FFCP PHASE1:Hg19::chr1:174128536..174128545,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:174128536..174128545,+
|short_description=p27@RABGAP1L
|description=CAGE_peak_27_at_RABGAP1L_5end
|association_with_transcript=-2bp_to_ENST00000357444,ENST...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9910 | |EntrezGene=9910 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24663 | |HGNC=24663 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JZA9 | |UniProt=Q5JZA9 | ||
|association_with_transcript=-2bp_to_ENST00000357444,ENST00000367689_5end | |||
|cluster_id=chr1:174128536..174128545,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_27_at_RABGAP1L_5end | |||
|id=chr1:174128536..174128545,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000222;1.22e-14;1!CL:0000764;5.74e-08;2!CL:0000558;5.74e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,6.58e-08,2;CL:0000765,6.58e-08,2;CL:0000050,6.58e-08,2;CL:0000038,6.58e-08,2;CL:0000558,6.58e-08,2;CL:0000547,6.58e-08,2;CL:0000549,6.58e-08,2;CL:0000550,6.58e-08,2;CL:0000552,6.58e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.90e-40;3!UBERON:0006601;9.86e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.87e-44!57;UBERON:0005068!1.87e-44!57;UBERON:0006241!1.87e-44!57;UBERON:0007135!1.87e-44!57;UBERON:0007023!1.46e-39!115;UBERON:0002616!4.81e-38!59;UBERON:0003075!2.86e-35!86;UBERON:0007284!2.86e-35!86;UBERON:0002346!1.51e-34!90;UBERON:0002780!2.42e-34!41;UBERON:0001890!2.42e-34!41;UBERON:0006240!2.42e-34!41;UBERON:0003080!2.79e-33!42;UBERON:0001017!2.31e-32!82;UBERON:0000955!7.70e-32!69;UBERON:0006238!7.70e-32!69;UBERON:0005743!1.29e-31!86;UBERON:0000073!8.63e-30!94;UBERON:0001016!8.63e-30!94;UBERON:0001893!1.81e-27!34;UBERON:0002020!2.45e-27!34;UBERON:0003528!2.45e-27!34;UBERON:0002791!6.33e-26!33;UBERON:0001869!4.72e-25!32;UBERON:0001950!1.44e-23!20;UBERON:0002619!1.50e-23!22;UBERON:0003056!4.21e-21!61;UBERON:0000956!4.28e-20!25;UBERON:0000203!4.28e-20!25;UBERON:0000153!4.25e-16!129;UBERON:0007811!4.25e-16!129;UBERON:0000033!8.54e-16!123;UBERON:0000924!1.55e-14!173;UBERON:0006601!1.55e-14!173;UBERON:0004121!1.78e-14!169;UBERON:0003076!5.37e-12!15;UBERON:0003057!5.37e-12!15;UBERON:0000025!5.99e-11!194;UBERON:0000200!7.81e-11!6;UBERON:0004733!1.59e-10!12;UBERON:0002028!1.59e-10!12;UBERON:0007277!1.59e-10!12;UBERON:0004732!1.53e-09!13;UBERON:0002021!5.05e-09!5;UBERON:0002680!5.16e-09!9;UBERON:0001895!5.16e-09!9;UBERON:0010092!5.16e-09!9;UBERON:0002308!1.13e-08!9;UBERON:0000125!1.13e-08!9;UBERON:0004111!1.93e-08!241;UBERON:0001894!2.60e-08!7;UBERON:0006222!2.60e-08!7;UBERON:0000369!1.45e-07!4;UBERON:0002435!1.45e-07!4;UBERON:0000204!1.45e-07!4;UBERON:0010082!1.45e-07!4;UBERON:0003296!2.11e-07!4;UBERON:0010133!2.11e-07!4;UBERON:0002298!2.49e-07!8;UBERON:0000477!2.99e-07!286;UBERON:0000119!3.78e-07!312;UBERON:0000064!4.00e-07!219;UBERON:0001871!4.07e-07!7;UBERON:0000483!5.29e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.43e-30;20!UBERON:0002619;1.14e-27;22!UBERON:0000956;1.98e-24;25!UBERON:0000203;1.98e-24;25!UBERON:0002680;7.50e-24;9!UBERON:0001895;7.50e-24;9!UBERON:0001869;1.44e-22;32!UBERON:0001893;6.23e-22;34!UBERON:0000073;6.50e-21;53!UBERON:0002616;6.50e-21;53!UBERON:0002037;1.62e-20;6!UBERON:0002780;2.26e-19;41!UBERON:0001890;2.26e-19;41!UBERON:0004733;5.53e-18;12!UBERON:0002028;5.53e-18;12!UBERON:0002791;6.41e-18;32!UBERON:0004732;1.26e-16;13!UBERON:0003528;2.33e-15;34!UBERON:0002020;2.33e-15;34!UBERON:0002022;1.22e-14;1!UBERON:0007190;1.22e-14;1!UBERON:0000955;9.57e-13;68!UBERON:0007023;7.91e-12;114!