FFCP PHASE1:Hg19::chr3:5229233..5229249,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9695 | |EntrezGene=9695 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18967 | |HGNC=18967 | ||
|TSSclassifier=strong | |||
|UniProt=B4DPV5,F8WER9 | |UniProt=B4DPV5,F8WER9 | ||
|association_with_transcript=-81bp_to_ENST00000419550,ENST00000434243,uc011asz.1_5end | |association_with_transcript=-81bp_to_ENST00000419550,ENST00000434243,uc011asz.1_5end | ||
|cluster_id=chr3:5229233..5229249,+ | |||
|coexpression_cluster_id=C28 | |coexpression_cluster_id=C28 | ||
|description=CAGE_peak_8_at_EDEM1_5end | |description=CAGE_peak_8_at_EDEM1_5end | ||
|id=chr3:5229233..5229249,+ | |id=chr3:5229233..5229249,+ | ||
|ontology_enrichment_celltype=CL:0002087!2.52e-13!119;CL:0000738!1.13e-12!140;CL:0002031!2.03e-11!124;CL:0000084!6.39e-11!25;CL:0000827!6.39e-11!25;CL:0000037!7.37e-11!172;CL:0000566!7.37e-11!172;CL:0000542!9.36e-10!53;CL:0000051!9.36e-10!53;CL:0000988!1.00e-09!182;CL:0000838!2.09e-09!52;CL:0000791!2.29e-09!18;CL:0000789!2.29e-09!18;CL:0002420!2.29e-09!18;CL:0002419!2.29e-09!18;CL:0000790!2.29e-09!18;CL:0002032!6.90e-09!165;CL:0000837!6.90e-09!165 | |ontology_enrichment_celltype=CL:0002087!2.52e-13!119;CL:0000738!1.13e-12!140;CL:0002031!2.03e-11!124;CL:0000084!6.39e-11!25;CL:0000827!6.39e-11!25;CL:0000037!7.37e-11!172;CL:0000566!7.37e-11!172;CL:0000542!9.36e-10!53;CL:0000051!9.36e-10!53;CL:0000988!1.00e-09!182;CL:0000838!2.09e-09!52;CL:0000791!2.29e-09!18;CL:0000789!2.29e-09!18;CL:0002420!2.29e-09!18;CL:0002419!2.29e-09!18;CL:0000790!2.29e-09!18;CL:0002032!6.90e-09!165;CL:0000837!6.90e-09!165 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.78e-18;25!CL:0000791;4.90e-17;18!CL:0000789;4.90e-17;18!CL:0002419;4.90e-17;18!CL:0000624;1.47e-10;6!CL:0000625;9.00e-10;11!CL:0000542;8.07e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.66e-18,25;CL:0000827,1.66e-18,25;CL:0000791,4.39e-17,18;CL:0000789,4.39e-17,18;CL:0002420,4.39e-17,18;CL:0002419,4.39e-17,18;CL:0000790,4.39e-17,18;CL:0000838,4.44e-15,52;CL:0000542,1.09e-14,53;CL:0000051,1.09e-14,53;CL:0000624,8.61e-11,6;CL:0002087,1.56e-10,115;CL:0002031,8.61e-10,120;CL:0000625,1.18e-09,11;CL:0000738,2.25e-09,136 | |||
|ontology_enrichment_development_v019=CL:0000790;4.90e-17;18!CL:0000051;8.07e-09;53 | |||
|ontology_enrichment_disease=DOID:3095!1.96e-08!22;DOID:2994!1.96e-08!22 | |ontology_enrichment_disease=DOID:3095!1.96e-08!22;DOID:2994!1.96e-08!22 | ||
|ontology_enrichment_disease_v019=DOID:171;4.69e-08;10!DOID:3095;4.54e-07;22!DOID:2994;4.54e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.95e-08,10;DOID:3095,5.28e-07,22;DOID:2994,5.28e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0001869!6.28e-11!32;UBERON:0002619!1.24e-10!22;UBERON:0001893!2.65e-10!34;UBERON:0000073!3.41e-10!94;UBERON:0001016!3.41e-10!94;UBERON:0001017!3.74e-10!82;UBERON:0002780!6.69e-10!41;UBERON:0001890!6.69e-10!41;UBERON:0006240!6.69e-10!41;UBERON:0002020!1.06e-09!34;UBERON:0003528!1.06e-09!34;UBERON:0002791!1.10e-09!33;UBERON:0001950!1.46e-09!20;UBERON:0003080!2.19e-09!42;UBERON:0005743!2.96e-09!86;UBERON:0000956!4.52e-09!25;UBERON:0000203!4.52e-09!25;UBERON:0001049!8.97e-09!57;UBERON:0005068!8.97e-09!57;UBERON:0006241!8.97e-09!57;UBERON:0007135!8.97e-09!57;UBERON:0000955!1.06e-08!69;UBERON:0006238!1.06e-08!69;UBERON:0007023!1.13e-08!115;UBERON:0002616!5.25e-08!59 | |ontology_enrichment_uberon=UBERON:0001869!6.28e-11!32;UBERON:0002619!1.24e-10!22;UBERON:0001893!2.65e-10!34;UBERON:0000073!3.41e-10!94;UBERON:0001016!3.41e-10!94;UBERON:0001017!3.74e-10!82;UBERON:0002780!6.69e-10!41;UBERON:0001890!6.69e-10!41;UBERON:0006240!6.69e-10!41;UBERON:0002020!1.06e-09!34;UBERON:0003528!1.06e-09!34;UBERON:0002791!1.10e-09!33;UBERON:0001950!1.46e-09!20;UBERON:0003080!2.19e-09!42;UBERON:0005743!2.96e-09!86;UBERON:0000956!4.52e-09!25;UBERON:0000203!4.52e-09!25;UBERON:0001049!8.97e-09!57;UBERON:0005068!8.97e-09!57;UBERON:0006241!8.97e-09!57;UBERON:0007135!8.97e-09!57;UBERON:0000955!1.06e-08!69;UBERON:0006238!1.06e-08!69;UBERON:0007023!1.13e-08!115;UBERON:0002616!5.25e-08!