FFCP PHASE1:Hg19::chr6:46459464..46459469,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10231 | |EntrezGene=10231 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3041 | |HGNC=3041 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-365bp_to_ENST00000371374_5end | |association_with_transcript=-365bp_to_ENST00000371374_5end | ||
|cluster_id=chr6:46459464..46459469,- | |||
|description=CAGE_peak_12_at_RCAN2_5end | |description=CAGE_peak_12_at_RCAN2_5end | ||
|id=chr6:46459464..46459469,- | |id=chr6:46459464..46459469,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000307;6.12e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,8.05e-07,3;CL:0000069,8.05e-07,3;CL:0000307,8.05e-07,3;CL:0000377,8.05e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;6.12e-07;3 | |||
|ontology_enrichment_disease=DOID:0050687!7.45e-11!143;DOID:305!1.58e-10!106;DOID:1749!6.12e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.44e-15;14!DOID:3908;6.39e-09;5!DOID:4556;3.27e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.26e-15,14;DOID:0050687,7.65e-12,143;DOID:305,6.09e-10,106;DOID:3908,4.20e-09,5;DOID:4556,2.02e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0003075!3.76e-10!86;UBERON:0007284!3.76e-10!86;UBERON:0002346!4.90e-09!90;UBERON:0000475!7.47e-08!365;UBERON:0000481!8.66e-08!347;UBERON:0005743!1.02e-07!86;UBERON:0001049!1.20e-07!57;UBERON:0005068!1.20e-07!57;UBERON:0006241!1.20e-07!57;UBERON:0007135!1.20e-07!57;UBERON:0001017!1.93e-07!82;UBERON:0000119!4.19e-07!312;UBERON:0002616!6.94e-07!59;UBERON:0000955!8.40e-07!69;UBERON:0006238!8.40e-07!69 | |ontology_enrichment_uberon=UBERON:0003075!3.76e-10!86;UBERON:0007284!3.76e-10!86;UBERON:0002346!4.90e-09!90;UBERON:0000475!7.47e-08!365;UBERON:0000481!8.66e-08!347;UBERON:0005743!1.02e-07!86;UBERON:0001049!1.20e-07!57;UBERON:0005068!1.20e-07!57;UBERON:0006241!1.20e-07!57;UBERON:0007135!1.20e-07!57;UBERON:0001017!1.93e-07!82;UBERON:0000119!4.19e-07!312;UBERON:0002616!6.94e-07!59;UBERON:0000955!8.40e-07!69;UBERON:0006238!8.40e-07!69 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0.247532705920093,0.662794751455832,0,0,0,0,0.61560529038394,0.408001382488506,0.626909442956176,0.286235987131057,0.684372125364421,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,1.10864698731282,0.702678285545008,0.261958150995425,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0.23486899728753,0.161872944368132,0.842704840213491,0,0.245668634623536,0,0,0,0.910161361938026,0,0.505008341862199,0.125118519871964,0,0,0,0.150238058906597,0,0.358779271377724,0,0,0.600182192168805,0.103052529238439,0.257640540045629,0,0,0,2.01947019395292,0.184099797284599,0,0,0,0.169560592310488,0,0,0,0.243947412259191,0.397589304964456,0,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0.738155454624648,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0.0925884451585296,0,1.03993478527958,0,0.34779121492523,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0,0.224262168690721,0.87192013766656,0.22001485746285,0,0,0,0,0,0.257207374262142,0,1.5985330740966,0,0,0.823240336780769,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,1.42636905040718,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0.207970861530807,0.178428988797162,0,0.234282829985426,0,0,0,0,0.368738337083406,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.308419387605311,0.355123450626254,0.492762936082855,0,0.813472649219715,0,0,0,0,0,0,0.451199612907412,0.308061348417659,0.784349769176855,0,0.316654886678627,0,0,0.431831832204279,0,0,1.00337954770971,0.764628819135115,0,0.447749509444357,0,0,0.512900250