FFCP PHASE1:Hg19::chr1:1846607..1846616,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=163688 | |EntrezGene=163688 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24193 | |HGNC=24193 | ||
|TSSclassifier=strong | |||
|UniProt=B1AKR1 | |UniProt=B1AKR1 | ||
|association_with_transcript=60bp_to_ENST00000378604_5end | |association_with_transcript=60bp_to_ENST00000378604_5end | ||
|cluster_id=chr1:1846607..1846616,+ | |||
|coexpression_cluster_id=C197 | |coexpression_cluster_id=C197 | ||
|description=CAGE_peak_6_at_CALML6_5end | |description=CAGE_peak_6_at_CALML6_5end | ||
|id=chr1:1846607..1846616,+ | |id=chr1:1846607..1846616,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004874;2.58e-34;1!UBERON:0008814;5.48e-18;2!UBERON:0010056;5.48e-18;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!2.09e-27!2;UBERON:0001723!3.86e-19!3;UBERON:0001033!3.86e-19!3;UBERON:0010056!3.86e-19!3;UBERON:0000078!2.06e-18!18;UBERON:0000166!8.67e-16!21;UBERON:0000989!5.42e-15!1;UBERON:0008811!5.42e-15!1;UBERON:0006258!5.42e-15!1;UBERON:0005876!5.42e-15!1;UBERON:0004874!5.42e-15!1;UBERON:0002426!8.17e-15!1;UBERON:0003831!8.17e-15!1;UBERON:0003898!8.17e-15!1;UBERON:0004830!8.17e-15!1;UBERON:0001774!8.17e-15!1;UBERON:0003830!8.17e-15!1;UBERON:0005175!8.17e-15!1;UBERON:0003897!8.17e-15!1;UBERON:0001103!8.17e-15!1;UBERON:0010084!8.17e-15!1;UBERON:0007029!1.07e-14!1;UBERON:0001831!1.84e-14!1;UBERON:0001567!1.84e-14!1;UBERON:0008801!1.84e-14!1;UBERON:0002372!3.15e-14!1;UBERON:0001961!3.15e-14!1;UBERON:0001744!3.15e-14!1;UBERON:0001735!3.15e-14!1;UBERON:0001042!1.18e-12!10;UBERON:0009145!1.18e-12!10;UBERON:0000165!7.67e-12!28;UBERON:0000930!7.67e-12!28;UBERON:0006562!1.47e-11!11;UBERON:0001044!1.01e-09!6;UBERON:0003293!1.01e-09!6;UBERON:0003294!1.01e-09!6;UBERON:0010047!1.01e-09!6;UBERON:0000167!1.01e-09!6;UBERON:0000161!1.83e-09!35;UBERON:0001630!4.69e-08!2;UBERON:0005090!4.69e-08!2;UBERON:0001829!7.03e-08!2;UBERON:0004089!7.03e-08!2;UBERON:0001557!6.50e-07!19;UBERON:0001444!7.05e-07!48 | |ontology_enrichment_uberon=UBERON:0000341!2.09e-27!2;UBERON:0001723!3.86e-19!3;UBERON:0001033!3.86e-19!3;UBERON:0010056!3.86e-19!3;UBERON:0000078!2.06e-18!18;UBERON:0000166!8.67e-16!21;UBERON:0000989!5.42e-15!1;UBERON:0008811!5.42e-15!1;UBERON:0006258!5.42e-15!1;UBERON:0005876!5.42e-15!1;UBERON:0004874!5.42e-15!1;UBERON:0002426!8.17e-15!1;UBERON:0003831!8.17e-15!1;UBERON:0003898!8.17e-15!1;UBERON:0004830!8.17e-15!1;UBERON:0001774!8.17e-15!1;UBERON:0003830!8.17e-15!1;UBERON:0005175!8.17e-15!1;UBERON:0003897!8.17e-15!1;UBERON:0001103!8.17e-15!1;UBERON:0010084!8.17e-15!1;UBERON:0007029!1.07e-14!1;UBERON:0001831!1.84e-14!1;UBERON:0001567!1.84e-14!1;UBERON:0008801!1.84e-14!1;UBERON:0002372!3.15e-14!1;UBERON:0001961!3.15e-14!1;UBERON:0001744!3.15e-14!1;UBERON:0001735!3.15e-14!1;UBERON:0001042!1.18e-12!10;UBERON:0009145!1.18e-12!10;UBERON:0000165!7.67e-12!28;UBERON:0000930!7.67e-12!28;UBERON:0006562!1.47e-11!11;UBERON:0001044!1.01e-09!6;UBERON:0003293!1.01e-09!6;UBERON:0003294!1.01e-09!6;UBERON:0010047!1.01e-09!6;UBERON:0000167!1.01e-09!6;UBERON:0000161!1.83e-09!35;UBERON:0001630!4.69e-08!2;UBERON:0005090!4.69e-08!2;UBERON:0001829!7.03e-08!2;UBERON:0004089!7.03e-08!2;UBERON:0001557!6.50e-07!19;UBERON:0001444!7.05e-07!48 | ||
