FFCP PHASE1:Hg19::chr15:76304731..76304779,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=145957 | |EntrezGene=145957 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29862 | |HGNC=29862 | ||
|TSSclassifier=strong | |||
|UniProt=E9PJI7 | |UniProt=E9PJI7 | ||
|association_with_transcript=0bp_to_ENST00000461391,uc010bkn.2_5end | |association_with_transcript=0bp_to_ENST00000461391,uc010bkn.2_5end | ||
|cluster_id=chr15:76304731..76304779,- | |||
|description=CAGE_peak_1_at_NRG4_5end | |description=CAGE_peak_1_at_NRG4_5end | ||
|id=chr15:76304731..76304779,- | |id=chr15:76304731..76304779,- | ||
|ontology_enrichment_celltype=CL:0000223!9.95e-07!59 | |ontology_enrichment_celltype=CL:0000223!9.95e-07!59 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.81e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.43e-16;29 | |||
|ontology_enrichment_disease=DOID:305!6.46e-17!106;DOID:0050687!3.04e-16!143;DOID:162!2.37e-14!235;DOID:14566!6.68e-14!239 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.04e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.48e-21,106;DOID:162,3.69e-16,235;DOID:0050687,5.21e-16,143;DOID:14566,1.63e-15,239;DOID:1749,1.09e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004921!3.02e-14!129;UBERON:0004185!3.02e-14!129;UBERON:0004119!7.22e-14!169;UBERON:0000925!7.22e-14!169;UBERON:0006595!7.22e-14!169;UBERON:0001007!6.67e-13!155;UBERON:0001555!6.67e-13!155;UBERON:0007026!6.67e-13!155;UBERON:0000077!1.09e-11!130;UBERON:0001737!5.12e-11!9;UBERON:0001557!9.49e-10!19;UBERON:0001041!2.20e-09!98;UBERON:0001004!1.82e-08!72;UBERON:0000072!6.92e-08!46;UBERON:0000065!1.03e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.72e-20;9!UBERON:0001557;1.72e-20;9!UBERON:0000072;1.36e-10;37!UBERON:0000065;3.43e-08;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.48e-20,9;UBERON:0004921,3.54e-14,118;UBERON:0001007,2.60e-13,145;UBERON:0001555,2.60e-13,145;UBERON:0007026,2.60e-13,145;UBERON:0001557,1.10e-12,19;UBERON:0001041,2.14e-12,87;UBERON:0004119,7.15e-12,160;UBERON:0000925,7.15e-12,160;UBERON:0006595,7.15e-12,160;UBERON:0008947,1.49e-11,38;UBERON:0003258,1.49e-11,38;UBERON:0000072,4.79e-11,47;UBERON:0000065,5.16e-09,54;UBERON:0001004,6.64e-09,74 | |||
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| ||
|short_description=p1@NRG4 | |short_description=p1@NRG4 | ||
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Latest revision as of 04:34, 19 September 2015
Short description: | p1@NRG4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NRG4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000461391, uc010bkn.2_5end |
EntrezGene: | NRG4 |
HGNC: | 29862 |
UniProt: | E9PJI7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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epithelial cell | 6.81e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.48e-20 | 9 |
subdivision of digestive tract | 3.54e-14 | 118 |
digestive system | 2.60e-13 | 145 |
digestive tract | 2.60e-13 | 145 |
primitive gut | 2.60e-13 | 145 |
upper respiratory tract | 1.10e-12 | 19 |
foregut | 2.14e-12 | 87 |
endoderm-derived structure | 7.15e-12 | 160 |
endoderm | 7.15e-12 | 160 |
presumptive endoderm | 7.15e-12 | 160 |
respiratory primordium | 1.49e-11 | 38 |
endoderm of foregut | 1.49e-11 | 38 |
segment of respiratory tract | 4.79e-11 | 47 |
respiratory tract | 5.16e-09 | 54 |
respiratory system | 6.64e-09 | 74 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.48e-21 | 106 |
cancer | 3.69e-16 | 235 |
cell type cancer | 5.21e-16 | 143 |
disease of cellular proliferation | 1.63e-15 | 239 |
squamous cell carcinoma | 1.09e-07 | 14 |