FFCP PHASE1:Hg19::chr10:71176135..71176147,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6865 | |EntrezGene=6865 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11527 | |HGNC=11527 | ||
|TSSclassifier=strong | |||
|UniProt=P21452 | |UniProt=P21452 | ||
|association_with_transcript=475bp_to_ENST00000373306_5end | |association_with_transcript=475bp_to_ENST00000373306_5end | ||
|cluster_id=chr10:71176135..71176147,- | |||
|coexpression_cluster_id=C727 | |||
|description=CAGE_peak_6_at_TACR2_5end | |description=CAGE_peak_6_at_TACR2_5end | ||
|id=chr10:71176135..71176147,- | |id=chr10:71176135..71176147,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.67e-23;1!UBERON:0009847;1.12e-08;3!UBERON:0003353;1.12e-08;3!UBERON:0006595;4.63e-08;86 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000059!6.71e-22!11;UBERON:0000160!6.13e-21!27;UBERON:0005409!2.40e-20!35;UBERON:0001155!1.63e-17!9;UBERON:0004921!4.01e-14!129;UBERON:0004185!4.01e-14!129;UBERON:0007023!6.47e-12!115;UBERON:0001007!2.31e-11!155;UBERON:0001555!2.31e-11!155;UBERON:0007026!2.31e-11!155;UBERON:0006834!7.46e-11!1;UBERON:0001154!1.10e-10!1;UBERON:0001153!1.10e-10!1;UBERON:0004119!3.18e-10!169;UBERON:0000925!3.18e-10!169;UBERON:0006595!3.18e-10!169;UBERON:0004907!1.66e-08!5;UBERON:0001046!2.59e-08!19 | |ontology_enrichment_uberon=UBERON:0000059!6.71e-22!11;UBERON:0000160!6.13e-21!27;UBERON:0005409!2.40e-20!35;UBERON:0001155!1.63e-17!9;UBERON:0004921!4.01e-14!129;UBERON:0004185!4.01e-14!129;UBERON:0007023!6.47e-12!115;UBERON:0001007!2.31e-11!155;UBERON:0001555!2.31e-11!155;UBERON:0007026!2.31e-11!155;UBERON:0006834!7.46e-11!1;UBERON:0001154!1.10e-10!1;UBERON:0001153!1.10e-10!1;UBERON:0004119!3.18e-10!169;UBERON:0000925!3.18e-10!169;UBERON:0006595!3.18e-10!169;UBERON:0004907!1.66e-08!5;UBERON:0001046!2.59e-08!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;4.93e-24;22!UBERON:0001155;8.68e-23;9!UBERON:0004921;1.33e-22;33!UBERON:0000160;5.49e-20;17!UBERON:0000059;8.66e-19;11!UBERON:0001255;2.32e-12;2!UBERON:0001556;2.32e-12;2!UBERON:0001555;1.38e-10;54!UBERON:0001043;9.66e-09;3!UBERON:0001041;3.04e-07;14!UBERON:0001135;8.58e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001155,8.06e-23,9;UBERON:0005409,2.68e-21,25;UBERON:0000160,5.49e-20,17;UBERON:0000059,8.15e-19,11;UBERON:0001255,2.07e-12,2;UBERON:0001556,2.07e-12,2;UBERON:0004921,1.18e-11,118;UBERON:0001007,1.89e-09,145;UBERON:0001555,1.89e-09,145;UBERON:0007026,1.89e-09,145;UBERON:0007023,2.44e-09,114;UBERON:0001043,9.66e-09,3;UBERON:0009143,9.66e-09,3;UBERON:0004119,1.53e-08,160;UBERON:0000925,1.53e-08,160;UBERON:0006595,1.53e-08,160;UBERON:0000162,2.95e-07,14;UBERON:0001353,2.95e-07,14;UBERON:0000163,2.95e-07,14;UBERON:0006866,2.95e-07,14;UBERON:0000164,2.95e-07,14;UBERON:0000931,2.95e-07,14;UBERON:0004122,7.86e-07,15;UBERON:0001135,8.83e-07,15 | |||
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|short_description=p6@TACR2 | |short_description=p6@TACR2 | ||
}} | }} |
Latest revision as of 01:03, 19 September 2015
Short description: | p6@TACR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TACR2_5end |
Coexpression cluster: | C727_colon_smooth_rectum_duodenum_bladder_esophagus_prostate |
Association with transcript: | 475bp_to_ENST00000373306_5end |
EntrezGene: | TACR2 |
HGNC: | 11527 |
UniProt: | P21452 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
colon | 8.06e-23 | 9 |
gastrointestinal system | 2.68e-21 | 25 |
intestine | 5.49e-20 | 17 |
large intestine | 8.15e-19 | 11 |
urinary bladder | 2.07e-12 | 2 |
lower urinary tract | 2.07e-12 | 2 |
subdivision of digestive tract | 1.18e-11 | 118 |
digestive system | 1.89e-09 | 145 |
digestive tract | 1.89e-09 | 145 |
primitive gut | 1.89e-09 | 145 |
adult organism | 2.44e-09 | 114 |
esophagus | 9.66e-09 | 3 |
esophageal region | 9.66e-09 | 3 |
endoderm-derived structure | 1.53e-08 | 160 |
endoderm | 1.53e-08 | 160 |
presumptive endoderm | 1.53e-08 | 160 |
cloaca | 2.95e-07 | 14 |
anal region | 2.95e-07 | 14 |
embryonic cloaca | 2.95e-07 | 14 |
terminal part of digestive tract | 2.95e-07 | 14 |
primitive urogenital sinus | 2.95e-07 | 14 |
proctodeum | 2.95e-07 | 14 |
genitourinary system | 7.86e-07 | 15 |
smooth muscle tissue | 8.83e-07 | 15 |