FFCP PHASE1:Hg19::chr19:46002982..46002998,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=147699 | |EntrezGene=147699 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26845 | |HGNC=26845 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=114bp_to_ENST00000396735,uc002pcf.2_5end | |association_with_transcript=114bp_to_ENST00000396735,uc002pcf.2_5end | ||
|cluster_id=chr19:46002982..46002998,+ | |||
|coexpression_cluster_id=C925 | |coexpression_cluster_id=C925 | ||
|description=CAGE_peak_8_at_PPM1N_5end | |description=CAGE_peak_8_at_PPM1N_5end | ||
|id=chr19:46002982..46002998,+ | |id=chr19:46002982..46002998,+ | ||
|ontology_enrichment_celltype=CL:0000039!6.03e-33!7;CL:0000586!6.03e-33!7;CL:0002322!3.90e-23!5;CL:0000540!1.17e-07!6;CL:0000031!1.17e-07!6;CL:0000404!1.17e-07!6 | |ontology_enrichment_celltype=CL:0000039!6.03e-33!7;CL:0000586!6.03e-33!7;CL:0002322!3.90e-23!5;CL:0000540!1.17e-07!6;CL:0000031!1.17e-07!6;CL:0000404!1.17e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000039;5.54e-101;7!CL:0000586;5.54e-101;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.29e-101,7;CL:0000586,4.29e-101,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.86e-32;10!UBERON:0005564;4.86e-32;10 | |||
|ontology_enrichment_disease=DOID:3095!1.22e-12!22;DOID:2994!1.22e-12!22 | |ontology_enrichment_disease=DOID:3095!1.22e-12!22;DOID:2994!1.22e-12!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;2.67e-32;22!DOID:2994;2.67e-32;22!DOID:1799;1.53e-21;1!DOID:10165;1.53e-21;1!DOID:1798;1.53e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.46e-32,22;DOID:2994,2.46e-32,22;DOID:1799,1.53e-21,1;DOID:10165,1.53e-21,1;DOID:1798,1.53e-21,1 | |||
|ontology_enrichment_uberon=UBERON:0003135!9.73e-11!11;UBERON:0004177!5.18e-10!7;UBERON:0000473!6.34e-10!8;UBERON:0002106!8.82e-07!3;UBERON:0004854!8.82e-07!3;UBERON:0009034!8.82e-07!3;UBERON:0002095!8.82e-07!3;UBERON:0004782!8.82e-07!3;UBERON:0003281!8.82e-07!3;UBERON:0009664!8.82e-07!3;UBERON:0002296!8.82e-07!3;UBERON:0005602!8.82e-07!3;UBERON:0001179!8.82e-07!3;UBERON:0006293!8.82e-07!3 | |ontology_enrichment_uberon=UBERON:0003135!9.73e-11!11;UBERON:0004177!5.18e-10!7;UBERON:0000473!6.34e-10!8;UBERON:0002106!8.82e-07!3;UBERON:0004854!8.82e-07!3;UBERON:0009034!8.82e-07!3;UBERON:0002095!8.82e-07!3;UBERON:0004782!8.82e-07!3;UBERON:0003281!8.82e-07!3;UBERON:0009664!8.82e-07!3;UBERON:0002296!8.82e-07!3;UBERON:0005602!8.82e-07!3;UBERON:0001179!8.82e-07!3;UBERON:0006293!8.82e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.75e-40;8!UBERON:0003135;3.53e-29;11!UBERON:0007195;5.71e-21;1!UBERON:0000991;1.61e-15;21!UBERON:0003101;7.84e-15;22!UBERON:0000079;7.84e-15;22!UBERON:0002323;2.45e-10;45!UBERON:0000922;2.08e-07;49!UBERON:0002553;9.28e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.86e-40,8;UBERON:0003135,3.93e-29,11;UBERON:0007195,6.31e-21,1;UBERON:0000991,1.71e-15,21;UBERON:0009196,1.71e-15,21;UBERON:0009117,1.71e-15,21;UBERON:0005564,1.71e-15,21;UBERON:0004176,8.27e-15,22;UBERON:0003101,8.27e-15,22;UBERON:0000079,8.27e-15,22;UBERON:0002323,5.79e-11,46;UBERON:0004458,2.67e-10,49;UBERON:0003886,2.36e-09,54;UBERON:0002553,2.74e-08,61;UBERON:0003133,5.74e-07,48 | |||
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| ||
|short_description=p8@PPM1N | |short_description=p8@PPM1N | ||
}} | }} |
Latest revision as of 18:23, 18 September 2015
Short description: | p8@PPM1N |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PPM1N_5end |
Coexpression cluster: | C925_testicular_pancreatic_choriocarcinoma_placenta_H9_chorionic_hepatoblastoma |
Association with transcript: | 114bp_to_ENST00000396735, uc002pcf.2_5end |
EntrezGene: | PPM1N |
HGNC: | 26845 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.29e-101 | 7 |
germ cell | 4.29e-101 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 7.86e-40 | 8 |
male reproductive organ | 3.93e-29 | 11 |
stroma of bone marrow | 6.31e-21 | 1 |
gonad | 1.71e-15 | 21 |
indifferent external genitalia | 1.71e-15 | 21 |
indifferent gonad | 1.71e-15 | 21 |
gonad primordium | 1.71e-15 | 21 |
external genitalia | 8.27e-15 | 22 |
male organism | 8.27e-15 | 22 |
male reproductive system | 8.27e-15 | 22 |
body cavity | 5.79e-11 | 46 |
body cavity or lining | 2.67e-10 | 49 |
body cavity precursor | 2.36e-09 | 54 |
anatomical cavity | 2.74e-08 | 61 |
reproductive organ | 5.74e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.46e-32 | 22 |
germ cell cancer | 2.46e-32 | 22 |
islet cell tumor | 1.53e-21 | 1 |
endocrine pancreas cancer | 1.53e-21 | 1 |
pancreatic endocrine carcinoma | 1.53e-21 | 1 |