91e-07!12;UBERON:0002028!4.91e-07!12;UBERON:0007277!4.91e-07!12;UBERON:0005409!5.03e-07!35;UBERON:0002298!7.48e-07!8 | |ontology_enrichment_uberon=UBERON:0007023!1.74e-28!115;UBERON:0001049!8.18e-25!57;UBERON:0005068!8.18e-25!57;UBERON:0006241!8.18e-25!57;UBERON:0007135!8.18e-25!57;UBERON:0001017!3.04e-21!82;UBERON:0005743!7.89e-21!86;UBERON:0000073!1.37e-20!94;UBERON:0001016!1.37e-20!94;UBERON:0002616!4.78e-19!59;UBERON:0002780!7.98e-17!41;UBERON:0001890!7.98e-17!41;UBERON:0006240!7.98e-17!41;UBERON:0002346!1.44e-16!90;UBERON:0000955!2.56e-16!69;UBERON:0006238!2.56e-16!69;UBERON:0003080!3.19e-16!42;UBERON:0002020!1.01e-15!34;UBERON:0003528!1.01e-15!34;UBERON:0001893!1.35e-15!34;UBERON:0003075!6.09e-15!86;UBERON:0007284!6.09e-15!86;UBERON:0002791!7.93e-15!33;UBERON:0001869!3.60e-14!32;UBERON:0002619!1.56e-13!22;UBERON:0001950!2.35e-13!20;UBERON:0000956!2.38e-11!25;UBERON:0000203!2.38e-11!25;UBERON:0003076!4.39e-10!15;UBERON:0003057!4.39e-10!15;UBERON:0000924!5.00e-10!173;UBERON:0006601!5.00e-10!173;UBERON:0003056!1.27e-09!61;UBERON:0003135!4.89e-09!11;UBERON:0004121!6.37e-09!169;UBERON:0000473!5.41e-08!8;UBERON:0001871!1.04e-07!7;UBERON:0000033!1.08e-07!123;UBERON:0000153!2.49e-07!129;UBERON:0007811!2.49e-07!129;UBERON:0004733!4.91e-07!12;UBERON:0002028!4.91e-07!12;UBERON:0007277!4.91e-07!12;UBERON:0005409!5.03e-07!35;UBERON:0002298!7.48e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.03e-20;17!UBERON:0005409;3.16e-19;22!UBERON:0000059;3.37e-17;11!UBERON:0004907;6.17e-13;5!UBERON:0000922;3.10e-12;49!UBERON:0004921;4.30e-11;33!UBERON:0001155;4.39e-11;9!UBERON:0001052;1.34e-09;4!UBERON:0003135;1.92e-08;11!UBERON:0002108;5.30e-08;4!UBERON:0000473;7.21e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.29e-20,17;UBERON:0000059,4.20e-17,11;UBERON:0005409,1.18e-16,25;UBERON:0004907,8.02e-13,5;UBERON:0001155,5.26e-11,9;UBERON:0001052,1.55e-09,4;UBERON:0003135,1.77e-08,11;UBERON:0002108,5.50e-08,4;UBERON:0000473,6.23e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,3.01251873644739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0.853815942907168,0.927708378250397,1.16193942869518,0.725627385107593,0.756962552626885,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0,1.01637849688985,0,0,0,0.637938751653163,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,5.58573735391895,5.69315549452057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,1.18785872333055,0,0.994147647766298,0.703347082052564,0.111308705022906,0,0.844501632511974,0,2.21027132424918,1.76352923497993,0,0,0,0,0,0,0.789147245095469,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.60298219312704,3.05163472634166,0.552896299656123,0.295547618953547,0,0,0.139423744278603,2.84715956464049,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,2.16388639742091,9.95261931078505,5.04208117669033,17.1088440581415,0.296521128680622,0.494255755786011,0.208843899010911,0.067401132980677,1.60515529459758,0.234264445725339,0,0.19566461893209,0,0.789168805698781,10.8891644443797,0,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0.313932918407225,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0.193978032976839,1.5003541537555,0.225980740780532,0,0,0.126621591911757,0,0,6.40358984218058,0,0,0.458146384663663,2.23073497220554,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0.788662062837943,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,1.0896272488926,0.321506296930038,0.275078873194468,0.415440338029185,0,0,0.546746009922222,0,0.157611414598396,0.681909645754975,0,0,0,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,0.517131825446202,0.13223260174269,0,0,0,2.67247318669432,0.414239055347196,0,0,0,0,0,0,0,0,0.157054096250234,0,0.488105059607853,0.625954653532499,1.72022758707021,0.443716206147409,0.683060432355218,0.830091809617385,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,1.54400723580486,0,0,0,0,0,0,0,1.10606748921385,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,4.97661808026378,0.255788742607303,0.323474434190045,0,1.20130602011215,0,0.425149840203366,2.60265104943905,0,0,0.0788617450012534,0,0,0,0.642292250964595,0,0.478901577171454,0.615349092722265,0.252071696221718,0.345786262321089,0.161475645631851,0,0,0,0,0,0,0,3.38157577597667,0.150420656698515,0,0,0,0,0,0.337687923091973,0,0.413373593002368,0.19024743058172,1.64092442705466,0,0,0.175871244359621,0,0.535701835878287,0.336283722218824,0,0,0,0,0,0.271878931907327,0.526182188502793,0,0,0.470958557103084,0.785577949580009,2.5224494698241,41.0921424229273,0,0,1.28657779517981,0,56.2608498781726,0.347716544605159,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0.121917924982269,0,0,0,1.45713297917742,0,0,0,3.9531128713636,0,0.301925687133347,4.39892701215285,9.61662066217412,0,1.22