FFCP PHASE1:Hg19::chr7:5567372..5567416,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=60 | |EntrezGene=60 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=132 | |HGNC=132 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-49bp_to_BC009636_5end | |association_with_transcript=-49bp_to_BC009636_5end | ||
|cluster_id=chr7:5567372..5567416,- | |||
|description=CAGE_peak_5_at_ACTB_5end | |description=CAGE_peak_5_at_ACTB_5end | ||
|id=chr7:5567372..5567416,- | |id=chr7:5567372..5567416,- | ||
|ontology_enrichment_celltype=CL:0000766!2.30e-09!76;CL:0000548!1.49e-08!679;CL:0000004!1.49e-08!679;CL:0000255!1.49e-08!679;CL:0000012!6.58e-08!682;CL:0000763!2.09e-07!112;CL:0000049!2.09e-07!112;CL:0000557!5.07e-07!71;CL:0002009!9.50e-07!65 | |ontology_enrichment_celltype=CL:0000766!2.30e-09!76;CL:0000548!1.49e-08!679;CL:0000004!1.49e-08!679;CL:0000255!1.49e-08!679;CL:0000012!6.58e-08!682;CL:0000763!2.09e-07!112;CL:0000049!2.09e-07!112;CL:0000557!5.07e-07!71;CL:0002009!9.50e-07!65 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.35e-10,72;CL:0000763,5.04e-08,108;CL:0000049,5.04e-08,108;CL:0000557,7.61e-08,67;CL:0002009,1.34e-07,61;CL:0002194,1.74e-07,59;CL:0000576,1.74e-07,59;CL:0000040,1.74e-07,59;CL:0000559,1.74e-07,59;CL:0000839,1.84e-07,66;CL:0000473,5.32e-07,48;CL:0000234,5.32e-07,48 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!2.31e-08!167;UBERON:0002371!3.58e-07!80 | |ontology_enrichment_uberon=UBERON:0002204!2.31e-08!167;UBERON:0002371!3.58e-07!80 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,4.55e-08,167;UBERON:0002371,6.10e-08,76;UBERON:0001474,8.58e-07,82 | |||
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| ||
|short_description=p5@ACTB | |short_description=p5@ACTB | ||
}} | }} |
Latest revision as of 01:54, 19 September 2015
Short description: | p5@ACTB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ACTB_5end |
Coexpression cluster: | NA |
Association with transcript: | -49bp_to_BC009636_5end |
EntrezGene: | ACTB |
HGNC: | 132 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.35e-10 | 72 |
myeloid cell | 5.04e-08 | 108 |
common myeloid progenitor | 5.04e-08 | 108 |
granulocyte monocyte progenitor cell | 7.61e-08 | 67 |
macrophage dendritic cell progenitor | 1.34e-07 | 61 |
monopoietic cell | 1.74e-07 | 59 |
monocyte | 1.74e-07 | 59 |
monoblast | 1.74e-07 | 59 |
promonocyte | 1.74e-07 | 59 |
myeloid lineage restricted progenitor cell | 1.84e-07 | 66 |
defensive cell | 5.32e-07 | 48 |
phagocyte | 5.32e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 4.55e-08 | 167 |
bone marrow | 6.10e-08 | 76 |
bone element | 8.58e-07 | 82 |