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.59e-14;32!UBERON:0001893;6.88e-14;34!UBERON:0002791;2.50e-13;32!UBERON:0003528;2.63e-13;34!UBERON:0002020;2.63e-13;34!UBERON:0002619;1.19e-12;22!UBERON:0001950;7.69e-12;20!UBERON:0000956;7.31e-11;25!UBERON:0000203;7.31e-11;25!UBERON:0002780;2.46e-09;41!UBERON:0001890;2.46e-09;41!UBERON:0001872;5.60e-08;5!UBERON:0000073;6.69e-08;53!UBERON:0002616;6.69e-08;53!UBERON:0000955;5.06e-07;68!UBERON:0002420;6.98e-07;9!UBERON:0007245;6.98e-07;9!UBERON:0010009;6.98e-07;9!UBERON:0010011;6.98e-07;9!UBERON:0000454;6.98e-07;9!UBERON:0002370;9.27e-07;2!UBERON:0005058;9.27e-07;2!UBERON:0009113;9.27e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,2.78e-17,32;UBERON:0001893,4.95e-16,34;UBERON:0002791,4.30e-15,32;UBERON:0003528,5.44e-14,34;UBERON:0002020,5.44e-14,34;UBERON:0002619,1.30e-12,22;UBERON:0002780,1.30e-12,41;UBERON:0001890,1.30e-12,41;UBERON:0003080,1.30e-12,41;UBERON:0006240,1.30e-12,41;UBERON:0001016,5.16e-12,89;UBERON:0001950,6.12e-12,20;UBERON:0000073,1.64e-11,53;UBERON:0002616,1.64e-11,53;UBERON:0000956,7.84e-11,25;UBERON:0000203,7.84e-11,25;UBERON:0001049,1.19e-10,56;UBERON:0005068,1.19e-10,56;UBERON:0006241,1.19e-10,56;UBERON:0007135,1.19e-10,56;UBERON:0001017,1.51e-10,81;UBERON:0000955,4.54e-10,68;UBERON:0006238,4.54e-10,68;UBERON:0007023,1.98e-09,114;UBERON:0001872,6.11e-08,5;UBERON:0002346,7.49e-08,86;UBERON:0003056,3.37e-07,61;UBERON:0002370,5.83e-07,4;UBERON:0005058,5.83e-07,4;UBERON:0009113,5.83e-07,4;UBERON:0003295,5.83e-07,4;UBERON:0005562,5.83e-07,4;UBERON:0000200,6.35e-07,6;UBERON:0002420,9.39e-07,9;UBERON:0007245,9.39e-07,9;UBERON:0010009,9.39e-07,9;UBERON:0010011,9.39e-07,9;UBERON:0000454,9.39e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0.487932798790507,0,0,0.626909442956176,0,0.136874425072884,0,0.152826811495903,0.246301768349837,0,0,0,0.309632246632152,0,0.30120591877825,0,1.70427841276664,0.995184627411951,0.293600439334847,0,0.200544447470142,0.217010870715852,0,0,0.257575567634187,0.436194716338694,0,0.242584061187816,0.697287110717054,1.23350366406548,0.309706370895104,1.1507695692886,1.7931249457037,0.709446689665756,0.689491361473237,1.93645405075148,0,0.376484679085209,0.272906150057846,0.224723484445085,1.22433556948361,0.320929027076094,0,1.9791078011203,0.598390972864896,0.852449501065388,0.290209238628584,0.56738522469114,0,1.25624332628372,1.5644487552606,0,0.605399502633369,0.368277635987565,1.26584954976354,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0.569212969109448,0.587237189370939,0,0,1.12101712596307,0,2.75393678159366,1.57204305099666,1.43921049299656,0,2.60737813306872,1.4203434172042,1.94826728407911,0.222820913770347,0.294605907474837,0.886135578334485,0.541607727530031,0.384273959177026,0.650296737799391,0.164437904603676,0,0,3.26230438956533,3.74557159325598,2.09071047609954,0.226618685395132,2.68254345521345,0.68725489096526,1.26509846009751,0.95569624297229,1.30216690771284,0,1.05402583354441,1.15187950038977,0,0.947109008176067,3.28451198768419,1.81446068902259,1.33720097891754,1.59306844271079,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,1.63723844372141,0,0,0.324547393654683,0,0.132957960518865,0.476981248610684,1.14398982156026,0.371457501329565,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225222960966644,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0.121973706129595,0.265059536642971,0.348581828608555,0.414644220061482,0.756962552626885,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0,3.5317047953172,0.122988438543114,0,0.219500570817251,1.1240175325