FFCP PHASE2:Hg19::chr12:5152939..5152954,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:3741 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:6224 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=3741 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=6224 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P22460 | ||
|association_with_transcript=-130bp_to_ENST00000252321,NM_002234,uc001qni.2_5end | |association_with_transcript=-130bp_to_ENST00000252321,NM_002234,uc001qni.2_5end | ||
|cluster_id=chr12:5152939..5152954,+ | |cluster_id=chr12:5152939..5152954,+ | ||
Latest revision as of 19:32, 18 September 2015
| Short description: | p5@KCNA5 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_5_at_KCNA5_5end |
| Coexpression cluster: | C114_teratocarcinoma_medulloblastoma_carcinosarcoma_iPS_anaplastic_acute_neuroblastoma |
| Association with transcript: | -130bp_to_ENST00000252321, NM_002234, uc001qni.2_5end |
| EntrezGene: | KCNA5 |
| HGNC: | 6224 |
| UniProt: | P22460 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p5@KCNA5 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| caudate-putamen | 1.91e-44 | 3 |
| dorsal striatum | 1.91e-44 | 3 |
| putamen | 3.61e-34 | 1 |
| corpus striatum | 1.17e-33 | 4 |
| striatum | 1.17e-33 | 4 |
| ventral part of telencephalon | 1.17e-33 | 4 |
| future corpus striatum | 1.17e-33 | 4 |
| telencephalic nucleus | 9.49e-20 | 7 |
| pituitary gland | 9.07e-18 | 2 |
| caudate nucleus | 1.27e-17 | 2 |
Showing 1 to 10 of 40 entries
