FFCP PHASE1:Hg19::chr9:98279099..98279113,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5727 | |EntrezGene=5727 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9585 | |HGNC=9585 | ||
|TSSclassifier=strong | |||
|UniProt=Q13635,F5H3A7,Q59FG5 | |UniProt=Q13635,F5H3A7,Q59FG5 | ||
|association_with_transcript=133bp_to_ENST00000375274,ENST00000437951,ENST00000544247,NM_001083602,NM_001083603,uc004avm.3,uc004avo.2,uc010mrr.2,uc010mrv.1,uc010mrw.1_5end | |association_with_transcript=133bp_to_ENST00000375274,ENST00000437951,ENST00000544247,NM_001083602,NM_001083603,uc004avm.3,uc004avo.2,uc010mrr.2,uc010mrv.1,uc010mrw.1_5end | ||
|cluster_id=chr9:98279099..98279113,- | |||
|coexpression_cluster_id=C4835 | |coexpression_cluster_id=C4835 | ||
|description=CAGE_peak_11_at_PTCH1_5end | |description=CAGE_peak_11_at_PTCH1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000062;3.22e-12;9 | |ontology_enrichment_celltype_v019=CL:0000062;3.22e-12;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000062,4.72e-10,11;CL:0000375,4.72e-10,11;CL:0000335,4.72e-10,11 | |||
|ontology_enrichment_development_v019=CL:0000335;4.22e-10;11 | |ontology_enrichment_development_v019=CL:0000335;4.22e-10;11 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.49e-15!57;UBERON:0005068!1.49e-15!57;UBERON:0006241!1.49e-15!57;UBERON:0007135!1.49e-15!57;UBERON:0000073!8.20e-14!94;UBERON:0001016!8.20e-14!94;UBERON:0002346!4.29e-13!90;UBERON:0003075!6.09e-13!86;UBERON:0007284!6.09e-13!86;UBERON:0005743!9.60e-13!86;UBERON:0001017!1.34e-12!82;UBERON:0000955!1.45e-12!69;UBERON:0006238!1.45e-12!69;UBERON:0002616!4.50e-12!59;UBERON:0002020!5.98e-12!34;UBERON:0003528!5.98e-12!34;UBERON:0001893!6.66e-12!34;UBERON:0001869!2.33e-11!32;UBERON:0001950!2.53e-11!20;UBERON:0002791!5.85e-11!33;UBERON:0002619!4.39e-10!22;UBERON:0007023!4.56e-10!115;UBERON:0000059!1.75e-09!11;UBERON:0002780!3.36e-09!41;UBERON:0001890!3.36e-09!41;UBERON:0006240!3.36e-09!41;UBERON:0001871!5.51e-09!7;UBERON:0003080!6.89e-09!42;UBERON:0003076!6.92e-09!15;UBERON:0003057!6.92e-09!15;UBERON:0000956!1.36e-08!25;UBERON:0000203!1.36e-08!25;UBERON:0005409!1.93e-08!35;UBERON:0004907!1.25e-07!5;UBERON:0000160!2.55e-07!27;UBERON:0000924!5.17e-07!173;UBERON:0006601!5.17e-07!173;UBERON:0004733!7.68e-07!12;UBERON:0002028!7.68e-07!12;UBERON:0007277!7.68e-07!12;UBERON:0004121!8.65e-07!169 | |ontology_enrichment_uberon=UBERON:0001049!1.49e-15!57;UBERON:0005068!1.49e-15!57;UBERON:0006241!1.49e-15!57;UBERON:0007135!1.49e-15!57;UBERON:0000073!8.20e-14!94;UBERON:0001016!8.20e-14!94;UBERON:0002346!4.29e-13!90;UBERON:0003075!6.09e-13!86;UBERON:0007284!6.09e-13!86;UBERON:0005743!9.60e-13!86;UBERON:0001017!1.34e-12!82;UBERON:0000955!1.45e-12!69;UBERON:0006238!1.45e-12!69;UBERON:0002616!4.50e-12!59;UBERON:0002020!5.98e-12!34;UBERON:0003528!5.98e-12!34;UBERON:0001893!6.66e-12!34;UBERON:0001869!2.33e-11!32;UBERON:0001950!2.53e-11!20;UBERON:0002791!5.85e-11!33;UBERON:0002619!4.39e-10!22;UBERON:0007023!4.56e-10!115;UBERON:0000059!1.75e-09!11;UBERON:0002780!3.36e-09!41;UBERON:0001890!3.36e-09!41;UBERON:0006240!3.36e-09!41;UBERON:0001871!5.51e-09!7;UBERON:0003080!6.89e-09!42;UBERON:0003076!6.92e-09!15;UBERON:0003057!6.92e-09!15;UBERON:0000956!1.36e-08!25;UBERON:0000203!1.36e-08!25;UBERON:0005409!1.93e-08!35;UBERON:0004907!1.25e-07!5;UBERON:0000160!2.55e-07!27;UBERON:0000924!5.17e-07!173;UBERON:0006601!5.17e-07!173;UBERON:0004733!7.68e-07!12;UBERON:0002028!7.68e-07!12;UBERON:0007277!7.68e-07!12;UBERON:0004121!8.65e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;3.77e-18;22!UBERON:0000059;1.81e-17;11!UBERON:0000160;2.58e-16;17!UBERON:0001052;7.92e-13;4!UBERON:0000922;1.35e-11;49!UBERON:0004921;1.65e-11;33!UBERON:0004907;1.90e-10;5 | |ontology_enrichment_uberon_v019=UBERON:0005409;3.77e-18;22!UBERON:0000059;1.81e-17;11!UBERON:0000160;2.58e-16;17!UBERON:0001052;7.92e-13;4!UBERON:0000922;1.35e-11;49!UBERON:0004921;1.65e-11;33!UBERON:0004907;1.90e-10;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000059,1.93e-17,11;UBERON:0000160,2.84e-16,17;UBERON:0005409,5.41e-16,25;UBERON:0001052,1.10e-12,4;UBERON:0004907,2.47e-10,5 | |||
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| ||
|short_description=p11@PTCH1 | |short_description=p11@PTCH1 | ||
}} | }} |
Latest revision as of 10:58, 18 September 2015
Short description: | p11@PTCH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_PTCH1_5end |
Coexpression cluster: | C4835_rhabdomyosarcoma_rectum_colon_stomach_duodenum_small_testis |
Association with transcript: | 133bp_to_ENST00000375274, ENST00000437951, ENST00000544247, NM_001083602, NM_001083603, uc004avm.3, uc004avo.2, uc010mrr.2, uc010mrv.1, uc010mrw.1_5end |
EntrezGene: | PTCH1 |
HGNC: | 9585 |
UniProt: | Q13635F5H3A7Q59FG5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 4.72e-10 | 11 |
osteoprogenitor cell | 4.72e-10 | 11 |
mesenchyme condensation cell | 4.72e-10 | 11 |
Ontology term | p-value | n |
---|---|---|
large intestine | 1.93e-17 | 11 |
intestine | 2.84e-16 | 17 |
gastrointestinal system | 5.41e-16 | 25 |
rectum | 1.10e-12 | 4 |
lower digestive tract | 2.47e-10 | 5 |