FFCP PHASE1:Hg19::chr5:7851282..7851297,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4552 | |EntrezGene=4552 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7473 | |HGNC=7473 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-1bp_to_ENST00000507837_5end | |association_with_transcript=-1bp_to_ENST00000507837_5end | ||
|cluster_id=chr5:7851282..7851297,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_11_at_MTRR_5end | |description=CAGE_peak_11_at_MTRR_5end | ||
|id=chr5:7851282..7851297,+ | |id=chr5:7851282..7851297,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.17e-17;2!UBERON:0009117;2.66e-14;10!UBERON:0005564;2.66e-14;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.46e-24!115;UBERON:0001049!6.63e-18!57;UBERON:0005068!6.63e-18!57;UBERON:0006241!6.63e-18!57;UBERON:0007135!6.63e-18!57;UBERON:0002616!3.35e-17!59;UBERON:0001896!3.68e-17!3;UBERON:0005290!3.68e-17!3;UBERON:0010096!3.68e-17!3;UBERON:0002298!6.47e-17!8;UBERON:0000955!4.81e-14!69;UBERON:0006238!4.81e-14!69;UBERON:0001017!3.63e-13!82;UBERON:0003127!1.29e-12!2;UBERON:0003075!1.35e-12!86;UBERON:0007284!1.35e-12!86;UBERON:0001873!1.91e-12!2;UBERON:0010122!1.91e-12!2;UBERON:0005743!2.05e-12!86;UBERON:0001954!4.95e-12!2;UBERON:0003022!4.95e-12!2;UBERON:0002421!4.95e-12!2;UBERON:0002600!4.95e-12!2;UBERON:0002346!6.81e-12!90;UBERON:0002148!9.06e-12!2;UBERON:0009662!9.06e-12!2;UBERON:0004733!3.31e-11!12;UBERON:0002028!3.31e-11!12;UBERON:0007277!3.31e-11!12;UBERON:0002020!3.45e-11!34;UBERON:0003528!3.45e-11!34;UBERON:0002780!3.48e-11!41;UBERON:0001890!3.48e-11!41;UBERON:0006240!3.48e-11!41;UBERON:0001893!4.08e-11!34;UBERON:0000073!5.98e-11!94;UBERON:0001016!5.98e-11!94;UBERON:0003080!6.97e-11!42;UBERON:0004732!2.51e-10!13;UBERON:0002308!4.68e-10!9;UBERON:0000125!4.68e-10!9;UBERON:0001869!2.08e-09!32;UBERON:0002791!3.66e-09!33;UBERON:0003076!6.46e-09!15;UBERON:0003057!6.46e-09!15;UBERON:0005383!1.41e-08!3;UBERON:0005382!1.41e-08!3;UBERON:0000153!2.51e-08!129;UBERON:0007811!2.51e-08!129;UBERON:0000988!3.94e-08!3;UBERON:0006331!3.94e-08!3;UBERON:0000033!1.01e-07!123;UBERON:0003056!5.20e-07!61;UBERON:0001301!6.24e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;7.67e-18;2!UBERON:0001873;1.17e-17;2!UBERON:0000473;1.33e-17;8!UBERON:0003135;4.25e-13;11!UBERON:0001896;3.06e-12;3!UBERON:0005383;3.06e-12;3!UBERON:0005290;3.06e-12;3!UBERON:0005382;3.06e-12;3!UBERON:0000369;1.63e-09;4!UBERON:0002435;1.63e-09;4!UBERON:0000204;1.63e-09;4!UBERON:0000991;2.52e-07;21!UBERON:0003101;4.94e-07;22!UBERON:0000079;4.94e-07;22!UBERON:0002298;9.23e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,9.07e-18,2;UBERON:0001873,1.07e-17,2;UBERON:0010122,1.07e-17,2;UBERON:0000473,1.22e-17,8;UBERON:0003135,4.00e-13,11;UBERON:0005383,2.89e-12,3;UBERON:0005382,2.89e-12,3;UBERON:0001896,3.24e-12,3;UBERON:0005290,3.24e-12,3;UBERON:0010096,3.24e-12,3;UBERON:0000369,1.57e-09,4;UBERON:0002435,1.57e-09,4;UBERON:0000204,1.57e-09,4;UBERON:0010082,1.57e-09,4;UBERON:0007023,1.12e-07,114;UBERON:0000991,2.44e-07,21;UBERON:0009196,2.44e-07,21;UBERON:0009117,2.44e-07,21;UBERON:0005564,2.44e-07,21;UBERON:0004176,4.79e-07,22;UBERON:0003101,4.79e-07,22;UBERON:0000079,4.79e-07,22;UBERON:0002298,9.49e-07,6 | |||
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|short_description=p11@MTRR | |short_description=p11@MTRR | ||
}} | }} |
Latest revision as of 21:12, 18 September 2015
Short description: | p11@MTRR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_MTRR_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -1bp_to_ENST00000507837_5end |
EntrezGene: | MTRR |
HGNC: | 7473 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 9.07e-18 | 2 |
caudate nucleus | 1.07e-17 | 2 |
future caudate nucleus | 1.07e-17 | 2 |
testis | 1.22e-17 | 8 |
male reproductive organ | 4.00e-13 | 11 |
caudate-putamen | 2.89e-12 | 3 |
dorsal striatum | 2.89e-12 | 3 |
medulla oblongata | 3.24e-12 | 3 |
myelencephalon | 3.24e-12 | 3 |
future myelencephalon | 3.24e-12 | 3 |
corpus striatum | 1.57e-09 | 4 |
striatum | 1.57e-09 | 4 |
ventral part of telencephalon | 1.57e-09 | 4 |
future corpus striatum | 1.57e-09 | 4 |
adult organism | 1.12e-07 | 114 |
gonad | 2.44e-07 | 21 |
indifferent external genitalia | 2.44e-07 | 21 |
indifferent gonad | 2.44e-07 | 21 |
gonad primordium | 2.44e-07 | 21 |
external genitalia | 4.79e-07 | 22 |
male organism | 4.79e-07 | 22 |
male reproductive system | 4.79e-07 | 22 |
brainstem | 9.49e-07 | 6 |