FFCP PHASE1:Hg19::chr10:71078595..71078677,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:71078595..71078677,+ to FFCP PHASE1:Hg19::chr10:71078595..71078677,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3098 | |EntrezGene=3098 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4922 | |HGNC=4922 | ||
|TSSclassifier=strong | |||
|UniProt=P19367,B4DG62,A8K7J7,B3KXY9,Q59FD4 | |UniProt=P19367,B4DG62,A8K7J7,B3KXY9,Q59FD4 | ||
|association_with_transcript=0bp_to_ENST00000359426,ENST00000405407,NM_000188,uc001jpl.3,uc009xqd.2_5end | |||
|cluster_id=chr10:71078595..71078677,+ | |||
|description=CAGE_peak_1_at_HK1_5end | |||
|id=chr10:71078595..71078677,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.61e-15!180;CL:0000359!1.95e-09!32;CL:0002057!3.79e-08!42;CL:0002321!8.98e-08!248;CL:0000680!1.01e-07!57;CL:0000056!1.01e-07!57;CL:0000355!1.01e-07!57;CL:0002371!1.56e-07!591;CL:0000222!1.70e-07!119;CL:0000192!2.11e-07!42;CL:0000514!2.11e-07!42;CL:0000220!2.13e-07!246;CL:0000393!3.01e-07!60;CL:0000211!3.01e-07!60;CL:0002494!6.05e-07!16;CL:0000057!9.82e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000359;7.60e-09;32!CL:0002494;5.69e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.95e-09,32;CL:0000860,3.79e-08,42;CL:0002057,3.79e-08,42;CL:0000473,8.50e-08,48;CL:0000234,8.50e-08,48;CL:0002321,9.26e-08,250;CL:0000222,1.93e-07,121;CL:0000680,2.34e-07,58;CL:0000056,2.34e-07,58;CL:0000355,2.34e-07,58;CL:0000192,5.63e-07,43;CL:0000514,5.63e-07,43;CL:0002494,6.05e-07,16;CL:0000393,6.54e-07,61;CL:0000211,6.54e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001009!5.84e-20!113;UBERON:0000468!1.37e-18!659;UBERON:0004535!1.37e-18!110;UBERON:0004872!1.14e-17!84;UBERON:0000467!9.09e-17!625;UBERON:0000480!1.71e-16!626;UBERON:0003081!3.13e-16!216;UBERON:0000055!8.33e-15!69;UBERON:0001981!2.17e-14!60;UBERON:0007500!2.17e-14!60;UBERON:0004537!2.17e-14!60;UBERON:0006965!2.17e-14!60;UBERON:0001637!2.86e-14!42;UBERON:0003509!2.86e-14!42;UBERON:0004572!2.86e-14!42;UBERON:0002049!2.57e-13!79;UBERON:0007798!2.57e-13!79;UBERON:0000922!6.22e-12!612;UBERON:0007100!1.28e-11!27;UBERON:0004573!1.08e-10!33;UBERON:0004571!1.08e-10!33;UBERON:0004111!1.64e-10!241;UBERON:0000923!2.03e-10!604;UBERON:0005291!2.03e-10!604;UBERON:0006598!2.03e-10!604;UBERON:0002532!2.03e-10!604;UBERON:0002050!2.23e-10!605;UBERON:0005423!2.23e-10!605;UBERON:0000119!3.69e-10!312;UBERON:0000948!4.24e-10!24;UBERON:0005498!4.24e-10!24;UBERON:0004140!4.24e-10!24;UBERON:0009881!4.24e-10!24;UBERON:0004141!4.24e-10!24;UBERON:0003084!4.24e-10!24;UBERON:0007005!4.24e-10!24;UBERON:0004139!4.24e-10!24;UBERON:0004291!4.24e-10!24;UBERON:0000483!5.61e-10!309;UBERON:0000914!1.25e-09!83;UBERON:0002329!1.25e-09!83;UBERON:0003077!1.25e-09!83;UBERON:0003059!1.25e-09!83;UBERON:0007282!1.25e-09!83;UBERON:0009618!1.25e-09!83;UBERON:0007285!1.25e-09!83;UBERON:0000025!2.22e-09!194;UBERON:0000486!3.80e-09!82;UBERON:0004290!6.93e-09!70;UBERON:0003914!2.42e-08!118;UBERON:0004121!2.74e-08!169;UBERON:0001134!2.02e-07!61;UBERON:0002036!2.02e-07!61;UBERON:0003082!2.02e-07!61;UBERON:0002204!2.98e-07!167;UBERON:0000924!3.98e-07!173;UBERON:0006601!3.98e-07!173;UBERON:0002385!4.10e-07!63;UBERON:0001015!4.10e-07!63;UBERON:0000383!4.10e-07!63;UBERON:0000477!4.26e-07!286;UBERON:0001869!6.61e-07!32;UBERON:0002619!8.12e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;3.06e-11;25!UBERON:0001637;1.27e-10;42!UBERON:0003509;1.27e-10;42!UBERON:0004572;1.27e-10;42!UBERON:0000948;1.02e-09;22!UBERON:0004573;1.26e-09;33!UBERON:0004571;1.26e-09;33!UBERON:0007500;4.36e-08;56!UBERON:0001981;4.36e-08;56!UBERON:0004537;4.36e-08;56!UBERON:0000055;2.78e-07;65!UBERON:0002619;8.05e-07;22 | |||
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| ||
|short_description=p1@HK1 | |||
}} | }} |
Latest revision as of 00:57, 19 September 2015
Short description: | p1@HK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HK1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000359426, ENST00000405407, NM_000188, uc001jpl.3, uc009xqd.2_5end |
EntrezGene: | HK1 |
HGNC: | 4922 |
UniProt: | P19367B4DG62A8K7J7B3KXY9Q59FD4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.95e-09 | 32 |
classical monocyte | 3.79e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.79e-08 | 42 |
defensive cell | 8.50e-08 | 48 |
phagocyte | 8.50e-08 | 48 |
embryonic cell | 9.26e-08 | 250 |
mesodermal cell | 1.93e-07 | 121 |
muscle precursor cell | 2.34e-07 | 58 |
myoblast | 2.34e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.34e-07 | 58 |
smooth muscle cell | 5.63e-07 | 43 |
smooth muscle myoblast | 5.63e-07 | 43 |
cardiocyte | 6.05e-07 | 16 |
electrically responsive cell | 6.54e-07 | 61 |
electrically active cell | 6.54e-07 | 61 |