|ontology_enrichment_uberon_v019=UBERON:0001723;6.99e-45;3!UBERON:0001033;6.99e-45;3!UBERON:0000989;2.58e-34;1!UBERON:0008811;2.58e-34;1!UBERON:0002426;8.34e-34;1!UBERON:0003831;8.34e-34;1!UBERON:0003898;8.34e-34;1!UBERON:0004830;8.34e-34;1!UBERON:0003830;8.34e-34;1!UBERON:0005175;8.34e-34;1!UBERON:0001774;8.34e-34;1!UBERON:0001103;8.34e-34;1!UBERON:0001134;3.50e-19;16!UBERON:0002036;3.50e-19;16!UBERON:0005090;1.17e-17;2!UBERON:0001630;1.17e-17;2!UBERON:0002385;1.31e-10;31!UBERON:0001015;1.31e-10;31!UBERON:0000383;1.31e-10;31!UBERON:0000020;9.26e-07;23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,6.25e-45,3;UBERON:0001033,6.25e-45,3;UBERON:0010056,6.25e-45,3;UBERON:0000989,2.58e-34,1;UBERON:0008811,2.58e-34,1;UBERON:0006258,2.58e-34,1;UBERON:0005876,2.58e-34,1;UBERON:0004874,2.58e-34,1;UBERON:0002426,7.06e-34,1;UBERON:0003831,7.06e-34,1;UBERON:0003898,7.06e-34,1;UBERON:0004830,7.06e-34,1;UBERON:0003830,7.06e-34,1;UBERON:0005175,7.06e-34,1;UBERON:0001774,7.06e-34,1;UBERON:0001103,7.06e-34,1;UBERON:0010084,7.06e-34,1;UBERON:0005090,1.07e-17,2;UBERON:0001630,1.07e-17,2;UBERON:0001042,2.66e-14,10;UBERON:0009145,2.66e-14,10;UBERON:0006562,4.25e-13,11;UBERON:0008814,2.17e-08,18;UBERON:0001557,5.35e-08,19;UBERON:0000166,4.94e-07,22 | |||
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|short_description=p6@CALML6 | |short_description=p6@CALML6 | ||
}} | }} |
Latest revision as of 05:17, 19 September 2015
Short description: | p6@CALML6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CALML6_5end |
Coexpression cluster: | C197_tongue_esophagus_tonsil_salivary_cervix_nasal_Gingival |
Association with transcript: | 60bp_to_ENST00000378604_5end |
EntrezGene: | CALML6 |
HGNC: | 24193 |
UniProt: | B1AKR1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 6.25e-45 | 3 |
gustatory system | 6.25e-45 | 3 |
future tongue | 6.25e-45 | 3 |
penis | 2.58e-34 | 1 |
intromittent organ | 2.58e-34 | 1 |
lateral plate mesenchyme | 2.58e-34 | 1 |
undifferentiated genital tubercle | 2.58e-34 | 1 |
somatopleure | 2.58e-34 | 1 |
chest muscle | 7.06e-34 | 1 |
respiratory system muscle | 7.06e-34 | 1 |
skeletal muscle of trunk | 7.06e-34 | 1 |
respiratory system skeletal muscle | 7.06e-34 | 1 |
thoracic segment muscle | 7.06e-34 | 1 |
chest organ | 7.06e-34 | 1 |
muscle of trunk | 7.06e-34 | 1 |
diaphragm | 7.06e-34 | 1 |
future diaphragm | 7.06e-34 | 1 |
muscle structure | 1.07e-17 | 2 |
muscle organ | 1.07e-17 | 2 |
chordate pharynx | 2.66e-14 | 10 |
pharyngeal region of foregut | 2.66e-14 | 10 |
pharynx | 4.25e-13 | 11 |
pharyngeal arch system | 2.17e-08 | 18 |
upper respiratory tract | 5.35e-08 | 19 |
oral opening | 4.94e-07 | 22 |