FFCP PHASE1:Hg19::chr4:74735102..74735117,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2919 | |EntrezGene=2919 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4602 | |HGNC=4602 | ||
|TSSclassifier=strong | |||
|UniProt=P09341 | |UniProt=P09341 | ||
|association_with_transcript=0bp_to_ENST00000509101,NM_001511,uc003hhh.1_5end | |association_with_transcript=0bp_to_ENST00000509101,NM_001511,uc003hhh.1_5end | ||
|cluster_id=chr4:74735102..74735117,+ | |||
|coexpression_cluster_id=C773 | |||
|description=CAGE_peak_1_at_CXCL1_5end | |description=CAGE_peak_1_at_CXCL1_5end | ||
|id=chr4:74735102..74735117,+ | |id=chr4:74735102..74735117,+ | ||
|ontology_enrichment_celltype=CL:0000222!6.43e-22!119;CL:0000220!7.85e-20!246;CL:0002321!2.77e-19!248;CL:0000680!1.25e-17!57;CL:0000056!1.25e-17!57;CL:0000355!1.25e-17!57;CL:0000183!2.27e-17!59;CL:0000359!4.02e-17!32;CL:0000187!1.95e-16!54;CL:0000192!1.10e-15!42;CL:0000514!1.10e-15!42;CL:0000393!9.67e-15!60;CL:0000211!9.67e-15!60;CL:0002371!9.87e-13!591;CL:0000055!4.49e-11!180;CL:0000144!2.35e-09!625;CL:0002078!5.18e-09!44;CL:0000115!7.97e-08!35;CL:0000548!1.08e-07!679;CL:0000004!1.08e-07!679;CL:0000255!1.08e-07!679;CL:0000012!1.21e-07!682;CL:0002139!2.06e-07!24;CL:0002539!4.23e-07!10;CL:0002494!7.28e-07!16 | |ontology_enrichment_celltype=CL:0000222!6.43e-22!119;CL:0000220!7.85e-20!246;CL:0002321!2.77e-19!248;CL:0000680!1.25e-17!57;CL:0000056!1.25e-17!57;CL:0000355!1.25e-17!57;CL:0000183!2.27e-17!59;CL:0000359!4.02e-17!32;CL:0000187!1.95e-16!54;CL:0000192!1.10e-15!42;CL:0000514!1.10e-15!42;CL:0000393!9.67e-15!60;CL:0000211!9.67e-15!60;CL:0002371!9.87e-13!591;CL:0000055!4.49e-11!180;CL:0000144!2.35e-09!625;CL:0002078!5.18e-09!44;CL:0000115!7.97e-08!35;CL:0000548!1.08e-07!679;CL:0000004!1.08e-07!679;CL:0000255!1.08e-07!679;CL:0000012!1.21e-07!682;CL:0002139!2.06e-07!24;CL:0002539!4.23e-07!10;CL:0002494!7.28e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.27e-16;32!CL:0000192;4.14e-11;43!CL:0000187;8.88e-09;55!CL:0000393;1.40e-07;61!CL:0000211;1.40e-07;61!CL:0002139;1.79e-07;24!CL:0002539;3.68e-07;10!CL:0000115;3.83e-07;36!CL:0002494;6.32e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.28e-22,121;CL:0002321,1.80e-19,250;CL:0000680,2.67e-17,58;CL:0000056,2.67e-17,58;CL:0000355,2.67e-17,58;CL:0000359,2.80e-17,32;CL:0000187,4.19e-16,55;CL:0000192,2.89e-15,43;CL:0000514,2.89e-15,43;CL:0000393,1.82e-14,61;CL:0000211,1.82e-14,61;CL:0002078,2.61e-09,45;CL:0000115,3.30e-08,36;CL:0002139,1.80e-07,24;CL:0002539,3.72e-07,10;CL:0002494,6.43e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;4.14e-11;43!CL:0000355;2.05e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.29e-26!