FFCP PHASE1:Hg19::chr10:73848262..73848315,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:73848262..73848315,-
|short_description=p1@SPOCK2
|description=CAGE_peak_1_at_SPOCK2_5end
|association_with_transcript=0bp_to_ENST00000495888_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9806 | |EntrezGene=9806 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13564 | |HGNC=13564 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000495888_5end | |||
|cluster_id=chr10:73848262..73848315,- | |||
|coexpression_cluster_id=C676 | |||
|description=CAGE_peak_1_at_SPOCK2_5end | |||
|id=chr10:73848262..73848315,- | |||
|ontology_enrichment_celltype=CL:0000738!4.71e-19!140;CL:0002087!2.09e-15!119;CL:0000791!1.30e-14!18;CL:0000789!1.30e-14!18;CL:0002420!1.30e-14!18;CL:0002419!1.30e-14!18;CL:0000790!1.30e-14!18;CL:0002031!2.51e-12!124;CL:0000542!1.17e-11!53;CL:0000051!1.17e-11!53;CL:0000838!1.99e-11!52;CL:0000084!1.43e-10!25;CL:0000827!1.43e-10!25;CL:0000037!1.85e-10!172;CL:0000566!1.85e-10!172;CL:0000625!1.52e-09!11;CL:0000988!1.86e-09!182;CL:0002032!9.26e-09!165;CL:0000837!9.26e-09!165 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.49e-16;18!CL:0000789;2.49e-16;18!CL:0002419;2.49e-16;18!CL:0000084;1.89e-11;25!CL:0000625;1.36e-10;11!CL:0000542;7.81e-08;53!CL:0000624;6.94e-07;6!CL:0002087;8.96e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.45e-19,136;CL:0002087,2.18e-16,115;CL:0000791,2.51e-16,18;CL:0000789,2.51e-16,18;CL:0002420,2.51e-16,18;CL:0002419,2.51e-16,18;CL:0000790,2.51e-16,18;CL:0002031,3.77e-12,120;CL:0000542,4.71e-12,53;CL:0000051,4.71e-12,53;CL:0000838,8.52e-12,52;CL:0000084,1.81e-11,25;CL:0000827,1.81e-11,25;CL:0000037,1.29e-10,168;CL:0000625,1.36e-10,11;CL:0000988,8.75e-10,177;CL:0002032,4.85e-09,161;CL:0000837,4.85e-09,161;CL:0000624,6.95e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;2.49e-16;18!CL:0000051;7.81e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.31e-45!115;UBERON:0001049!8.89e-27!57;UBERON:0005068!8.89e-27!57;UBERON:0006241!8.89e-27!57;UBERON:0007135!8.89e-27!57;UBERON:0002616!8.21e-22!59;UBERON:0002780!6.09e-21!41;UBERON:0001890!6.09e-21!41;UBERON:0006240!6.09e-21!41;UBERON:0003080!6.76e-21!42;UBERON:0001017!1.22e-20!82;UBERON:0005743!2.85e-19!86;UBERON:0002020!3.34e-18!34;UBERON:0003528!3.34e-18!34;UBERON:0001893!4.34e-18!34;UBERON:0000955!7.23e-18!69;UBERON:0006238!7.23e-18!69;UBERON:0000073!1.27e-17!94;UBERON:0001016!1.27e-17!94;UBERON:0002791!1.62e-17!33;UBERON:0001869!1.93e-17!32;UBERON:0003075!2.89e-17!86;UBERON:0007284!2.89e-17!86;UBERON:0002346!7.87e-16!90;UBERON:0000956!1.53e-13!25;UBERON:0000203!1.53e-13!25;UBERON:0002619!1.59e-13!22;UBERON:0001950!1.78e-12!20;UBERON:0003056!2.79e-12!61;UBERON:0000153!3.41e-08!129;UBERON:0007811!3.41e-08!129;UBERON:0003076!4.37e-07!15;UBERON:0003057!4.37e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;6.31e-17;32!UBERON:0003528;8.62e-17;34!UBERON:0002020;8.62e-17;34!UBERON:0001893;9.16e-17;34!UBERON:0002791;1.13e-16;32!UBERON:0002780;2.92e-16;41!UBERON:0001890;2.92e-16;41!UBERON:0000073;3.43e-16;53!UBERON:0002616;3.43e-16;53!UBERON:0002619;4.18e-15;22!UBERON:0000956;2.60e-14;25!UBERON:0000203;2.60e-14;25!UBERON:0001950;6.45e-14;20!UBERON:0007023;1.71e-13;114!UBERON:0000955;9.45e-10;68!UBERON:0001017;1.06e-09;75!UBERON:0001016;4.88e-08;83!UBERON:0004732;6.77e-07;13!UBERON:0002420;8.63e-07;9!UBERON:0007245;8.63e-07;9!UBERON:0010009;8.63e-07;9!UBERON:0010011;8.63e-07;9!UBERON:0000454;8.63e-07;9!UBERON:0000125;9.52e-07;9!UBERON:0002308;9.52e-07;9!UBERON:0000178;9.87e-07;15!UBERON:0000179;9.87e-07;15!UBERON:0000463;9.87e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.91e-49