762,0,0.185176890317059,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0.246217006087397,0,0,0,0.503946384596579,0.141775097242386,0.179117045405697,0,0.383382679165211,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0.336255431980582,1.57624608161542,1.2937654491571,0.898401253958239,0,1.30139853857622,0,1.17261385734044,0.637938751653163,0.749007023947182,0,0,0,0,0.271265023699736,0.207970861530807,0,0,0.234282829985426,0,0,0,0,0,0,0,0,0.620304078368662,0.862856803274467,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0,0,0.116210378459959,0.120859449591622,0,0.276242966807689,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0.223874754722178,0.438519753291869,0.261435451024901,0,0,0,0,0.366277859273374,0.247528499761764,0.574265537996172,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0.267096106940212,0.165284915360978,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0.443430153536676,0.459446800413919,0,0.764637207142375,0,1.19115887728894,0.411362273086194,0,0,0.79312517629427,0.106824071127473,0,0,0.557409525377156,0,1.84968792705877,1.11598390910176,0.199579371432817,0,0,0,0,0.456469358066384,0,0,0.169291777801603,0.321176150207399,0.201799707191048,0.425846237690326,0,0.614481528616916,0.223676107892416,0.333698283423817,0.781552381608161,0,0,0,0,0,0,0,0,0.445773537109913,0.284136146806413,0,0,0,0,1.40669416410513,0.111308705022906,0.16480387422676,0,0.19924798825107,0.552567831062295,0.251932747854276,0,1.6001024709939,0,0,0,0,0.0986434056369336,0,0,3.87733098438087,1.85536196323703,0,0,0.0874599999961957,0,0,0,0.236387681767936,0.344743373241465,0.583209226766509,0.347249989866585,0,2.17073589525734,0,1.54810963903714,2.06883333267483,1.31631238292384,0,0,0.0769502585037971,0,0.46112780877612,0.718061155278177,0.108647371922008,0,0.0915975934018623,1.06606955203727,3.06579894587209,0.470940769185074,0,0,0,0,0.189753732724185,0.158936578980379,0,0,0,0,0,0.0884575645033392,1.22206028986725,0,0.123563938946503,0.417687798021821,0,0,0.702793337176017,1.82454789215666,0.19566461893209,0.242780379534093,0.394584402849391,0,0.91821828489147,0.063186579628488,0.751617097072463,0.103688191397247,0,0,0,0,0,0.277349346026277,0,0,0.0870592065804026,0,0,0.0967563312890851,0,0.0821154570532092,0.193978032976839,0.0882561266915003,0.677942222341597,0,0.19871461170299,1.58276989889697,0,0,0,0,0,0,0.686379991447858,0.14405479798815,0,0,0.271808412147228,0.104602846312333,0.101998217636322,0,1.20084057741958,0,0,0.429765441419957,0,0,0.229160424011684,0,0,0,0,0.53746777989381,0.360299883542404,0,0.157566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| ||
|short_description=p8@EDEM1 | |short_description=p8@EDEM1 | ||
}} | }} |
Latest revision as of 23:07, 18 September 2015
Short description: | p8@EDEM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_EDEM1_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | -81bp_to_ENST00000419550, ENST00000434243, uc011asz.1_5end |
EntrezGene: | EDEM1 |
HGNC: | 18967 |
UniProt: | B4DPV5F8WER9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.66e-18 | 25 |
pro-T cell | 1.66e-18 | 25 |
mature alpha-beta T cell | 4.39e-17 | 18 |
alpha-beta T cell | 4.39e-17 | 18 |
immature T cell | 4.39e-17 | 18 |
mature T cell | 4.39e-17 | 18 |
immature alpha-beta T cell | 4.39e-17 | 18 |
lymphoid lineage restricted progenitor cell | 4.44e-15 | 52 |
lymphocyte | 1.09e-14 | 53 |
common lymphoid progenitor | 1.09e-14 | 53 |
CD4-positive, alpha-beta T cell | 8.61e-11 | 6 |
nongranular leukocyte | 1.56e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 8.61e-10 | 120 |
CD8-positive, alpha-beta T cell | 1.18e-09 | 11 |
leukocyte | 2.25e-09 | 136 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.95e-08 | 10 |
germ cell and embryonal cancer | 5.28e-07 | 22 |
germ cell cancer | 5.28e-07 | 22 |