79;UBERON:0007798!1.29e-26!79;UBERON:0004535!1.50e-26!110;UBERON:0001009!2.78e-26!113;UBERON:0004872!7.22e-23!84;UBERON:0000055!9.97e-23!69;UBERON:0003914!1.92e-21!118;UBERON:0001981!5.76e-21!60;UBERON:0007500!5.76e-21!60;UBERON:0004537!5.76e-21!60;UBERON:0006965!5.76e-21!60;UBERON:0001637!6.83e-21!42;UBERON:0003509!6.83e-21!42;UBERON:0004572!6.83e-21!42;UBERON:0000467!7.33e-19!625;UBERON:0000480!1.69e-18!626;UBERON:0000486!3.11e-18!82;UBERON:0000119!1.57e-17!312;UBERON:0000468!1.60e-17!659;UBERON:0000923!4.42e-17!604;UBERON:0005291!4.42e-17!604;UBERON:0006598!4.42e-17!604;UBERON:0002532!4.42e-17!604;UBERON:0002050!5.78e-17!605;UBERON:0005423!5.78e-17!605;UBERON:0000926!8.80e-17!448;UBERON:0004120!8.80e-17!448;UBERON:0006603!8.80e-17!448;UBERON:0000483!9.56e-17!309;UBERON:0004573!1.05e-16!33;UBERON:0004571!1.05e-16!33;UBERON:0000922!1.66e-16!612;UBERON:0005256!2.52e-16!143;UBERON:0000914!3.38e-16!83;UBERON:0002329!3.38e-16!83;UBERON:0003077!3.38e-16!83;UBERON:0003059!3.38e-16!83;UBERON:0007282!3.38e-16!83;UBERON:0009618!3.38e-16!83;UBERON:0007285!3.38e-16!83;UBERON:0004290!3.74e-16!70;UBERON:0003081!7.34e-16!216;UBERON:0001134!8.61e-16!61;UBERON:0002036!8.61e-16!61;UBERON:0003082!8.61e-16!61;UBERON:0000490!2.51e-15!138;UBERON:0002385!3.68e-15!63;UBERON:0001015!3.68e-15!63;UBERON:0000383!3.68e-15!63;UBERON:0000477!1.89e-14!286;UBERON:0004111!2.44e-14!241;UBERON:0000481!2.60e-12!347;UBERON:0002100!2.26e-11!216;UBERON:0003104!8.68e-11!238;UBERON:0009142!8.68e-11!238;UBERON:0002204!9.09e-11!167;UBERON:0000025!1.75e-09!194;UBERON:0000947!3.58e-09!21;UBERON:0010191!3.58e-09!21;UBERON:0000475!3.33e-08!365;UBERON:0003103!1.55e-07!69;UBERON:0004237!4.23e-07!10;UBERON:0004695!4.23e-07!10;UBERON:0002111!4.23e-07!10;UBERON:0004178!4.23e-07!10 | |ontology_enrichment_uberon=UBERON:0002049!1.29e-26!79;UBERON:0007798!1.29e-26!79;UBERON:0004535!1.50e-26!110;UBERON:0001009!2.78e-26!113;UBERON:0004872!7.22e-23!84;UBERON:0000055!9.97e-23!69;UBERON:0003914!1.92e-21!118;UBERON:0001981!5.76e-21!60;UBERON:0007500!5.76e-21!60;UBERON:0004537!5.76e-21!60;UBERON:0006965!5.76e-21!60;UBERON:0001637!6.83e-21!42;UBERON:0003509!6.83e-21!42;UBERON:0004572!6.83e-21!42;UBERON:0000467!7.33e-19!625;UBERON:0000480!1.69e-18!626;UBERON:0000486!3.11e-18!82;UBERON:0000119!1.57e-17!312;UBERON:0000468!1.60e-17!659;UBERON:0000923!4.42e-17!604;UBERON:0005291!4.42e-17!604;UBERON:0006598!4.42e-17!604;UBERON:0002532!4.42e-17!604;UBERON:0002050!5.78e-17!605;UBERON:0005423!5.78e-17!605;UBERON:0000926!8.80e-17!448;UBERON:0004120!8.80e-17!448;UBERON:0006603!8.80e-17!448;UBERON:0000483!9.56e-17!309;UBERON:0004573!1.05e-16!33;UBERON:0004571!1.05e-16!33;UBERON:0000922!1.66e-16!612