FFCP PHASE1:Hg19::chr4:81951957..81951988,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:81951957..81951988,+
|short_description=p2@BMP3
|description=CAGE_peak_2_at_BMP3_5end
|association_with_transcript=-130bp_to_ENST00000282701,NM_001201,uc00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=651 | |EntrezGene=651 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1070 | |HGNC=1070 | ||
|TSSclassifier=strong | |||
|UniProt=P12645 | |UniProt=P12645 | ||
|association_with_transcript=-130bp_to_ENST00000282701,NM_001201,uc003hmg.3_5end | |||
|cluster_id=chr4:81951957..81951988,+ | |||
|description=CAGE_peak_2_at_BMP3_5end | |||
|id=chr4:81951957..81951988,+ | |||
|ontology_enrichment_celltype=CL:0000945!2.04e-07!24;CL:0000826!2.04e-07!24 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.31e-31!115;UBERON:0001049!7.30e-13!57;UBERON:0005068!7.30e-13!57;UBERON:0006241!7.30e-13!57;UBERON:0007135!7.30e-13!57;UBERON:0002619!2.40e-11!22;UBERON:0001950!4.27e-11!20;UBERON:0003075!6.84e-11!86;UBERON:0007284!6.84e-11!86;UBERON:0003080!3.59e-10!42;UBERON:0002346!4.93e-10!90;UBERON:0000956!1.32e-09!25;UBERON:0000203!1.32e-09!25;UBERON:0002780!3.30e-09!41;UBERON:0001890!3.30e-09!41;UBERON:0006240!3.30e-09!41;UBERON:0002616!5.35e-09!59;UBERON:0005743!6.28e-09!86;UBERON:0003056!7.39e-09!61;UBERON:0001017!7.73e-09!82;UBERON:0001871!8.73e-09!7;UBERON:0002020!2.91e-08!34;UBERON:0003528!2.91e-08!34;UBERON:0001893!3.36e-08!34;UBERON:0000073!4.93e-08!94;UBERON:0001016!4.93e-08!94;UBERON:0001869!7.06e-08!32;UBERON:0000153!1.56e-07!129;UBERON:0007811!1.56e-07!129;UBERON:0002791!1.82e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;4.59e-18;17!UBERON:0005409;4.46e-17;22!UBERON:0004921;4.85e-17;33!UBERON:0002108;8.84e-14;4!UBERON:0000922;2.99e-13;49!UBERON:0000059;5.39e-10;11!UBERON:0000341;4.91e-09;2!UBERON:0001555;3.83e-08;54!UBERON:0001155;4.00e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.65e-18,17;UBERON:0005409,7.00e-15,25;UBERON:0002108,1.05e-13,4;UBERON:0004921,5.00e-12,118;UBERON:0000059,4.96e-10,11;UBERON:0001007,6.98e-10,145;UBERON:0001555,6.98e-10,145;UBERON:0007026,6.98e-10,145;UBERON:0000341,4.53e-09,2;UBERON:0004119,1.75e-08,160;UBERON:0000925,1.75e-08,160;UBERON:0006595,1.75e-08,160;UBERON:0001155,3.68e-08,9;UBERON:0001046,2.28e-07,19;UBERON:0011216,2.58e-07,223;UBERON:0007023,8.97e-07,114 | |||
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| ||
|short_description=p2@BMP3 | |||
}} | }} |
Latest revision as of 22:38, 18 September 2015
Short description: | p2@BMP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BMP3_5end |
Coexpression cluster: | NA |
Association with transcript: | -130bp_to_ENST00000282701, NM_001201, uc003hmg.3_5end |
EntrezGene: | BMP3 |
HGNC: | 1070 |
UniProt: | P12645 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 4.65e-18 | 17 |
gastrointestinal system | 7.00e-15 | 25 |
small intestine | 1.05e-13 | 4 |
subdivision of digestive tract | 5.00e-12 | 118 |
large intestine | 4.96e-10 | 11 |
digestive system | 6.98e-10 | 145 |
digestive tract | 6.98e-10 | 145 |
primitive gut | 6.98e-10 | 145 |
throat | 4.53e-09 | 2 |
endoderm-derived structure | 1.75e-08 | 160 |
endoderm | 1.75e-08 | 160 |
presumptive endoderm | 1.75e-08 | 160 |
colon | 3.68e-08 | 9 |
hindgut | 2.28e-07 | 19 |
organ system subdivision | 2.58e-07 | 223 |
adult organism | 8.97e-07 | 114 |