FFCP PHASE1:Hg19::chr11:63330842..63330859,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54979 | |EntrezGene=54979 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17824 | |HGNC=17824 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NWW9 | |UniProt=Q9NWW9 | ||
|association_with_transcript=0bp_to_ENST00000255695,NM_017878,uc001nxg.1_5end | |association_with_transcript=0bp_to_ENST00000255695,NM_017878,uc001nxg.1_5end | ||
|cluster_id=chr11:63330842..63330859,- | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_1_at_HRASLS2_5end | |description=CAGE_peak_1_at_HRASLS2_5end | ||
|id=chr11:63330842..63330859,- | |id=chr11:63330842..63330859,- | ||
|ontology_enrichment_celltype=CL:0000945!1.35e-19!24;CL:0000826!1.35e-19!24;CL:0000236!1.06e-15!14;CL:0000838!1.16e-08!52;CL:0000542!2.09e-08!53;CL:0000051!2.09e-08!53 | |ontology_enrichment_celltype=CL:0000945!1.35e-19!24;CL:0000826!1.35e-19!24;CL:0000236!1.06e-15!14;CL:0000838!1.16e-08!52;CL:0000542!2.09e-08!53;CL:0000051!2.09e-08!53 | ||
|ontology_enrichment_celltype_v019=CL:0000236;3.22e-20;13!CL:0000945;9.41e-14;24!CL:0002097;1.98e-12;2!CL:0000174;1.43e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.03e-18,14;CL:0000945,1.03e-13,24;CL:0000826,1.03e-13,24;CL:0002097,1.58e-12,2;CL:0000174,1.23e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.04e-17;29 | |||
|ontology_enrichment_disease=DOID:305!5.71e-09!106 | |ontology_enrichment_disease=DOID:305!5.71e-09!106 | ||
|ontology_enrichment_disease_v019=DOID:630;4.77e-07;1!DOID:0050177;4.77e-07;1!DOID:0050427;4.77e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.11e-07,106;DOID:630,6.38e-07,1;DOID:0050177,6.38e-07,1;DOID:0050427,6.38e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.60e-18!9;UBERON:0001557!4.90e-09!19;UBERON:0004921!2.50e-07!129;UBERON:0004185!2.50e-07!129;UBERON:0008947!3.45e-07!38;UBERON:0003258!3.45e-07!38 | |ontology_enrichment_uberon=UBERON:0001737!2.60e-18!9;UBERON:0001557!4.90e-09!19;UBERON:0004921!2.50e-07!129;UBERON:0004185!2.50e-07!129;UBERON:0008947!3.45e-07!38;UBERON:0003258!3.45e-07!38 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;8.77e-48;9!UBERON:0001557;8.77e-48;9!UBERON:0000072;5.89e-12;37!UBERON:0000065;1.00e-09;44!UBERON:0002369;1.43e-08;3!UBERON:0001235;1.43e-08;3!UBERON:0006858;1.43e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.47e-48,9;UBERON:0001557,6.44e-22,19;UBERON:0008947,9.34e-13,38;UBERON:0003258,9.34e-13,38;UBERON:0000072,5.62e-10,47;UBERON:0004921,1.21e-08,118;UBERON:0002369,1.23e-08,3;UBERON:0001235,1.23e-08,3;UBERON:0006858,1.23e-08,3;UBERON:0000065,1.85e-08,54;UBERON:0001007,1.70e-07,145;UBERON:0001555,1.70e-07,145;UBERON:0007026,1.70e-07,145 | |||
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| ||
|short_description=p1@HRASLS2 | |short_description=p1@HRASLS2 | ||
}} | }} |
Latest revision as of 23:12, 18 September 2015
Short description: | p1@HRASLS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HRASLS2_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | 0bp_to_ENST00000255695, NM_017878, uc001nxg.1_5end |
EntrezGene: | HRASLS2 |
HGNC: | 17824 |
UniProt: | Q9NWW9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.03e-18 | 14 |
lymphocyte of B lineage | 1.03e-13 | 24 |
pro-B cell | 1.03e-13 | 24 |
cortical cell of adrenal gland | 1.58e-12 | 2 |
steroid hormone secreting cell | 1.23e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 7.47e-48 | 9 |
upper respiratory tract | 6.44e-22 | 19 |
respiratory primordium | 9.34e-13 | 38 |
endoderm of foregut | 9.34e-13 | 38 |
segment of respiratory tract | 5.62e-10 | 47 |
subdivision of digestive tract | 1.21e-08 | 118 |
adrenal gland | 1.23e-08 | 3 |
adrenal cortex | 1.23e-08 | 3 |
adrenal/interrenal gland | 1.23e-08 | 3 |
respiratory tract | 1.85e-08 | 54 |
digestive system | 1.70e-07 | 145 |
digestive tract | 1.70e-07 | 145 |
primitive gut | 1.70e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.11e-07 | 106 |
genetic disease | 6.38e-07 | 1 |
monogenic disease | 6.38e-07 | 1 |
xeroderma pigmentosum | 6.38e-07 | 1 |