FFCP PHASE1:Hg19::chr1:6453886..6453903,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
| (4 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11332 | |EntrezGene=11332 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24157 | |HGNC=24157 | ||
|TSSclassifier=strong | |||
|UniProt=O00154 | |UniProt=O00154 | ||
|association_with_transcript=-60bp_to_NM_007274,uc001amt.2,uc001amu.2,uc001amv.2_5end | |association_with_transcript=-60bp_to_NM_007274,uc001amt.2,uc001amu.2,uc001amv.2_5end | ||
|cluster_id=chr1:6453886..6453903,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_11_at_ACOT7_5end | |description=CAGE_peak_11_at_ACOT7_5end | ||
Latest revision as of 21:35, 18 September 2015
| Short description: | p11@ACOT7 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_11_at_ACOT7_5end |
| Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
| Association with transcript: | -60bp_to_NM_007274, uc001amt.2, uc001amu.2, uc001amv.2_5end |
| EntrezGene: | ACOT7 |
| HGNC: | 24157 |
| UniProt: | O00154 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p11@ACOT7 |
|---|
0
1
2
3
4
5
6
7
8
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| crystallin accumulating cell | 2.35e-13 | 4 |
| vertebrate lens cell | 2.35e-13 | 4 |
| lens epithelial cell | 2.35e-13 | 4 |
| endothelial cell of sinusoid | 1.64e-07 | 2 |
| endothelial cell of hepatic sinusoid | 1.64e-07 | 2 |
Showing 1 to 5 of 5 entries
| Ontology term | p-value | n |
|---|---|---|
| cuboidal epithelium | 2.35e-13 | 4 |
| transparent eye structure | 2.35e-13 | 4 |
| simple cuboidal epithelium | 2.35e-13 | 4 |
| cranial placode | 2.35e-13 | 4 |
| lens of camera-type eye | 2.35e-13 | 4 |
| epithelium of lens | 2.35e-13 | 4 |
| lens placode | 2.35e-13 | 4 |
| lens vesicle | 2.35e-13 | 4 |
| dorsal plus ventral thalamus | 1.20e-07 | 2 |
| thalamic complex | 1.20e-07 | 2 |
Showing 1 to 10 of 16 entries
