FFCP PHASE1:Hg19::chr12:51157837..51157892,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=466 | |EntrezGene=466 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=783 | |HGNC=783 | ||
|TSSclassifier=strong | |||
|UniProt=F8VRN2 | |UniProt=F8VRN2 | ||
|association_with_transcript=0bp_to_ENST00000549612_5end | |association_with_transcript=0bp_to_ENST00000549612_5end | ||
|cluster_id=chr12:51157837..51157892,+ | |||
|description=CAGE_peak_1_at_ATF1_5end | |description=CAGE_peak_1_at_ATF1_5end | ||
|id=chr12:51157837..51157892,+ | |id=chr12:51157837..51157892,+ | ||
|ontology_enrichment_celltype=CL:0000063!3.76e-07!578 | |ontology_enrichment_celltype=CL:0000063!3.76e-07!578 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.52e-07;29 | |||
|ontology_enrichment_disease=DOID:162!3.95e-26!235;DOID:14566!2.12e-25!239;DOID:0050687!3.25e-19!143;DOID:305!1.42e-16!106;DOID:0050686!2.25e-09!137 | |ontology_enrichment_disease=DOID:162!3.95e-26!235;DOID:14566!2.12e-25!239;DOID:0050687!3.25e-19!143;DOID:305!1.42e-16!106;DOID:0050686!2.25e-09!137 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.95e-26,235;DOID:14566,2.12e-25,239;DOID:0050687,3.25e-19,143;DOID:305,1.42e-16,106;DOID:0050686,2.25e-09,137 | |||
|ontology_enrichment_uberon=UBERON:0001007!1.88e-08!155;UBERON:0001555!1.88e-08!155;UBERON:0007026!1.88e-08!155;UBERON:0004119!5.54e-08!169;UBERON:0000925!5.54e-08!169;UBERON:0006595!5.54e-08!169;UBERON:0000077!2.22e-07!130 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,4.13e-07,145;UBERON:0001555,4.13e-07,145;UBERON:0007026,4.13e-07,145;UBERON:0004119,7.74e-07,160;UBERON:0000925,7.74e-07,160;UBERON:0006595,7.74e-07,160 | |||
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| ||
|short_description=p1@ATF1 | |short_description=p1@ATF1 | ||
}} | }} |
Latest revision as of 19:05, 18 September 2015
Short description: | p1@ATF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ATF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000549612_5end |
EntrezGene: | ATF1 |
HGNC: | 783 |
UniProt: | F8VRN2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
digestive system | 4.13e-07 | 145 |
digestive tract | 4.13e-07 | 145 |
primitive gut | 4.13e-07 | 145 |
endoderm-derived structure | 7.74e-07 | 160 |
endoderm | 7.74e-07 | 160 |
presumptive endoderm | 7.74e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.95e-26 | 235 |
disease of cellular proliferation | 2.12e-25 | 239 |
cell type cancer | 3.25e-19 | 143 |
carcinoma | 1.42e-16 | 106 |
organ system cancer | 2.25e-09 | 137 |