UBERON:0001016;1.20e-11;83!UBERON:0001872;1.34e-11;5!UBERON:0002021;1.34e-11;5!UBERON:0001017;4.31e-10;75!UBERON:0001905;5.74e-08;2!UBERON:0002757;5.74e-08;2!UBERON:0010134;5.74e-08;2!UBERON:0005408;5.74e-08;2!UBERON:0001899;5.74e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.54e-40,53;UBERON:0002616,5.54e-40,53;UBERON:0001049,8.18e-38,56;UBERON:0005068,8.18e-38,56;UBERON:0006241,8.18e-38,56;UBERON:0007135,8.18e-38,56;UBERON:0000955,1.48e-30,68;UBERON:0006238,1.48e-30,68;UBERON:0001950,2.92e-30,20;UBERON:0002619,1.35e-27,22;UBERON:0001017,1.45e-25,81;UBERON:0003075,1.45e-25,82;UBERON:0007284,1.45e-25,82;UBERON:0001869,5.70e-25,32;UBERON:0002780,1.52e-24,41;UBERON:0001890,1.52e-24,41;UBERON:0003080,1.52e-24,41;UBERON:0006240,1.52e-24,41;UBERON:0000956,2.29e-24,25;UBERON:0000203,2.29e-24,25;UBERON:0002346,2.51e-24,86;UBERON:0002680,4.42e-24,9;UBERON:0001895,4.42e-24,9;UBERON:0010092,4.42e-24,9;UBERON:0001893,1.66e-23,34;UBERON:0001016,6.24e-23,89;UBERON:0007023,2.62e-21,114;UBERON:0002037,1.09e-20,6;UBERON:0006215,1.09e-20,6;UBERON:0010371,6.38e-20,104;UBERON:0002791,4.17e-19,32;UBERON:0004733,3.73e-18,12;UBERON:0002028,3.73e-18,12;UBERON:0007277,3.73e-18,12;UBERON:0003528,5.47e-18,34;UBERON:0002020,5.47e-18,34;UBERON:0004732,8.76e-17,13;UBERON:0003056,2.40e-16,61;UBERON:0010314,2.00e-15,132;UBERON:0007190,4.73e-15,1;UBERON:0002022,7.13e-15,1;UBERON:0003076,1.37e-14,15;UBERON:0003057,1.37e-14,15;UBERON:0001872,1.67e-11,5;UBERON:0002021,1.76e-11,5;UBERON:0004121,1.95e-11,171;UBERON:0000924,1.95e-11,171;UBERON:0006601,1.95e-11,171;UBERON:0000025,3.71e-10,192;UBERON:0011216,2.14e-08,223;UBERON:0004111,8.20e-08,240;UBERON:0001905,9.19e-08,2;UBERON:0002757,9.19e-08,2;UBERON:0010134,9.19e-08,2;UBERON:0005408,9.19e-08,2;UBERON:0001899,9.19e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0.950452044448374,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0.201504196455281,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,1.3071772551245,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0.170453254832202,0.0890320356467374,0.165284915360978,0.192190067365106,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0.191505370132367,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0,0,0.251932747854276,0,0,0,0,0,0,0.295930216910801,0,0,0,0.74214478529481,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.361789315876224,1.52581736317083,1.65868889896837,1.47773809476774,0.438770794307945,0.10893846351899,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0.123563938946503,0.104421949505455,0.269604531922708,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0,0,0.0821154570532092,0,0,0.677942222341597,0,0,1.70939149080872,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,1.64023802976667,0,0,0.157363764404994,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.39669780522807,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.610131324509816,0.625954653532499,0,0.665574309221114,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0.19998739585493,0.106691729694141,0,0,0,0,0.622077260032973,0.127894371303652,0.107824811396682,0,0,0,0.212574920101683,0,0,0,0.0788617450012534,0,0,0,0.834979926253974,1.41696576325585,0.478901577171454,1.23069818544453,0.252071696221718,0.622415272177961,0.968853873791107,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,1.75597720007826,1.56215619722769,0.620060389503552,1.14148458349032,0,0,0.496211178389294,0,0,1.07140367175657,0.336283722218824,0.606965604236632,0.455324382702595,0,0,0,1.63127359144396,0.920818829879887,0,