FFCP PHASE1:Hg19::chr8:65492584..65492595,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:65492584..65492595,+
|short_description=p9@BHLHE22
|description=CAGE_peak_9_at_BHLHE22_5end
|association_with_transcript=-199bp_to_NM_152414_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27319 | |EntrezGene=27319 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11963 | |HGNC=11963 | ||
|TSSclassifier=strong | |||
|UniProt=B4DF88,Q8NFJ8 | |UniProt=B4DF88,Q8NFJ8 | ||
|association_with_transcript=-199bp_to_NM_152414_5end | |||
|cluster_id=chr8:65492584..65492595,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_9_at_BHLHE22_5end | |||
|id=chr8:65492584..65492595,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;2.09e-10;6!CL:0000404;2.09e-10;6!CL:0002319;1.12e-08;25!CL:0000047;1.73e-08;2!CL:0000123;2.48e-08;2!CL:0000242;2.48e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.20e-16,8;CL:0000540,1.99e-10,6;CL:0000031,1.99e-10,6;CL:0000404,1.99e-10,6;CL:0002319,1.03e-08,25;CL:0000242,2.15e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000031;2.09e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!2.55e-25!22;UBERON:0001950!3.81e-24!20;UBERON:0000956!6.08e-22!25;UBERON:0000203!6.08e-22!25;UBERON:0001893!1.05e-19!34;UBERON:0007023!2.73e-19!115;UBERON:0001869!8.82e-19!32;UBERON:0002791!5.04e-18!33;UBERON:0000073!1.03e-17!94;UBERON:0001016!1.03e-17!94;UBERON:0005743!3.89e-17!86;UBERON:0001017!9.51e-17!82;UBERON:0002780!1.10e-15!41;UBERON:0001890!1.10e-15!41;UBERON:0006240!1.10e-15!41;UBERON:0002021!1.90e-15!5;UBERON:0002020!2.64e-15!34;UBERON:0003528!2.64e-15!34;UBERON:0003080!3.22e-15!42;UBERON:0001049!8.25e-15!57;UBERON:0005068!8.25e-15!57;UBERON:0006241!8.25e-15!57;UBERON:0007135!8.25e-15!57;UBERON:0000955!1.18e-12!69;UBERON:0006238!1.18e-12!69;UBERON:0002616!1.40e-12!59;UBERON:0003056!7.22e-12!61;UBERON:0003075!1.93e-11!86;UBERON:0007284!1.93e-11!86;UBERON:0000200!3.77e-11!6;UBERON:0002346!1.09e-10!90;UBERON:0004121!4.38e-09!169;UBERON:0000924!1.05e-08!173;UBERON:0006601!1.05e-08!173;UBERON:0002771!1.56e-08!3;UBERON:0000033!5.07e-08!123;UBERON:0000153!2.17e-07!129;UBERON:0007811!2.17e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.32e-15;22!UBERON:0000956;8.25e-14;25!UBERON:0000203;8.25e-14;25!UBERON:0002021;2.25e-12;5!UBERON:0001950;3.02e-11;20!UBERON:0002791;1.90e-10;32!UBERON:0001869;2.36e-10;32!UBERON:0003528;3.04e-09;34!UBERON:0002020;3.04e-09;34!UBERON:0001893;9.81e-09;34!UBERON:0001954;1.73e-08;2!UBERON:0003022;1.73e-08;2!UBERON:0002421;1.73e-08;2!UBERON:0002600;1.73e-08;2!UBERON:0001016;2.32e-08;83!UBERON:0002780;2.60e-08;41!UBERON:0001890;2.60e-08;41!UBERON:0000955;7.68e-08;68!UBERON:0000922;4.06e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.95e-16,81;UBERON:0002619,1.36e-15,22;UBERON:0001016,1.88e-14,89;UBERON:0000956,8.48e-14,25;UBERON:0000203,8.48e-14,25;UBERON:0002021,2.25e-12,5;UBERON:0001950,3.02e-11,20;UBERON:0002791,7.17e-11,32;UBERON:0001869,7.17e-11,32;UBERON:0003528,3.01e-10,34;UBERON:0002020,3.01e-10,34;UBERON:0001893,3.01e-10,34;UBERON:0000955,1.77e-09,68;UBERON:0006238,1.77e-09,68;UBERON:0000073,3.02e-09,53;UBERON:0002616,3.02e-09,53;UBERON:0001049,9.61e-09,56;UBERON:0005068,9.61e-09,56;UBERON:0006241,9.61e-09,56;UBERON:0007135,9.61e-09,56;UBERON:0004121,1.01e-08,171;UBERON:0000924,1.01e-08,171;UBERON:0006601,1.01e-08,171;UBERON:0002780,1.56e-08,41;UBERON:0001890,1.56e-08,41;UBERON:0003080,1.56e-08,41;UBERON:0006240,1.56e-08,41;UBERON:0001954,1.86e-08,2;UBERON:0003022,1.86e-08,2;UBERON:0002421,1.86e-08,2;UBERON:0002600,1.86e-08,2 | |||
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| ||
|short_description=p9@BHLHE22 | |||
}} | }} |
Latest revision as of 19:22, 18 September 2015
Short description: | p9@BHLHE22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_BHLHE22_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -199bp_to_NM_152414_5end |
EntrezGene: | BHLHE22 |
HGNC: | 11963 |
UniProt: | B4DF88Q8NFJ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.20e-16 | 8 |
neuron | 1.99e-10 | 6 |
neuroblast | 1.99e-10 | 6 |
electrically signaling cell | 1.99e-10 | 6 |
neural cell | 1.03e-08 | 25 |
Merkel cell | 2.15e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.95e-16 | 81 |
regional part of cerebral cortex | 1.36e-15 | 22 |
nervous system | 1.88e-14 | 89 |
cerebral cortex | 8.48e-14 | 25 |
pallium | 8.48e-14 | 25 |
occipital lobe | 2.25e-12 | 5 |
neocortex | 3.02e-11 | 20 |
regional part of telencephalon | 7.17e-11 | 32 |
cerebral hemisphere | 7.17e-11 | 32 |
brain grey matter | 3.01e-10 | 34 |
gray matter | 3.01e-10 | 34 |
telencephalon | 3.01e-10 | 34 |
brain | 1.77e-09 | 68 |
future brain | 1.77e-09 | 68 |
regional part of nervous system | 3.02e-09 | 53 |
regional part of brain | 3.02e-09 | 53 |
neural tube | 9.61e-09 | 56 |
neural rod | 9.61e-09 | 56 |
future spinal cord | 9.61e-09 | 56 |
neural keel | 9.61e-09 | 56 |
ectoderm-derived structure | 1.01e-08 | 171 |
ectoderm | 1.01e-08 | 171 |
presumptive ectoderm | 1.01e-08 | 171 |
regional part of forebrain | 1.56e-08 | 41 |
forebrain | 1.56e-08 | 41 |
anterior neural tube | 1.56e-08 | 41 |
future forebrain | 1.56e-08 | 41 |
Ammon's horn | 1.86e-08 | 2 |
lobe parts of cerebral cortex | 1.86e-08 | 2 |
hippocampal formation | 1.86e-08 | 2 |
limbic lobe | 1.86e-08 | 2 |