,114;UBERON:0001049,2.09e-29,56;UBERON:0005068,2.09e-29,56;UBERON:0006241,2.09e-29,56;UBERON:0007135,2.09e-29,56;UBERON:0000073,8.69e-28,53;UBERON:0002616,8.69e-28,53;UBERON:0002780,1.24e-22,41;UBERON:0001890,1.24e-22,41;UBERON:0003080,1.24e-22,41;UBERON:0006240,1.24e-22,41;UBERON:0001017,2.45e-21,81;UBERON:0000955,6.24e-20,68;UBERON:0006238,6.24e-20,68;UBERON:0003528,1.60e-19,34;UBERON:0002020,1.60e-19,34;UBERON:0001893,2.14e-19,34;UBERON:0001869,1.17e-18,32;UBERON:0001016,2.18e-18,89;UBERON:0002791,2.61e-18,32;UBERON:0003075,1.33e-17,82;UBERON:0007284,1.33e-17,82;UBERON:0002346,8.94e-16,86;UBERON:0002619,4.28e-15,22;UBERON:0000956,2.87e-14,25;UBERON:0000203,2.87e-14,25;UBERON:0001950,6.60e-14,20;UBERON:0003056,2.48e-12,61;UBERON:0010371,1.44e-10,104;UBERON:0010314,5.89e-08,132;UBERON:0003076,6.25e-08,15;UBERON:0003057,6.25e-08,15;UBERON:0011216,1.70e-07,223;UBERON:0004732,6.55e-07,13;UBERON:0000025,6.66e-07,192;UBERON:0002420,8.77e-07,9;UBERON:0007245,8.77e-07,9;UBERON:0010009,8.77e-07,9;UBERON:0010011,8.77e-07,9;UBERON:0000454,8.77e-07,9;UBERON:0000125,9.60e-07,9;UBERON:0002308,9.60e-07,9;UBERON:0000178,9.89e-07,15;UBERON:0000179,9.89e-07,15;UBERON:0000463,9.89e-07,15 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,52.0955945383199,221.20297024726,0,0.527533956456907,0,1.32558950291166,0,0,0,0,2.83178433576612,0,3.76145665773705,6.01095572975219,3.14811177667634,0.87879847716362,0,0,0,124.303111484254,312.053300653034,55.8886205171034,0,0,0,0,0,0.587200878669695,71.4654077006122,108.093457186406,113.930707125822,8.06095707263728,28.5026426096702,12.8787783817093,5.08893835728477,9.44689859222024,1.69808842831471,6.27558399645349,9.86802931252382,2.16794459626573,6.32923263108731,12.5518746199259,4.02019790810595,14.8240642716746,10.973239620925,8.12558919566051,6.77672422353377,8.18718450173537,3.82029923556644,13.4676912643197,16.6883094079569,9.59005688698562,4.94776950280074,6.98122801675712,4.68847225585964,8.41606792022894,11.9150897185139,4.35975574296902,8.54245461872927,12.5155900420848,1.95469960234605,17.5565855763677,13.9945501675275,2.84816148696796,0,0.212604299965044,0,0.112328631146495,0,0.16072558669708,0.285012743741249,0,0,58.0787606722365,44.7833661234948,64.044666278176,39.6859106986852,59.6590020683659,32.1861366374511,47.5952308405101,47.7026877267682,147.995371968457,193.78827249241,227.834843962636,13.2171328579026,125.553918107864,0.263384084775077,428.433879307928,670.083350487326,666.14885675841,285.052974641106,361.121871430018,338.988628906069,321.464101873054,353.951021524196,337.618369966163,334.516180821268,416.225538606829,305.753980185187,304.338873290115,250.110052902191,228.265114691111,272.994506762419,407.046615879856,366.530934482907,410.824608553559,250.073719333529,397.01643137159,363.901464766105,346.636978066719,266.957817203593,219.415123949613,218.603970223126,290.308829581946,360.92224345546,304.830972787724,293.603792534581,238.127119107104,497.968655765089,689.193384534098,521.802327189725,0,0,0.12786256184353,0,0,0,0,0,0.189069634328136,0.221729397462564,1.31752178539689,55.4696384732813,0,0,1.29818957461873,1.39303789839414,1.19662164466979,6.91622810485492,5.14795419702115,13.3724700478643,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,117.284571518096,81.4338554711483,0,0,0,0,0,6.38403087957043,0,0,0,0.933633106199299,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.132529768321485,2.09149097165133,1.45125477021519,1.7662459561294,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,1.96565443335525,5.90789906681404,9.71218818712231,0,0.171567810298526,0,0,0,0.277765335475589,0,0,0,0.115930404975077,