0,0.078493092850514,0.628462359664008,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0.397901550322736,0,0.11294608203896,0,0,0,0,0.470317296361523,0,0,0.392616934229891,0,0.4226557275834,0,0,0.0644578879735772,0.0999411559249289,0,0,0,0.730336388246517,0,0.286679166302903,0,1.22384682343646,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.803892390468535,0,0.310298987585686,0,0.23806443146374,0,0.0620747142958579,0,0,0.404234377916439,0,0,0,0,0.332660356546013,0,0,0,0,0,0.366724332548599,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0.950452044448374,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0.201504196455281,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,1.3071772551245,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0.170453254832202,0.0890320356467374,0.165284915360978,0.192190067365106,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0.191505370132367,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0,0,0.251932747854276,0,0,0,0,0,0,0.295930216910801,0,0,0,0.74214478529481,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.361789315876224,1.52581736317083,1.65868889896837,1.47773809476774,0.438770794307945,0.10893846351899,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0.123563938946503,0.104421949505455,0.269604531922708,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0,0,0.0821154570532092,0,0,0.677942222341597,0,0,1.70939149080872,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,1.64023802976667,0,0,0.157363764404994,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.39669780522807,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.610131324509816,0.625954653532499,0,0.665574309221114,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0.19998739585493,0.106691729694141,0,0,0,0,0.622077260032973,0.127894371303652,0.107824811396682,0,0,0,0.212574920101683,0,0,0,0.0788617450012534,0,0,0,0.834979926253974,1.41696576325585,0.478901577171454,1.23069818544453,0.252071696221718,0.622415272177961,0.968853873791107,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,1.75597720007826,1.56215619722769,0.620060389503552,1.14148458349032,0,0,0.496211178389294,0,0,1.07140367175657,0.336283722218824,0.606965604236632,0.455324382702595,0,0,0,1.63127359144396,0.920818829879887,0,0,0.078493092850514,0.628462359664008,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0.397901550322736,0,0.11294608203896,0,0,0,0,0.470317296361523,0,0,0.392616934229891,0,0.4226557275834,0,0,0.0644578879735772,0.0999411559249289,0,0,0,0.730336388246517,0,0.286679166302903,0,1.22384682343646,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.803892390468535,0,0.310298987585686,0,0.23806443146374,0,0.0620747142958579,0,0,0.404234377916439,0,0,0,0,0.332660356546013,0,0,0,0,0,0.366724332548599,0,0,0,0 | ||
|short_description=p27@RABGAP1L | |||
}} | }} |
Latest revision as of 18:38, 18 September 2015
Short description: | p27@RABGAP1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_RABGAP1L_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -2bp_to_ENST00000357444, ENST00000367689_5end |
EntrezGene: | RABGAP1L |
HGNC: | 24663 |
UniProt: | Q5JZA9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 6.58e-08 | 2 |
erythroblast | 6.58e-08 | 2 |
megakaryocyte-erythroid progenitor cell | 6.58e-08 | 2 |
erythroid progenitor cell | 6.58e-08 | 2 |
reticulocyte | 6.58e-08 | 2 |
proerythroblast | 6.58e-08 | 2 |
basophilic erythroblast | 6.58e-08 | 2 |
polychromatophilic erythroblast | 6.58e-08 | 2 |
orthochromatic erythroblast | 6.58e-08 | 2 |