FFCP PHASE1:Hg19::chr21:42608536..42608555,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25825 | |EntrezGene=25825 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=934 | |HGNC=934 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000465326_5end | |association_with_transcript=0bp_to_ENST00000465326_5end | ||
|cluster_id=chr21:42608536..42608555,+ | |||
|coexpression_cluster_id=C106 | |coexpression_cluster_id=C106 | ||
|description=CAGE_peak_12_at_BACE2_5end | |description=CAGE_peak_12_at_BACE2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000159!1.74e-13!2;CL:0000313!1.07e-07!1;CL:0000319!1.80e-07!1 | |ontology_enrichment_celltype=CL:0000159!1.74e-13!2;CL:0000313!1.07e-07!1;CL:0000319!1.80e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000313;3.14e-14;1!CL:0000159;9.19e-08;2 | |ontology_enrichment_celltype_v019=CL:0000313;3.14e-14;1!CL:0000159;9.19e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000313,3.15e-14,1;CL:0000159,9.19e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.57e-36;29!UBERON:0003124;5.42e-15;1!UBERON:0006595;1.72e-08;86 | |ontology_enrichment_development_v019=UBERON:0008947;5.57e-36;29!UBERON:0003124;5.42e-15;1!UBERON:0006595;1.72e-08;86 | ||
|ontology_enrichment_disease=DOID:305!1.56e-10!106;DOID:2152!1.07e-07!1;DOID:3030!1.80e-07!1;DOID:8552!2.47e-07!1;DOID:0050687!4.83e-07!143 | |ontology_enrichment_disease=DOID:305!1.56e-10!106;DOID:2152!1.07e-07!1;DOID:3030!1.80e-07!1;DOID:8552!2.47e-07!1;DOID:0050687!4.83e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:2152;3.14e-14;1 | |ontology_enrichment_disease_v019=DOID:2152;3.14e-14;1 | ||
|ontology_enrichment_disease_v019_2=DOID:2152,3.15e-14,1;DOID:305,6.53e-14,106;DOID:0050687,5.65e-10,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.32e-57!9;UBERON:0001557!2.02e-26!19;UBERON:0008947!2.68e-15!38;UBERON:0003258!2.68e-15!38;UBERON:0000072!2.50e-12!46;UBERON:0000065!1.82e-10!53;UBERON:0000077!4.84e-08!130;UBERON:0004911!1.07e-07!1;UBERON:0001000!1.39e-07!1;UBERON:0005352!1.39e-07!1;UBERON:0001004!3.02e-07!72;UBERON:0001041!3.40e-07!98 | |ontology_enrichment_uberon=UBERON:0001737!2.32e-57!9;UBERON:0001557!2.02e-26!19;UBERON:0008947!2.68e-15!38;UBERON:0003258!2.68e-15!38;UBERON:0000072!2.50e-12!46;UBERON:0000065!1.82e-10!53;UBERON:0000077!4.84e-08!130;UBERON:0004911!1.07e-07!1;UBERON:0001000!1.39e-07!1;UBERON:0005352!1.39e-07!1;UBERON:0001004!3.02e-07!72;UBERON:0001041!3.40e-07!98 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.19e-117;9!UBERON:0001557;2.19e-117;9!UBERON:0000072;3.96e-26;37!UBERON:0000065;5.15e-22;44!UBERON:0004911;3.14e-14;1!UBERON:0001004;1.38e-11;65!UBERON:0004909;9.19e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0001737;2.19e-117;9!UBERON:0001557;2.19e-117;9!UBERON:0000072;3.96e-26;37!UBERON:0000065;5.15e-22;44!UBERON:0004911;3.14e-14;1!UBERON:0001004;1.38e-11;65!UBERON:0004909;9.19e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.20e-117,9;UBERON:0001557,2.05e-55,19;UBERON:0008947,2.46e-27,38;UBERON:0003258,2.46e-27,38;UBERON:0000072,6.09e-22,47;UBERON:0000065,5.51e-19,54;UBERON:0004911,3.15e-14,1;UBERON:0001041,3.30e-14,87;UBERON:0001004,1.32e-13,74;UBERON:0004921,4.44e-10,118;UBERON:0001048,9.02e-09,160;UBERON:0004119,9.31e-09,160;UBERON:0000925,9.31e-09,160;UBERON:0006595,9.31e-09,160;UBERON:0001007,5.41e-08,145;UBERON:0001555,5.41e-08,145;UBERON:0007026,5.41e-08,145;UBERON:0004909,9.19e-08,2 | |||
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|short_description=p12@BACE2 | |short_description=p12@BACE2 | ||
}} | }} |
Latest revision as of 12:45, 18 September 2015
Short description: | p12@BACE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_BACE2_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | 0bp_to_ENST00000465326_5end |
EntrezGene: | BACE2 |
HGNC: | 934 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 3.15e-14 | 1 |
seromucus secreting cell | 9.19e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.20e-117 | 9 |
upper respiratory tract | 2.05e-55 | 19 |
respiratory primordium | 2.46e-27 | 38 |
endoderm of foregut | 2.46e-27 | 38 |
segment of respiratory tract | 6.09e-22 | 47 |
respiratory tract | 5.51e-19 | 54 |
epithelium of female gonad | 3.15e-14 | 1 |
foregut | 3.30e-14 | 87 |
respiratory system | 1.32e-13 | 74 |
subdivision of digestive tract | 4.44e-10 | 118 |
primordium | 9.02e-09 | 160 |
endoderm-derived structure | 9.31e-09 | 160 |
endoderm | 9.31e-09 | 160 |
presumptive endoderm | 9.31e-09 | 160 |
digestive system | 5.41e-08 | 145 |
digestive tract | 5.41e-08 | 145 |
primitive gut | 5.41e-08 | 145 |
epithelium of gonad | 9.19e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 3.15e-14 | 1 |
carcinoma | 6.53e-14 | 106 |
cell type cancer | 5.65e-10 | 143 |