FFCP PHASE1:Hg19::chr21:43815504..43815514,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64699 | |EntrezGene=64699 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11877 | |HGNC=11877 | ||
|TSSclassifier=strong | |||
|UniProt=P57727 | |UniProt=P57727 | ||
|association_with_transcript=40bp_to_BC074846,BC074847_5end | |association_with_transcript=40bp_to_BC074846,BC074847_5end | ||
|cluster_id=chr21:43815504..43815514,- | |||
|coexpression_cluster_id=C74 | |coexpression_cluster_id=C74 | ||
|description=CAGE_peak_8_at_TMPRSS3_5end | |description=CAGE_peak_8_at_TMPRSS3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002178;1.03e-17;3 | |ontology_enrichment_celltype_v019=CL:0002178;1.03e-17;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.12e-17,3 | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.89e-08;7 | |ontology_enrichment_development_v019=UBERON:0004872;1.89e-08;7 | ||
|ontology_enrichment_disease=DOID:12603!6.47e-17!1;DOID:3493!4.34e-09!2;DOID:305!1.39e-08!106;DOID:0060058!4.52e-07!10;DOID:162!8.83e-07!235 | |ontology_enrichment_disease=DOID:12603!6.47e-17!1;DOID:3493!4.34e-09!2;DOID:305!1.39e-08!106;DOID:0060058!4.52e-07!10;DOID:162!8.83e-07!235 | ||
|ontology_enrichment_disease_v019=DOID:12603;5.12e-50;1!DOID:3493;8.10e-26;2!DOID:3119;3.53e-15;14 | |ontology_enrichment_disease_v019=DOID:12603;5.12e-50;1!DOID:3493;8.10e-26;2!DOID:3119;3.53e-15;14 | ||
|ontology_enrichment_disease_v019_2=DOID:12603,3.99e-50,1;DOID:3493,9.18e-26,2;DOID:3119,3.66e-15,14 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.98e-27!9;UBERON:0002106!2.41e-21!3;UBERON:0004854!2.41e-21!3;UBERON:0009034!2.41e-21!3;UBERON:0002095!2.41e-21!3;UBERON:0004782!2.41e-21!3;UBERON:0003281!2.41e-21!3;UBERON:0009664!2.41e-21!3;UBERON:0002296!2.41e-21!3;UBERON:0005602!2.41e-21!3;UBERON:0001179!2.41e-21!3;UBERON:0006293!2.41e-21!3;UBERON:0000945!6.63e-18!8;UBERON:0010039!6.63e-18!8;UBERON:0001557!4.08e-13!19;UBERON:0004177!1.04e-09!7;UBERON:0001041!3.59e-07!98 | |ontology_enrichment_uberon=UBERON:0001737!2.98e-27!9;UBERON:0002106!2.41e-21!3;UBERON:0004854!2.41e-21!3;UBERON:0009034!2.41e-21!3;UBERON:0002095!2.41e-21!3;UBERON:0004782!2.41e-21!3;UBERON:0003281!2.41e-21!3;UBERON:0009664!2.41e-21!3;UBERON:0002296!2.41e-21!3;UBERON:0005602!2.41e-21!3;UBERON:0001179!2.41e-21!3;UBERON:0006293!2.41e-21!3;UBERON:0000945!6.63e-18!8;UBERON:0010039!6.63e-18!8;UBERON:0001557!4.08e-13!19;UBERON:0004177!1.04e-09!7;UBERON:0001041!3.59e-07!98 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;6.76e-18;3!UBERON:0004177;2.66e-11;5!UBERON:0005057;2.66e-11;5!UBERON:0000945;3.42e-11;5!UBERON:0010039;3.42e-11;5 | |ontology_enrichment_uberon_v019=UBERON:0002106;6.76e-18;3!UBERON:0004177;2.66e-11;5!UBERON:0005057;2.66e-11;5!UBERON:0000945;3.42e-11;5!UBERON:0010039;3.42e-11;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,1.11e-25,8;UBERON:0010039,1.11e-25,8;UBERON:0002106,6.76e-18,3;UBERON:0004854,6.76e-18,3;UBERON:0009034,6.76e-18,3;UBERON:0002095,6.76e-18,3;UBERON:0004782,6.76e-18,3;UBERON:0003281,6.76e-18,3;UBERON:0009664,6.76e-18,3;UBERON:0002296,6.76e-18,3;UBERON:0005602,6.76e-18,3;UBERON:0001179,6.76e-18,3;UBERON:0006293,6.76e-18,3;UBERON:0005409,1.11e-08,25;UBERON:0004177,1.89e-08,7;UBERON:0005057,1.89e-08,7 | |||
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|short_description=p8@TMPRSS3 | |short_description=p8@TMPRSS3 | ||
}} | }} |
Latest revision as of 14:17, 18 September 2015
Short description: | p8@TMPRSS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_TMPRSS3_5end |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | 40bp_to_BC074846, BC074847_5end |
EntrezGene: | TMPRSS3 |
HGNC: | 11877 |
UniProt: | P57727 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.12e-17 | 3 |
Ontology term | p-value | n |
---|---|---|
stomach | 1.11e-25 | 8 |
food storage organ | 1.11e-25 | 8 |
spleen | 6.76e-18 | 3 |
gastrointestinal system mesentery | 6.76e-18 | 3 |
stomach region | 6.76e-18 | 3 |
mesentery | 6.76e-18 | 3 |
gastrointestinal system serosa | 6.76e-18 | 3 |
mesentery of stomach | 6.76e-18 | 3 |
gut mesentery | 6.76e-18 | 3 |
dorsal mesentery | 6.76e-18 | 3 |
dorsal mesogastrium | 6.76e-18 | 3 |
peritoneal cavity | 6.76e-18 | 3 |
spleen primordium | 6.76e-18 | 3 |
gastrointestinal system | 1.11e-08 | 25 |
hemopoietic organ | 1.89e-08 | 7 |
immune organ | 1.89e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 3.99e-50 | 1 |
signet ring cell adenocarcinoma | 9.18e-26 | 2 |
gastrointestinal system cancer | 3.66e-15 | 14 |