FFCP PHASE1:Hg19::chr10:73848636..73848651,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:73848636..73848651,-
|short_description=p12@SPOCK2
|description=CAGE_peak_12_at_SPOCK2_5end
|association_with_transcript=-105bp_to_ENST00000373109,NM_0012...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9806 | |EntrezGene=9806 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13564 | |HGNC=13564 | ||
|UniProt=A6NIR4, | |TSSclassifier=strong | ||
|UniProt=A6NIR4,Q92563 | |||
|association_with_transcript=-105bp_to_ENST00000373109,NM_001244950,uc001jso.1_5end | |||
|cluster_id=chr10:73848636..73848651,- | |||
|coexpression_cluster_id=C524 | |||
|description=CAGE_peak_12_at_SPOCK2_5end | |||
|id=chr10:73848636..73848651,- | |||
|ontology_enrichment_celltype=CL:0000791!3.87e-10!18;CL:0000789!3.87e-10!18;CL:0002420!3.87e-10!18;CL:0002419!3.87e-10!18;CL:0000790!3.87e-10!18;CL:0000084!5.32e-08!25;CL:0000827!5.32e-08!25;CL:0000624!1.57e-07!6;CL:0000542!1.80e-07!53;CL:0000051!1.80e-07!53;CL:0000784!6.92e-07!3;CL:0000838!8.30e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000650;7.57e-17;2!CL:1000500;7.57e-17;2!CL:1000618;7.57e-17;2!CL:1001318;7.57e-17;2!CL:0002173;7.57e-17;2!CL:0000784;1.51e-11;3!CL:0000669;6.99e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,8.93e-17,2;CL:1000500,8.93e-17,2;CL:1000618,8.93e-17,2;CL:1001318,8.93e-17,2;CL:0002173,8.93e-17,2;CL:0000784,1.29e-11,3;CL:0000669,7.58e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.67e-25;3!UBERON:0003057;2.67e-25;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.57e-25!57;UBERON:0005068!2.57e-25!57;UBERON:0006241!2.57e-25!57;UBERON:0007135!2.57e-25!57;UBERON:0007023!1.93e-19!115;UBERON:0002616!1.08e-18!59;UBERON:0002780!1.19e-16!41;UBERON:0001890!1.19e-16!41;UBERON:0006240!1.19e-16!41;UBERON:0001017!1.38e-16!82;UBERON:0005743!2.32e-16!86;UBERON:0003080!4.19e-16!42;UBERON:0000073!5.83e-16!94;UBERON:0001016!5.83e-16!94;UBERON:0001893!1.09e-15!34;UBERON:0000955!1.20e-15!69;UBERON:0006238!1.20e-15!69;UBERON:0002346!2.46e-15!90;UBERON:0002791!1.77e-14!33;UBERON:0003075!1.78e-14!86;UBERON:0007284!1.78e-14!86;UBERON:0002020!3.36e-14!34;UBERON:0003528!3.36e-14!34;UBERON:0001869!1.09e-13!32;UBERON:0002619!2.68e-13!22;UBERON:0001950!4.53e-13!20;UBERON:0000956!2.64e-11!25;UBERON:0000203!2.64e-11!25;UBERON:0003076!7.81e-11!15;UBERON:0003057!7.81e-11!15;UBERON:0003056!4.62e-10!61;UBERON:0000153!1.09e-07!129;UBERON:0007811!1.09e-07!129;UBERON:0002240!2.91e-07!3;UBERON:0000033!4.41e-07!123;UBERON:0000200!4.91e-07!6;UBERON:0000924!7.34e-07!173;UBERON:0006601!7.34e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;2.67e-25;3!UBERON:0005174;2.67e-25;3!UBERON:0001137;2.67e-25;3!UBERON:0003567;7.57e-17;2!UBERON:0003838;7.57e-17;2!UBERON:0003586;7.57e-17;2!UBERON:0005169;7.57e-17;2!UBERON:0002321;7.57e-17;2!UBERON:0005215;7.57e-17;2!UBERON:0002303;7.57e-17;2!UBERON:0002319;7.57e-17;2!UBERON:0000489;1.45e-09;29!UBERON:0003112;2.76e-09;1!UBERON:0011158;2.76e-09;1!UBERON:0003128;2.76e-09;1!UBERON:0001703;2.76e-09;1!UBERON:0002241;2.76e-09;1!UBERON:0003891;6.99e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,1.23e-25,3;UBERON:0005174,1.23e-25,3;UBERON:0001137,1.23e-25,3;UBERON:0003076,4.40e-19,15;UBERON:0003057,4.40e-19,15;UBERON:0003567,8.93e-17,2;UBERON:0003838,8.93e-17,2;UBERON:0003586,8.93e-17,2;UBERON:0005169,8.93e-17,2;UBERON:0002321,8.93e-17,2;UBERON:0005215,8.93e-17,2;UBERON:0002303,8.93e-17,2;UBERON:0002319,8.93e-17,2;UBERON:0003112,3.25e-09,1;UBERON:0011158,3.25e-09,1;UBERON:0003128,3.25e-09,1;UBERON:0001703,3.25e-09,1;UBERON:0002241,3.25e-09,1;UBERON:0004761,3.25e-09,1;UBERON:0009617,3.25e-09,1;UBERON:0000489,5.79e-09,31;UBERON:0003891,7.58e-09,4 | |||
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| ||
|short_description=p12@SPOCK2 | |||
}} | }} |
Latest revision as of 05:08, 19 September 2015
Short description: | p12@SPOCK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SPOCK2_5end |
Coexpression cluster: | C524_serous_endometrioid_endometrial_mesothelioma_gall_clear_papillotubular |
Association with transcript: | -105bp_to_ENST00000373109, NM_001244950, uc001jso.1_5end |
EntrezGene: | SPOCK2 |
HGNC: | 13564 |
UniProt: | A6NIR4Q92563 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 8.93e-17 | 2 |
kidney interstitial cell | 8.93e-17 | 2 |
juxtaglomerular complex cell | 8.93e-17 | 2 |
renal interstitial pericyte | 8.93e-17 | 2 |
extraglomerular mesangial cell | 8.93e-17 | 2 |
plasmacytoid dendritic cell | 1.29e-11 | 3 |
pericyte cell | 7.58e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 1.23e-25 | 3 |
dorsal region element | 1.23e-25 | 3 |
dorsum | 1.23e-25 | 3 |
posterior neural tube | 4.40e-19 | 15 |
chordal neural plate | 4.40e-19 | 15 |
abdomen connective tissue | 8.93e-17 | 2 |
abdominal segment connective tissue | 8.93e-17 | 2 |
trunk connective tissue | 8.93e-17 | 2 |
interstitial tissue | 8.93e-17 | 2 |
extraglomerular mesangium | 8.93e-17 | 2 |
kidney interstitium | 8.93e-17 | 2 |
juxtaglomerular apparatus | 8.93e-17 | 2 |
mesangium | 8.93e-17 | 2 |
olfactory region | 3.25e-09 | 1 |
primary subdivision of skull | 3.25e-09 | 1 |
cranium | 3.25e-09 | 1 |
neurocranium | 3.25e-09 | 1 |
chondrocranium | 3.25e-09 | 1 |
cartilaginous neurocranium | 3.25e-09 | 1 |
head paraxial mesoderm | 3.25e-09 | 1 |
cavitated compound organ | 5.79e-09 | 31 |
stroma | 7.58e-09 | 4 |