FFCP PHASE1:Hg19::chr6:42531672..42531679,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23304 | |EntrezGene=23304 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21289 | |HGNC=21289 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IWV8,B3KXG6 | |UniProt=Q8IWV8,B3KXG6 | ||
|association_with_transcript=-80bp_to_NM_001184801,NM_015255_5end | |association_with_transcript=-80bp_to_NM_001184801,NM_015255_5end | ||
|cluster_id=chr6:42531672..42531679,+ | |||
|description=CAGE_peak_8_at_UBR2_5end | |description=CAGE_peak_8_at_UBR2_5end | ||
|id=chr6:42531672..42531679,+ | |id=chr6:42531672..42531679,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000771;3.30e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,2.93e-07,2;CL:0000081,9.26e-07,11 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.99e-17!115;UBERON:0000178!4.53e-08!15;UBERON:0000179!4.53e-08!15;UBERON:0000463!4.53e-08!15;UBERON:0001049!6.36e-07!57;UBERON:0005068!6.36e-07!57;UBERON:0006241!6.36e-07!57;UBERON:0007135!6.36e-07!57;UBERON:0001893!8.73e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.27e-14;15!UBERON:0000179;1.27e-14;15!UBERON:0000463;1.27e-14;15!UBERON:0002390;8.93e-08;32!UBERON:0000125;3.38e-07;9!UBERON:0002308;3.38e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.27e-20,114;UBERON:0000178,6.30e-15,15;UBERON:0000179,6.30e-15,15;UBERON:0000463,6.30e-15,15;UBERON:0001893,2.53e-08,34;UBERON:0001049,4.30e-08,56;UBERON:0005068,4.30e-08,56;UBERON:0006241,4.30e-08,56;UBERON:0007135,4.30e-08,56;UBERON:0002780,9.92e-08,41;UBERON:0001890,9.92e-08,41;UBERON:0003080,9.92e-08,41;UBERON:0006240,9.92e-08,41;UBERON:0000073,1.78e-07,53;UBERON:0002616,1.78e-07,53;UBERON:0000125,2.24e-07,9;UBERON:0002308,2.24e-07,9;UBERON:0002346,2.86e-07,86;UBERON:0003528,5.80e-07,34;UBERON:0002020,5.80e-07,34;UBERON:0003075,7.58e-07,82;UBERON:0007284,7.58e-07,82 | |||
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|phase1_expression=0.54503513781167,0.428201047781966,0.140954404095971,2.00146596706261,0.893922188854576,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0.37129905888014,0,0,0,0.730310090387373,0,0.123121058076788,0,0,0,0.136874425072884,0.251085279189606,0.152826811495903,0.164201178899891,0.157421562627358,0,0.383829398097213,0,0,0,0,0,0.284338464974843,0.293600439334847,0.553995408531877,0.200544447470142,0,0.223915474239924,0.32389366601898,0,0.726991193897824,0,0.727752183563449,0.464858073811369,0.411167888021826,0,0,0,0,0.344745680736619,0,1.35426486594342,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0.622822248995575,0.502497330513487,0,0.434377689410233,0,0,0.316462387440884,0.211255286311942,0,0.209658645508376,0.22465726229299,0.600707571366025,0,0.570025487482497,0,0.182664153764634,0,0,0,0.426730222566507,0,0.574752439954483,0.661044872784862,0.954053754535364,0,0.587237189370939,0.382273228125229,0,0,0,0.786839080455332,0.786021525498329,0.205601498999509,0.334372990781356,0,0,1.94826728407911,0.445641827540694,0.294605907474837,0.664601683750863,0.270803863765016,0,0,0.164437904603676,0.552700035571697,0.869409257205157,0.296573126324121,0.802622484269139,0,0.566546713487831,0.383220493601921,0.34362744548263,1.51811815211702,0.318565414324097,1.30216690771284,0,0.301150238155546,0.383959833463255,1.24930726552346,0.236777252044017,0,0.80642697289893,0.534880391567015,0.289648807765598,0,1.34140171940727,0.255725123687061,0,0.50133791063589,0.289693037921647,0,0,0.283604451492204,0.443458794925128,0.43917392846563,0.982343066232845,0,0.370784442784429,0.649094787309367,0.348259474598534,0.26591592103773,2.38490624305342,0,0.74291500265913,0.596287222100115,0,0.694281003215189,0,0.419499436209906,0,0,0.258416759169329,0,0.33472061276467,0,0,0,0.367663080345869,0.81014194788176,0.17859945656816,0,0.225222960966644,0,0,0.183201743930407,2.63560834872127,3.87780264148325,0,0.496971951695318,0,1.58891016975863,1.14734648299525,0.354668382198357,0,1.06748995729705,0,0.311211035399766,0.134710672069688,0.326923806226917,0.302714855289863,0,0,0.312160076830321,0,0.298897361103602,0.117434498643765,0.323745888736263,0.421352420106746,0.204154171254893,0.368502951