232778,0,0,0,0,0,0,0,0,0,0.616194468458578,0.15350367472613,1.10269257987624,0.322260734604821,0.290033387828457,0.255679882248303,0,0,0,0.893288987462089,0,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0.255897791311334,0,0,0,0,0.54907405947211,0.471249609382746,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0,0,0.354761064070598,0,0,0.379473173765715,0.349934720244983,0,1.34060455107157,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.980160863924127,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.852408440419239,0,0,0,0,0,0.222617410045812,0,4.43363357068786,1.39473591775749,0.276283915531148,1.0077309914171,0.20453736500431,0,0,0.179736702294654,0,0,0.295930216910801,0,2.22273980289274,0,0.556608588971108,0,0.260427761085233,0.349839999984783,0,1.137934482855,1.27126825146383,0,2.06846023944879,0,0.173624994933292,0,0,0,0,1.77328571372128,0.658156191461918,0,0.278847488557207,0.461701551022782,0.113942055847001,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,1.05499032264014,0.326465616318295,0.141353071433941,0.216388639742091,0,0,0.611030144933625,0,0.247127877893006,0.104421949505455,0.337005664903385,0,0.468528891450678,0.547364367646998,0.782658475728359,0,0,1.20990716048664,0,0.252746318513952,0.901940516486955,0,2.65861549082874,0.661983911750998,0.313932918407225,2.38944859545918,0,0,0.173559738335131,0.195984794828755,0.609414446062818,0,0,0,0,0.0821154570532092,0,0,0,1.91858694505451,0.596143835108969,0.50648636764703,0.195551382734803,0.561111741760736,0.213452994739353,0.39961921916426,0.144090417154106,0.114536596165916,0,0,0.124252535565433,0.942776138467182,0,0,0.101998217636322,0,1.20084057741958,0.136905378891993,0,0.429765441419957,0.788662062837943,0.279282401272254,0.229160424011684,0,0,0,0.223171457441873,0.0671834724867263,0,1.16495949527454,0.157566364614447,0.164831716762333,0,0.0984274815147488,0,0,0,0.160753148465019,0.275078873194468,0.415440338029185,0,0,0.364497339948148,0,0.315222829196793,0.0524545881349981,2.85120908602398,0.35857467866569,1.53532157855556,0,0,0,0,0,0,0,0.574647645245373,0,0.906496732161005,0,0,0.517131825446202,0.52893040697076,0.171086837884329,0,0.427149650270779,0,0,0,0,0.121792598380896,0.638341257770182,0,0,0,0.327872630709804,0.942324577501406,0,0.488105059607853,0.1251909307065,0.573409195690071,0.110929051536852,0.310482014706917,0.830091809617385,0,1.36484205787483,0,0.470531639396343,0,0,0,0,0,1.32582103692562,0.50313580350515,0,0,0.151230923763239,0.310874401165561,0,0.318593534327405,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0.363697318405119,0.751873899297419,0,0.398095888698616,1.20008329398946,0,0,0,0,0.214441591374926,0.260994291965212,0,0,0,0,0,0,0,0.192914038270915,0.168942440653073,0.512483037175893,0,0,0.13825843615173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| ||
|short_description=p12@RCAN2 | |short_description=p12@RCAN2 | ||
}} | }} |
Latest revision as of 02:55, 19 September 2015
Short description: | p12@RCAN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_RCAN2_5end |
Coexpression cluster: | NA |
Association with transcript: | -365bp_to_ENST00000371374_5end |
EntrezGene: | RCAN2 |
HGNC: | 3041 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 8.05e-07 | 3 |
branched duct epithelial cell | 8.05e-07 | 3 |
tracheal epithelial cell | 8.05e-07 | 3 |
tracheoblast | 8.05e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.26e-15 | 14 |
cell type cancer | 7.65e-12 | 143 |
carcinoma | 6.09e-10 | 106 |
non-small cell lung carcinoma | 4.20e-09 | 5 |
lung large cell carcinoma | 2.02e-07 | 3 |