FFCP PHASE1:Hg19::chrX:11777758..11777795,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:11777758..11777795,+
|short_description=p3@MSL3
|description=CAGE_peak_3_at_MSL3_5end
|association_with_transcript=0bp_to_ENST00000478462,uc004cuy.2_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10943 | |EntrezGene=10943 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7370 | |HGNC=7370 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000478462,uc004cuy.2_5end | |||
|cluster_id=chrX:11777758..11777795,+ | |||
|description=CAGE_peak_3_at_MSL3_5end | |||
|id=chrX:11777758..11777795,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.53e-33!140;CL:0000037!6.65e-33!172;CL:0000566!6.65e-33!172;CL:0002032!2.41e-30!165;CL:0000837!2.41e-30!165;CL:0000988!3.62e-30!182;CL:0002031!1.57e-27!124;CL:0000542!3.43e-26!53;CL:0000051!3.43e-26!53;CL:0000838!9.15e-26!52;CL:0002087!5.39e-25!119;CL:0000945!9.30e-14!24;CL:0000826!9.30e-14!24;CL:0000791!1.15e-11!18;CL:0000789!1.15e-11!18;CL:0002420!1.15e-11!18;CL:0002419!1.15e-11!18;CL:0000790!1.15e-11!18;CL:0000084!1.49e-11!25;CL:0000827!1.49e-11!25;CL:0000763!2.56e-09!112;CL:0000049!2.56e-09!112;CL:0000236!9.56e-09!14;CL:0000625!2.32e-08!11;CL:0000766!2.51e-08!76;CL:0002139!1.12e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.97e-16;53!CL:0000945;1.00e-14;24!CL:0000084;7.71e-13;25!CL:0000791;1.12e-12;18!CL:0000789;1.12e-12;18!CL:0002419;1.12e-12;18!CL:0002087;2.14e-09;104!CL:0000625;4.62e-09;11!CL:0000236;1.20e-08;13!CL:0002139;5.90e-08;24!CL:0000738;3.94e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.68e-34,136;CL:0000037,1.80e-33,168;CL:0000988,1.32e-31,177;CL:0002032,9.31e-31,161;CL:0000837,9.31e-31,161;CL:0002031,1.17e-28,120;CL:0000542,3.81e-28,53;CL:0000051,3.81e-28,53;CL:0000838,1.10e-27,52;CL:0002087,6.16e-26,115;CL:0000945,1.01e-14,24;CL:0000826,1.01e-14,24;CL:0000791,1.84e-12,18;CL:0000789,1.84e-12,18;CL:0002420,1.84e-12,18;CL:0002419,1.84e-12,18;CL:0000790,1.84e-12,18;CL:0000084,2.41e-12,25;CL:0000827,2.41e-12,25;CL:0000236,2.58e-09,14;CL:0000625,6.70e-09,11;CL:0000763,1.05e-08,108;CL:0000049,1.05e-08,108;CL:0000766,3.88e-08,72;CL:0002139,5.58e-08,24 | |||
|ontology_enrichment_development_v019=CL:0000051;1.97e-16;53!CL:0000790;1.12e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.20e-12!112;UBERON:0002390!1.37e-11!102;UBERON:0003061!1.37e-11!102;UBERON:0000178!3.12e-08!15;UBERON:0000179!3.12e-08!15;UBERON:0000463!3.12e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.48e-09;15!UBERON:0000179;7.48e-09;15!UBERON:0000463;7.48e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.48e-13,108;UBERON:0002390,4.78e-12,98;UBERON:0003061,4.78e-12,98;UBERON:0000178,9.23e-09,15;UBERON:0000179,9.23e-09,15;UBERON:0000463,9.23e-09,15;UBERON:0002405,2.89e-08,93 | |||
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| ||
|short_description=p3@MSL3 | |||
}} | }} |
Latest revision as of 04:06, 19 September 2015
Short description: | p3@MSL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MSL3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000478462, uc004cuy.2_5end |
EntrezGene: | MSL3 |
HGNC: | 7370 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.68e-34 | 136 |
hematopoietic stem cell | 1.80e-33 | 168 |
hematopoietic cell | 1.32e-31 | 177 |
hematopoietic oligopotent progenitor cell | 9.31e-31 | 161 |
hematopoietic multipotent progenitor cell | 9.31e-31 | 161 |
hematopoietic lineage restricted progenitor cell | 1.17e-28 | 120 |
lymphocyte | 3.81e-28 | 53 |
common lymphoid progenitor | 3.81e-28 | 53 |
lymphoid lineage restricted progenitor cell | 1.10e-27 | 52 |
nongranular leukocyte | 6.16e-26 | 115 |
lymphocyte of B lineage | 1.01e-14 | 24 |
pro-B cell | 1.01e-14 | 24 |
mature alpha-beta T cell | 1.84e-12 | 18 |
alpha-beta T cell | 1.84e-12 | 18 |
immature T cell | 1.84e-12 | 18 |
mature T cell | 1.84e-12 | 18 |
immature alpha-beta T cell | 1.84e-12 | 18 |
T cell | 2.41e-12 | 25 |
pro-T cell | 2.41e-12 | 25 |
B cell | 2.58e-09 | 14 |
CD8-positive, alpha-beta T cell | 6.70e-09 | 11 |
myeloid cell | 1.05e-08 | 108 |
common myeloid progenitor | 1.05e-08 | 108 |
myeloid leukocyte | 3.88e-08 | 72 |
endothelial cell of vascular tree | 5.58e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.48e-13 | 108 |
hematopoietic system | 4.78e-12 | 98 |
blood island | 4.78e-12 | 98 |
blood | 9.23e-09 | 15 |
haemolymphatic fluid | 9.23e-09 | 15 |
organism substance | 9.23e-09 | 15 |
immune system | 2.89e-08 | 93 |