;UBERON:0005256!2.52e-16!143;UBERON:0000914!3.38e-16!83;UBERON:0002329!3.38e-16!83;UBERON:0003077!3.38e-16!83;UBERON:0003059!3.38e-16!83;UBERON:0007282!3.38e-16!83;UBERON:0009618!3.38e-16!83;UBERON:0007285!3.38e-16!83;UBERON:0004290!3.74e-16!70;UBERON:0003081!7.34e-16!216;UBERON:0001134!8.61e-16!61;UBERON:0002036!8.61e-16!61;UBERON:0003082!8.61e-16!61;UBERON:0000490!2.51e-15!138;UBERON:0002385!3.68e-15!63;UBERON:0001015!3.68e-15!63;UBERON:0000383!3.68e-15!63;UBERON:0000477!1.89e-14!286;UBERON:0004111!2.44e-14!241;UBERON:0000481!2.60e-12!347;UBERON:0002100!2.26e-11!216;UBERON:0003104!8.68e-11!238;UBERON:0009142!8.68e-11!238;UBERON:0002204!9.09e-11!167;UBERON:0000025!1.75e-09!194;UBERON:0000947!3.58e-09!21;UBERON:0010191!3.58e-09!21;UBERON:0000475!3.33e-08!365;UBERON:0003103!1.55e-07!69;UBERON:0004237!4.23e-07!10;UBERON:0004695!4.23e-07!10;UBERON:0002111!4.23e-07!10;UBERON:0004178!4.23e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.21e-15;33!UBERON:0004571;2.21e-15;33!UBERON:0001637;4.05e-15;42!UBERON:0003509;4.05e-15;42!UBERON:0004572;4.05e-15;42!UBERON:0007500;1.24e-11;56!UBERON:0001981;1.24e-11;56!UBERON:0004537;1.24e-11;56!UBERON:0002049;1.97e-11;75!UBERON:0007798;1.97e-11;75!UBERON:0000055;2.41e-11;65!UBERON:0003914;3.36e-10;74!UBERON:0000947;2.92e-09;21!UBERON:0010191;2.92e-09;21!UBERON:0004535;1.69e-07;109!UBERON:0004237;3.68e-07;10!UBERON:0004695;3.68e-07;10!UBERON:0002111;3.68e-07;10!UBERON:0004178;3.68e-07;10!UBERON:0001009;6.27e-07;112 | |||
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| ||
|short_description=p1@CXCL1 | |short_description=p1@CXCL1 | ||
}} | }} |
Latest revision as of 14:47, 18 September 2015
Short description: | p1@CXCL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CXCL1_5end |
Coexpression cluster: | C773_Smooth_mesenchymal_Hair_Lymphatic_Preadipocyte_Aortic_anaplastic |
Association with transcript: | 0bp_to_ENST00000509101, NM_001511, uc003hhh.1_5end |
EntrezGene: | CXCL1 |
HGNC: | 4602 |
UniProt: | P09341 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.28e-22 | 121 |
embryonic cell | 1.80e-19 | 250 |
muscle precursor cell | 2.67e-17 | 58 |
myoblast | 2.67e-17 | 58 |
multi-potent skeletal muscle stem cell | 2.67e-17 | 58 |
vascular associated smooth muscle cell | 2.80e-17 | 32 |
muscle cell | 4.19e-16 | 55 |
smooth muscle cell | 2.89e-15 | 43 |
smooth muscle myoblast | 2.89e-15 | 43 |
electrically responsive cell | 1.82e-14 | 61 |
electrically active cell | 1.82e-14 | 61 |
meso-epithelial cell | 2.61e-09 | 45 |
endothelial cell | 3.30e-08 | 36 |
endothelial cell of vascular tree | 1.80e-07 | 24 |
aortic smooth muscle cell | 3.72e-07 | 10 |
cardiocyte | 6.43e-07 | 16 |