FFCP PHASE1:Hg19::chr7:5567987..5568010,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:5567987..5568010,- to FFCP PHASE1:Hg19::chr7:5567987..5568010,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=60 | |EntrezGene=60 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=132 | |HGNC=132 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-258bp_to_ENST00000464611_5end | |||
|cluster_id=chr7:5567987..5568010,- | |||
|coexpression_cluster_id=C1999 | |||
|description=CAGE_peak_7_at_ACTB_5end | |||
|id=chr7:5567987..5568010,- | |||
|ontology_enrichment_celltype=CL:0000144!2.04e-19!625;CL:0002371!2.62e-18!591;CL:0000548!1.07e-15!679;CL:0000004!1.07e-15!679;CL:0000255!1.07e-15!679;CL:0000012!3.88e-15!682;CL:0000003!6.58e-11!722;CL:0000723!6.48e-10!436;CL:0000048!7.18e-10!430;CL:0000222!1.09e-09!119;CL:0000034!2.54e-09!444;CL:0000055!7.90e-09!180;CL:0000063!6.02e-08!578;CL:0000192!6.31e-08!42;CL:0000514!6.31e-08!42;CL:0000393!1.38e-07!60;CL:0000211!1.38e-07!60;CL:0000766!3.55e-07!76;CL:0000220!3.61e-07!246;CL:0000183!4.21e-07!59;CL:0002194!5.26e-07!63;CL:0000576!5.26e-07!63;CL:0000040!5.26e-07!63;CL:0000559!5.26e-07!63;CL:0002321!5.30e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000473;4.62e-07;39!CL:0000234;4.62e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,1.04e-09,433;CL:0000048,1.15e-09,427;CL:0000222,1.88e-09,121;CL:0000034,4.01e-09,441;CL:0000473,1.83e-08,48;CL:0000234,1.83e-08,48;CL:0000766,1.85e-07,72;CL:0002194,2.41e-07,59;CL:0000576,2.41e-07,59;CL:0000040,2.41e-07,59;CL:0000559,2.41e-07,59;CL:0000192,3.27e-07,43;CL:0000514,3.27e-07,43;CL:0000393,5.13e-07,61;CL:0000211,5.13e-07,61;CL:0002009,5.19e-07,61;CL:0002321,7.36e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!8.67e-10!216;UBERON:0002204!5.72e-09!167;UBERON:0002049!4.07e-08!79;UBERON:0007798!4.07e-08!79;UBERON:0005256!8.02e-07!143 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,4.37e-09,203;UBERON:0000926,4.67e-09,315;UBERON:0004120,4.67e-09,315;UBERON:0006603,4.67e-09,315;UBERON:0002204,2.81e-08,167;UBERON:0002049,8.67e-08,78;UBERON:0007798,8.67e-08,78;UBERON:0007503,9.41e-08,78 | |||
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| ||
|short_description=p7@ACTB | |||
}} | }} |
Latest revision as of 01:59, 19 September 2015
Short description: | p7@ACTB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ACTB_5end |
Coexpression cluster: | C1999_Neutrophils_Alveolar_Olfactory_Smooth_Monocytederived_Renal_Dendritic |
Association with transcript: | -258bp_to_ENST00000464611_5end |
EntrezGene: | ACTB |
HGNC: | 132 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 1.04e-09 | 433 |
multi fate stem cell | 1.15e-09 | 427 |
mesodermal cell | 1.88e-09 | 121 |
stem cell | 4.01e-09 | 441 |
defensive cell | 1.83e-08 | 48 |
phagocyte | 1.83e-08 | 48 |
myeloid leukocyte | 1.85e-07 | 72 |
monopoietic cell | 2.41e-07 | 59 |
monocyte | 2.41e-07 | 59 |
monoblast | 2.41e-07 | 59 |
promonocyte | 2.41e-07 | 59 |
smooth muscle cell | 3.27e-07 | 43 |
smooth muscle myoblast | 3.27e-07 | 43 |
electrically responsive cell | 5.13e-07 | 61 |
electrically active cell | 5.13e-07 | 61 |
macrophage dendritic cell progenitor | 5.19e-07 | 61 |
embryonic cell | 7.36e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 4.37e-09 | 203 |
mesoderm | 4.67e-09 | 315 |
mesoderm-derived structure | 4.67e-09 | 315 |
presumptive mesoderm | 4.67e-09 | 315 |
musculoskeletal system | 2.81e-08 | 167 |
vasculature | 8.67e-08 | 78 |
vascular system | 8.67e-08 | 78 |
epithelial vesicle | 9.41e-08 | 78 |