FFCP PHASE1:Hg19::chr8:68864598..68864664,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80243 | |EntrezGene=80243 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22950 | |HGNC=22950 | ||
|TSSclassifier=strong | |||
|UniProt=Q70Z35 | |UniProt=Q70Z35 | ||
|association_with_transcript=0bp_to_ENST00000529398,NM_024870,NM_025170,uc003xxu.1,uc003xxv.1,uc011lez.1_5end | |association_with_transcript=0bp_to_ENST00000529398,NM_024870,NM_025170,uc003xxu.1,uc003xxv.1,uc011lez.1_5end | ||
|cluster_id=chr8:68864598..68864664,+ | |||
|coexpression_cluster_id=C1544 | |coexpression_cluster_id=C1544 | ||
|description=CAGE_peak_1_at_PREX2_5end | |description=CAGE_peak_1_at_PREX2_5end | ||
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|ontology_enrichment_celltype=CL:0002139!7.23e-13!24;CL:0000071!4.32e-10!18;CL:0002546!4.32e-10!18;CL:0000115!6.77e-08!35 | |ontology_enrichment_celltype=CL:0002139!7.23e-13!24;CL:0000071!4.32e-10!18;CL:0002546!4.32e-10!18;CL:0000115!6.77e-08!35 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.29e-14;24!CL:0000071;2.60e-12;18!CL:0000115;1.37e-08;36 | |ontology_enrichment_celltype_v019=CL:0002139;1.29e-14;24!CL:0000071;2.60e-12;18!CL:0000115;1.37e-08;36 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.02e-14,24;CL:0000071,1.91e-12,18;CL:0002546,1.91e-12,18;CL:0000115,3.08e-10,36;CL:0000047,5.82e-08,8;CL:0002078,7.42e-07,45 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.46e-13;82!CL:0002546;2.60e-12;18 | |ontology_enrichment_development_v019=UBERON:0006601;6.46e-13;82!CL:0002546;2.60e-12;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.70e-56!115;UBERON:0001049!5.08e-44!57;UBERON:0005068!5.08e-44!57;UBERON:0006241!5.08e-44!57;UBERON:0007135!5.08e-44!57;UBERON:0001017!1.42e-42!82;UBERON:0005743!1.48e-40!86;UBERON:0000073!4.98e-37!94;UBERON:0001016!4.98e-37!94;UBERON:0002616!9.76e-36!59;UBERON:0003080!5.24e-34!42;UBERON:0002780!1.29e-33!41;UBERON:0001890!1.29e-33!41;UBERON:0006240!1.29e-33!41;UBERON:0000955!4.26e-33!69;UBERON:0006238!4.26e-33!69;UBERON:0003075!1.63e-32!86;UBERON:0007284!1.63e-32!86;UBERON:0002346!8.51e-30!90;UBERON:0002020!3.57e-28!34;UBERON:0003528!3.57e-28!34;UBERON:0001893!4.86e-28!34;UBERON:0002791!3.60e-27!33;UBERON:0001869!3.57e-26!32;UBERON:0003056!2.89e-22!61;UBERON:0000956!6.06e-20!25;UBERON:0000203!6.06e-20!25;UBERON:0002619!2.50e-18!22;UBERON:0000153!8.40e-18!129;UBERON:0007811!8.40e-18!129;UBERON:0000025!2.88e-17!194;UBERON:0000033!3.23e-17!123;UBERON:0004121!3.37e-17!169;UBERON:0004111!1.54e-16!241;UBERON:0001950!1.68e-16!20;UBERON:0000924!4.21e-16!173;UBERON:0006601!4.21e-16!173;UBERON:0000477!1.47e-13!286;UBERON:0000468!4.28e-11!659;UBERON:0003076!6.40e-11!15;UBERON:0003057!6.40e-11!15;UBERON:0001986!4.32e-10!18;UBERON:0004638!4.32e-10!18;UBERON:0004852!4.32e-10!18;UBERON:0000467!8.11e-10!625;UBERON:0002308!1.01e-09!9;UBERON:0000125!1.01e-09!9;UBERON:0000480!1.06e-09!626;UBERON:0002420!1.66e-09!9;UBERON:0007245!1.66e-09!9;UBERON:0010009!1.66e-09!9;UBERON:0010011!1.66e-09!9;UBERON:0000454!1.66e-09!9;UBERON:0004732!2.20e-09!13;UBERON:0004733!1.80e-08!12;UBERON:0002028!1.80e-08!12;UBERON:0007277!1.80e-08!12;UBERON:0002298!1.85e-08!8;UBERON:0000483!2.88e-08!309;UBERON:0000119!6.84e-08!312;UBERON:0009663!7.87e-08!7;UBERON:0000062!1.03e-07!511;UBERON:0000922!1.12e-07!612;UBERON:0000487!3.41e-07!22;UBERON:0000064!4.25e-07!219;UBERON:0001894!6.15e-07!7;UBERON:0006222!6.15e-07!7;UBERON:0001871!6.60e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!2.70e-56!115;UBERON:0001049!5.08e-44!57;UBERON:0005068!5.08e-44!57;UBERON:0006241!5.08e-44!57;UBERON:0007135!5.08e-44!57;UBERON:0001017!1.42e-42!82;UBERON:0005743!1.48e-40!86;UBERON:0000073!4.98e-37!94;UBERON:0001016!4.98e-37!94;UBERON:0002616!9.76e-36!59;UBERON:0003080!5.24e-34!42;UBERON:0002780!1.29e-33!41;UBERON:0001890!1.29e-33!41;UBERON:0006240!1.29e-33!41;UBERON:0000955!4.26e-33!69;UBERON:0006238!4.26e-33!69;UBERON:0003075!1.63e-32!86;UBERON:0007284!1.63e-32!86;UBERON:0002346!8.51e-30!90;UBERON:0002020!3.57e-28!34;UBERON:0003528!3.57e-28!34;UBERON:0001893!4.86e-28!34;UBERON:0002791!3.60e-27!33;UBERON:0001869!3.57e-26!32;UBERON:0003056!2.89e-22!61;UBERON:0000956!6.06e-20!25;UBERON:0000203!6.06e-20!25;UBERON:0002619!2.50e-18!22;UBERON:0000153!8.40e-18!129;UBERON:0007811!8.40e-18!129;UBERON:0000025!2.88e-17!194;UBERON:0000033!3.23e-17!123;UBERON:0004121!3.37e-17!169;UBERON:0004111!1.54e-16!241;UBERON:0001950!1.68e-16!20;UBERON:0000924!4.21e-16!173;UBERON:0006601!4.21e-16!173;UBERON:0000477!1.47e-13!286;UBERON:0000468!4.28e-11!659;UBERON:0003076!6.40e-11!15;UBERON:0003057!6.40e-11!15;UBERON:0001986!4.32e-10!18;UBERON:0004638!4.32e-10!18;UBERON:0004852!4.32e-10!18;UBERON:0000467!8.11e-10!625;UBERON:0002308!1.01e-09!9;UBERON:0000125!1.01e-09!9;UBERON:0000480!1.06e-09!626;UBERON:0002420!1.66e-09!9;UBERON:0007245!1.66e-09!9;UBERON:0010009!1.66e-09!9;UBERON:0010011!1.66e-09!9;UBERON:0000454!1.66e-09!9;UBERON:0004732!2.20e-09!13;UBERON:0004733!1.80e-08!12;UBERON:0002028!1.80e-08!12;UBERON:0007277!1.80e-08!12;UBERON:0002298!1.85e-08!8;UBERON:0000483!2.88e-08!309;UBERON:0000119!6.84e-08!312;UBERON:0009663!7.87e-08!7;UBERON:0000062!1.03e-07!511;UBERON:0000922!1.12e-07!612;UBERON:0000487!3.41e-07!22;UBERON:0000064!4.25e-07!219;UBERON:0001894!6.15e-07!7;UBERON:0006222!6.15e-07!7;UBERON:0001871!6.60e-07!7 | ||
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| ||
|short_description=p1@PREX2 | |short_description=p1@PREX2 | ||
}} | }} |
Latest revision as of 22:42, 18 September 2015
Short description: | p1@PREX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PREX2_5end |
Coexpression cluster: | C1544_caudate_globus_optic_locus_spinal_hippocampus_thalamus |
Association with transcript: | 0bp_to_ENST00000529398, NM_024870, NM_025170, uc003xxu.1, uc003xxv.1, uc011lez.1_5end |
EntrezGene: | PREX2 |
HGNC: | 22950 |
UniProt: | Q70Z35 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.02e-14 | 24 |
blood vessel endothelial cell | 1.91e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.91e-12 | 18 |
endothelial cell | 3.08e-10 | 36 |
neuronal stem cell | 5.82e-08 | 8 |
meso-epithelial cell | 7.42e-07 | 45 |