FFCP PHASE1:Hg19::chr7:5569363..5569370,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:5569363..5569370,- to FFCP PHASE1:Hg19::chr7:5569363..5569370,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=60 | |EntrezGene=60 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=132 | |HGNC=132 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-39bp_to_uc003sos.3_5end | |||
|cluster_id=chr7:5569363..5569370,- | |||
|description=CAGE_peak_23_at_ACTB_5end | |||
|id=chr7:5569363..5569370,- | |||
|ontology_enrichment_celltype=CL:0000055!6.58e-17!180;CL:0000359!6.20e-13!32;CL:0000222!4.98e-12!119;CL:0000192!1.30e-11!42;CL:0000514!1.30e-11!42;CL:0000183!2.28e-11!59;CL:0000680!1.21e-10!57;CL:0000056!1.21e-10!57;CL:0000355!1.21e-10!57;CL:0000393!3.10e-10!60;CL:0000211!3.10e-10!60;CL:0000187!3.15e-10!54;CL:0002321!3.57e-09!248;CL:0000220!5.96e-09!246;CL:0002371!2.77e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000359;7.02e-15;32!CL:1000507;2.60e-12;10!CL:1000494;2.60e-12;10!CL:0000192;4.79e-10;43!CL:1000449;3.14e-09;15!CL:1000497;7.28e-08;17!CL:0002518;7.28e-08;17!CL:0002539;1.78e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.43e-16,32;CL:0000192,3.54e-13,43;CL:0000514,3.54e-13,43;CL:1000507,4.96e-13,10;CL:1000494,4.96e-13,10;CL:1000449,8.24e-10,15;CL:0000680,5.00e-09,58;CL:0000056,5.00e-09,58;CL:0000355,5.00e-09,58;CL:0000187,6.16e-09,55;CL:1000497,2.31e-08,17;CL:0002518,2.31e-08,17;CL:0000393,1.74e-07,61;CL:0000211,1.74e-07,61;CL:0002539,2.23e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;4.79e-10;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.39e-17!79;UBERON:0007798!1.39e-17!79;UBERON:0001981!1.42e-15!60;UBERON:0007500!1.42e-15!60;UBERON:0004537!1.42e-15!60;UBERON:0006965!1.42e-15!60;UBERON:0000055!2.63e-15!69;UBERON:0001637!1.14e-14!42;UBERON:0003509!1.14e-14!42;UBERON:0004572!1.14e-14!42;UBERON:0004872!3.84e-13!84;UBERON:0003914!4.65e-13!118;UBERON:0004573!2.84e-12!33;UBERON:0004571!2.84e-12!33;UBERON:0004535!4.60e-12!110;UBERON:0001009!7.58e-12!113;UBERON:0000119!2.59e-11!312;UBERON:0000914!1.02e-10!83;UBERON:0002329!1.02e-10!83;UBERON:0003077!1.02e-10!83;UBERON:0003059!1.02e-10!83;UBERON:0007282!1.02e-10!83;UBERON:0009618!1.02e-10!83;UBERON:0007285!1.02e-10!83;UBERON:0000483!1.14e-10!309;UBERON:0002100!1.36e-10!216;UBERON:0004290!3.22e-10!70;UBERON:0005256!4.77e-10!143;UBERON:0000475!5.95e-09!365;UBERON:0000486!8.91e-09!82;UBERON:0002385!1.60e-08!63;UBERON:0001015!1.60e-08!63;UBERON:0000383!1.60e-08!63;UBERON:0001134!1.85e-08!61;UBERON:0002036!1.85e-08!61;UBERON:0003082!1.85e-08!61;UBERON:0000947!6.69e-08!21;UBERON:0010191!6.69e-08!21;UBERON:0000490!1.11e-07!138;UBERON:0000025!2.49e-07!194;UBERON:0000477!3.23e-07!286;UBERON:0003104!7.84e-07!238;UBERON:0009142!7.84e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;9.16e-13;42!UBERON:0003509;9.16e-13;42!UBERON:0004572;9.16e-13;42!UBERON:0004211;2.60e-12;10!UBERON:0009773;2.60e-12;10!UBERON:0001231;2.60e-12;10!UBERON:0004810;2.60e-12;10!UBERON:0004573;9.97e-11;33!UBERON:0004571;9.97e-11;33!UBERON:0003914;1.11e-10;74!UBERON:0006555;3.14e-09;15!UBERON:0004819;3.14e-09;15!UBERON:0001285;3.14e-09;15!UBERON:0007684;3.14e-09;15!UBERON:0000947;1.14e-08;21!UBERON:0010191;1.14e-08;21!UBERON:0007500;1.51e-08;56!UBERON:0001981;1.51e-08;56!UBERON:0004537;1.51e-08;56!UBERON:0004237;1.78e-07;10!UBERON:0004695;1.78e-07;10!UBERON:0002111;1.78e-07;10!UBERON:0004178;1.78e-07;10 | |||
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| ||
|short_description=p23@ACTB | |||
}} | }} |
Latest revision as of 02:13, 19 September 2015
Short description: | p23@ACTB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_ACTB_5end |
Coexpression cluster: | NA |
Association with transcript: | -39bp_to_uc003sos.3_5end |
EntrezGene: | ACTB |
HGNC: | 132 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.43e-16 | 32 |
smooth muscle cell | 3.54e-13 | 43 |
smooth muscle myoblast | 3.54e-13 | 43 |
kidney tubule cell | 4.96e-13 | 10 |
nephron tubule epithelial cell | 4.96e-13 | 10 |
epithelial cell of nephron | 8.24e-10 | 15 |
muscle precursor cell | 5.00e-09 | 58 |
myoblast | 5.00e-09 | 58 |
multi-potent skeletal muscle stem cell | 5.00e-09 | 58 |
muscle cell | 6.16e-09 | 55 |
kidney cell | 2.31e-08 | 17 |
kidney epithelial cell | 2.31e-08 | 17 |
electrically responsive cell | 1.74e-07 | 61 |
electrically active cell | 1.74e-07 | 61 |
aortic smooth muscle cell | 2.23e-07 | 10 |