574160876953,0.235676547101626,2.74831853960923,0.297046400327086,5.4945244585842,0,0.187967835959707,0.0644578879735772,0,0,0,0,15.3370641531769,0,0.573358332605805,1.73548718412503,0.339957450954573,0.872701380680755,8.99345628876181,0,0,0,0.252332849670158,2.29457701123761,1.90047751517155,1.73381010561369,0.801652215796681,1.47031839255752,0.250707539292375,3.18270532516606,9.9146728157786,0,0.517164979309476,0,0.23806443146374,0,0,0.112131862580613,0,0,0.435433495793923,1.02669990325584,0.0673520530145875,0.215166616178029,0.99798106963804,0,0,0,0,0,7.70121098352059,2.84827324821017,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,3.01251873644739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0.853815942907168,0.927708378250397,1.16193942869518,0.725627385107593,0.756962552626885,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0,1.01637849688985,0,0,0,0.637938751653163,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,5.58573735391895,5.69315549452057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,1.18785872333055,0,0.994147647766298,0.703347082052564,0.111308705022906,0,0.844501632511974,0,2.21027132424918,1.76352923497993,0,0,0,0,0,0,0.789147245095469,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.60298219312704,3.05163472634166,0.552896299656123,0.295547618953547,0,0,0.139423744278603,2.84715956464049,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,2.16388639742091,9.95261931078505,5.04208117669033,17.1088440581415,0.296521128680622,0.494255755786011,0.208843899010911,0.067401132980677,1.60515529459758,0.234264445725339,0,0.19566461893209,0,0.789168805698781,10.8891644443797,0,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0.313932918407225,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0.193978032976839,1.5003541537555,0.225980740780532,0,0,0.126621591911757,0,0,6.40358984218058,0,0,0.458146384663663,2.23073497220554,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0.788662062837943,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,1.0896272488926,0.321506296930038,0.275078873194468,0.415440338029185,0,0,0.546746009922222,0,0.157611414598396,0.681909645754975,0,0,0,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,0.517131825446202,0.13223260174269,0,0,0,2.67247318669432,0.414239055347196,0,0,0,0,0,0,0,0,0.157054096250234,0,0.488105059607853,0.625954653532499,1.72022758707021,0.443716206147409,0.683060432355218,0.830091809617385,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,1.54400723580486,0,0,0,0,0,0,0,1.10606748921385,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,4.97661808026378,0.255788742607303,0.323474434190045,0,1.20130602011215,0,0.425149840203366,2.60265104943905,0,0,0.0788617450012534,0,0,0,0.642292250964595,0,0.478901577171454,0.615349092722265,0.252071696221718,0.345786262321089,0.161475645631851,0,0,0,0,0,0,0,3.38157577597667,0.150420656698515,0,0,0,0,0,0.337687923091973,0,0.413373593002368,0.19024743058172,1.64092442705466,0,0,0.175871244359621,0,0.535701835878287,0.336283722218824,0,0,0,0,0,0.271878931907327,0.526182188502793,0,0,0.470958557103084,0.785577949580009,2.5224494698241,41.0921424229273,0,0,1.28657779517981,0,56.2608498781726,0.347716544605159,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0.121917924982269,0,0,0,1.45713297917742,0,0,0,3.9531128713636,0,0.301925687133347,4.39892701215285,9.61662066217412,0,1.22574160876953,0.235676547101626,2.74831853960923,0.297046400327086,5.4945244585842,0,0.187967835959707,0.0644578879735772,0,0,0,0,15.3370641531769,0,0.573358332605805,1.73548718412503,0.339957450954573,0.872701380680755,8.99345628876181,0,0,0,0.252332849670158,2.29457701123761,1.90047751517155,1.73381010561369,0.801652215796681,1.47031839255752,0.250707539292375,3.18270532516606,9.9146728157786,0,0.517164979309476,0,0.23806443146374,0,0,0.112131862580613,0,0,0.435433495793923,1.02669990325584,0.0673520530145875,0.215166616178029,0.99798106963804,0,0,0,0,0,7.70121098352059,2.84827324821017,0,0,0 | ||
|short_description=p4@PTCH1 | |short_description=p4@PTCH1 | ||
}} | }} |
Latest revision as of 10:58, 18 September 2015
Short description: | p4@PTCH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PTCH1_5end |
Coexpression cluster: | C4835_rhabdomyosarcoma_rectum_colon_stomach_duodenum_small_testis |
Association with transcript: | -110bp_to_ENST00000551425, ENST00000551623_5end |
EntrezGene: | PTCH1 |
HGNC: | 9585 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.29e-20 | 17 |
large intestine | 4.20e-17 | 11 |
gastrointestinal system | 1.18e-16 | 25 |
lower digestive tract | 8.02e-13 | 5 |
colon | 5.26e-11 | 9 |
rectum | 1.55e-09 | 4 |
male reproductive organ | 1.77e-08 | 11 |
small intestine | 5.50e-08 | 4 |
testis | 6.23e-08 | 8 |