935304,0.206651562351531,1.18800285728205,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0.300476117813194,0.340296549480063,0.717558542755448,0.427114777637135,1.05965950579781,1.50045548042201,0,0.257640540045629,0.744467425326359,0.337552664482532,0.194874010322397,1.51460264546469,0.828449087780694,0.161646056818812,0.710019185033229,0.10075209822764,0.508681776931463,0.57978255948989,0.545492241181669,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0.354920400119532,0.168584690078102,0.482022059766964,0.220587945464788,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0.590789906681404,0,0.122988438543114,0,0.109750285408626,0,0.201057944823262,0.0925884451585296,0,0,0,0.115930404975077,0.234817388471643,0.433099343283221,0,0.190254152234598,0.790204397959275,0,0.492434012174795,0.468008530278475,0.148631162288728,0,0.16798212819886,0.708875486211932,0.447792613514241,0,0,0,0.44024217006613,0.414656231081544,0.288239906833923,0.6312121671319,0.126995788584338,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0.8800594298514,0.775630294546667,0,0,0.26593811658487,0,0.257207374262142,0,0,0.142977993658148,0,0,0.325736184293735,0,0.791951872933429,0.301439377059586,0.871533458600294,0.299918973546171,1.2162378064119,0,0,0.958499421966331,0,0,0.144781306667579,0.410952645100767,0.179060963239896,0.224170287987055,0.197030760201927,0.431255149719035,0.641715181398742,0.508189248444927,1.30139853857622,0,0.167516265334349,0,4.49404214368309,0,4.55857064779639,0.24538298343828,0,0,0,0.178428988797162,0.473107245101804,0.35142424497814,0,0,0,0,0,0.260650843404249,0.195801157462741,0.686286847621712,0.206768026122887,0.431428401637234,0.74709290462411,0.303127571446259,0,0,0.496215615637554,0.61384789315225,0.280660094433074,0.384417447767103,0,0,0,0.154209693802656,0.355123450626254,0.164254312027618,0,0,0.120859449591622,0.40101294060657,0.368323955743585,0.68888668898764,0.546273504020151,0.393373244878272,0.451199612907412,0.308061348417659,0,0,0.211103257785751,0,0,0,0,0.270946437543853,0,0.254876273045038,0.831076008928724,0,1.09629938322967,0.784306353074702,0,0.328014645699706,0,1.03041011647722,0.0915694648183434,0.330037999682352,0,0,0,0.290012154876366,0.308097234229289,0.15350367472613,0.137836572484531,0.429680979473094,0,0.340906509664404,0.445160178233687,0.495854746082934,0.192190067365106,0.765676274967505,0.2023155617111,0.464845549297286,1.25924938732256,0,0,0,0,0.18532421910392,0.286249773483982,0.372158369359667,0.632758849437452,0.571890581771475,0,0,0.636406495851874,0,0.539617372749944,0.274537029736055,0.117812402345686,0,0,0,0.975267478179181,0,0,0.136499911407986,0.282810863907425,0,0,0,0.876901770507525,0.578775534266688,0.655894752046633,0,0.30982349809975,0,0.430234056612155,0.589494246078727,0.35667105148125,0.709522128141196,0.42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| ||
|short_description=p8@UBR2 | |short_description=p8@UBR2 | ||
}} | }} |
Latest revision as of 20:13, 18 September 2015
Short description: | p8@UBR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_UBR2_5end |
Coexpression cluster: | NA |
Association with transcript: | -80bp_to_NM_001184801, NM_015255_5end |
EntrezGene: | UBR2 |
HGNC: | 21289 |
UniProt: | Q8IWV8B3KXG6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 2.93e-07 | 2 |
blood cell | 9.26e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.27e-20 | 114 |
blood | 6.30e-15 | 15 |
haemolymphatic fluid | 6.30e-15 | 15 |
organism substance | 6.30e-15 | 15 |
telencephalon | 2.53e-08 | 34 |
neural tube | 4.30e-08 | 56 |
neural rod | 4.30e-08 | 56 |
future spinal cord | 4.30e-08 | 56 |
neural keel | 4.30e-08 | 56 |
regional part of forebrain | 9.92e-08 | 41 |
forebrain | 9.92e-08 | 41 |
anterior neural tube | 9.92e-08 | 41 |
future forebrain | 9.92e-08 | 41 |
regional part of nervous system | 1.78e-07 | 53 |
regional part of brain | 1.78e-07 | 53 |
neural nucleus | 2.24e-07 | 9 |
nucleus of brain | 2.24e-07 | 9 |
neurectoderm | 2.86e-07 | 86 |
brain grey matter | 5.80e-07 | 34 |
gray matter | 5.80e-07 | 34 |
neural plate | 7.58e-07 | 82 |
presumptive neural plate | 7.58e-07 | 82 |