FFCP PHASE1:Hg19::chr1:167905338..167905343,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:167905338..167905343,-
|short_description=p6@BRP44
|description=CAGE_peak_6_at_BRP44_5end
|association_with_transcript=36bp_to_uc001ges.2_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25874 | |EntrezGene=25874 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24515 | |HGNC=24515 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=36bp_to_uc001ges.2_5end | |||
|cluster_id=chr1:167905338..167905343,- | |||
|description=CAGE_peak_6_at_BRP44_5end | |||
|id=chr1:167905338..167905343,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.44e-10!57;UBERON:0005068!2.44e-10!57;UBERON:0006241!2.44e-10!57;UBERON:0007135!2.44e-10!57;UBERON:0002619!6.96e-10!22;UBERON:0001017!1.03e-09!82;UBERON:0007023!2.09e-09!115;UBERON:0001950!2.26e-09!20;UBERON:0001869!3.28e-09!32;UBERON:0003080!5.24e-09!42;UBERON:0001893!9.55e-09!34;UBERON:0002020!9.74e-09!34;UBERON:0003528!9.74e-09!34;UBERON:0000955!9.98e-09!69;UBERON:0006238!9.98e-09!69;UBERON:0002780!1.17e-08!41;UBERON:0001890!1.17e-08!41;UBERON:0006240!1.17e-08!41;UBERON:0005743!1.31e-08!86;UBERON:0002791!3.33e-08!33;UBERON:0000956!6.58e-08!25;UBERON:0000203!6.58e-08!25;UBERON:0002616!1.01e-07!59;UBERON:0000073!1.92e-07!94;UBERON:0001016!1.92e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;4.57e-20;20!UBERON:0001869;1.39e-18;32!UBERON:0002619;4.79e-18;22!UBERON:0001893;1.61e-17;34!UBERON:0003528;4.29e-17;34!UBERON:0002020;4.29e-17;34!UBERON:0002791;4.51e-17;32!UBERON:0000956;1.33e-15;25!UBERON:0000203;1.33e-15;25!UBERON:0002780;5.73e-12;41!UBERON:0001890;5.73e-12;41!UBERON:0001872;2.68e-09;5!UBERON:0000955;4.96e-09;68!UBERON:0001017;5.92e-09;75!UBERON:0000073;2.34e-07;53!UBERON:0002616;2.34e-07;53!UBERON:0001871;6.83e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.41e-21,32;UBERON:0001950,5.45e-21,20;UBERON:0001893,4.37e-20,34;UBERON:0003528,5.91e-20,34;UBERON:0002020,5.91e-20,34;UBERON:0002791,6.80e-19,32;UBERON:0002619,7.02e-19,22;UBERON:0002780,6.14e-18,41;UBERON:0001890,6.14e-18,41;UBERON:0003080,6.14e-18,41;UBERON:0006240,6.14e-18,41;UBERON:0000956,2.50e-16,25;UBERON:0000203,2.50e-16,25;UBERON:0000955,6.87e-16,68;UBERON:0006238,6.87e-16,68;UBERON:0001017,2.85e-15,81;UBERON:0001049,3.74e-15,56;UBERON:0005068,3.74e-15,56;UBERON:0006241,3.74e-15,56;UBERON:0007135,3.74e-15,56;UBERON:0000073,1.50e-14,53;UBERON:0002616,1.50e-14,53;UBERON:0001016,2.26e-14,89;UBERON:0007023,6.90e-14,114;UBERON:0003056,1.14e-10,61;UBERON:0001872,6.35e-10,5;UBERON:0003075,6.67e-10,82;UBERON:0007284,6.67e-10,82;UBERON:0002346,3.25e-09,86;UBERON:0001871,5.20e-07,6;UBERON:0010371,8.41e-07,104 | |||
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| ||
|short_description=p6@BRP44 | |||
}} | }} |
Latest revision as of 11:45, 18 September 2015
Short description: | p6@BRP44 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_BRP44_5end |
Coexpression cluster: | NA |
Association with transcript: | 36bp_to_uc001ges.2_5end |
EntrezGene: | BRP44 |
HGNC: | 24515 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebral hemisphere | 1.41e-21 | 32 |
neocortex | 5.45e-21 | 20 |
telencephalon | 4.37e-20 | 34 |
brain grey matter | 5.91e-20 | 34 |
gray matter | 5.91e-20 | 34 |
regional part of telencephalon | 6.80e-19 | 32 |
regional part of cerebral cortex | 7.02e-19 | 22 |
regional part of forebrain | 6.14e-18 | 41 |
forebrain | 6.14e-18 | 41 |
anterior neural tube | 6.14e-18 | 41 |
future forebrain | 6.14e-18 | 41 |
cerebral cortex | 2.50e-16 | 25 |
pallium | 2.50e-16 | 25 |
brain | 6.87e-16 | 68 |
future brain | 6.87e-16 | 68 |
central nervous system | 2.85e-15 | 81 |
neural tube | 3.74e-15 | 56 |
neural rod | 3.74e-15 | 56 |
future spinal cord | 3.74e-15 | 56 |
neural keel | 3.74e-15 | 56 |
regional part of nervous system | 1.50e-14 | 53 |
regional part of brain | 1.50e-14 | 53 |
nervous system | 2.26e-14 | 89 |
adult organism | 6.90e-14 | 114 |
pre-chordal neural plate | 1.14e-10 | 61 |
parietal lobe | 6.35e-10 | 5 |
neural plate | 6.67e-10 | 82 |
presumptive neural plate | 6.67e-10 | 82 |
neurectoderm | 3.25e-09 | 86 |
temporal lobe | 5.20e-07 | 6 |
ecto-epithelium | 8.41e-07 | 104 |