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0.594524649154913,0,0,0.283550194484773,0,0,0.383382679165211,0,0,1.86595303986695,0.576479813667846,0.37872730027914,0,0,0,1.71072446022705,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0.714889968290738,0,0,0,1.42156779497018,0,0,0,0.399891964728228,0,0,2.10833939483032,0,0,0,0,0,0,56.7150828607248,366.674244735787,533.246992627586,362.05570534517,9.90969034467607,2.60279707715243,1.54657762555539,2.34522771468088,1.27587750330633,35.9523371494648,20.9413021442817,46.414537504836,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0.343143423810856,219.794411768629,221.754198441538,286.456765144445,0,0,0.30239029332968,0,0,0,0.128139149255701,0,0.321707842287215,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,30.681573677704,17.3284508484933,46.2766363814345,52.6101208751738,19.527051345182,0,0,1.72732732881711,4.62681758070868,43.3514300070165,102.846403640245,21.4096069357832,49.0334845267947,16.1189823399968,0,0,0,0,0,12.7770854443176,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0,1.78975917573812,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,7.435763954394,0,0,0,0,0,2.53329162357197,0.329294892959902,0,0.349934720244983,0,11.3951386841084,0,11.0148246908832,0,0,0,0,129.399140354203,119.283404314211,111.650848686136,152.468336292985,154.672214680409,135.530922039278,121.507073378576,137.210655498909,0,0,0.245040215981032,7.9895365304059,0,0.640276590135727,0,0.997896857164083,1.1490322207942,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95572084034114,0,0,0,0.23874448473769,1.48482340416319,0,137.192375391749,116.474276787905,0,0,0,10.9586393538088,71.8338180380984,0.251932747854276,0,0.246169610922139,0,44.9341755736634,39.2056372539584,0,10.5548444031519,165.243333719388,0,162.847901343997,131.081322702696,73.8571052604418,0,0,1.44999915086959,0,0,0,3.44743373241465,0.291604613383254,0.347249989866585,137.289914801145,176.432589708972,192.252987759525,157.907183181789,275.74592848366,129.656769717998,0,0,4.92481654424301,0,0,0,0,3.19001159731919,0,6.92945208824225,44.9650512061241,0,0,0,0,0,0,0,0,1.95879369790977,0,0,17.9147147594131,13.1801771109975,34.217688116283,0,0,0,36.531414075527,19.2618635351709,146.883807469788,0,0,0,2.36750641709634,33.8774004936259,26.0161847385917,9.28842720538773,0,0,0,0,0,0,0,0,0,0,0,7.513246734407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| ||
|short_description=p1@SPOCK2 | |||
}} | }} |
Latest revision as of 05:02, 19 September 2015
Short description: | p1@SPOCK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SPOCK2_5end |
Coexpression cluster: | C676_serous_CD8_CD4_Natural_gall_cerebellum_Basophils |
Association with transcript: | 0bp_to_ENST00000495888_5end |
EntrezGene: | SPOCK2 |
HGNC: | 13564 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.45e-19 | 136 |
nongranular leukocyte | 2.18e-16 | 115 |
mature alpha-beta T cell | 2.51e-16 | 18 |
alpha-beta T cell | 2.51e-16 | 18 |
immature T cell | 2.51e-16 | 18 |
mature T cell | 2.51e-16 | 18 |
immature alpha-beta T cell | 2.51e-16 | 18 |
hematopoietic lineage restricted progenitor cell | 3.77e-12 | 120 |
lymphocyte | 4.71e-12 | 53 |
common lymphoid progenitor | 4.71e-12 | 53 |
lymphoid lineage restricted progenitor cell | 8.52e-12 | 52 |
T cell | 1.81e-11 | 25 |
pro-T cell | 1.81e-11 | 25 |
hematopoietic stem cell | 1.29e-10 | 168 |
CD8-positive, alpha-beta T cell | 1.36e-10 | 11 |
hematopoietic cell | 8.75e-10 | 177 |
hematopoietic oligopotent progenitor cell | 4.85e-09 | 161 |
hematopoietic multipotent progenitor cell | 4.85e-09 | 161 |
CD4-positive, alpha-beta T cell | 6.95e-07 | 6 |