FFCP PHASE1:Hg19::chr1:76081726..76081756,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:76081726..76081756,- to FFCP PHASE1:Hg19::chr1:76081726..76081756,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=204962 | |EntrezGene=204962 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=28524 | |HGNC=28524 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-32bp_to_uc010ora.1_5end | |||
|cluster_id=chr1:76081726..76081756,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_4_at_SLC44A5_5end | |||
|id=chr1:76081726..76081756,- | |||
|ontology_enrichment_celltype=CL:0000047!1.74e-07!8;CL:0002319!3.07e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000540;5.97e-15;6!CL:0000404;5.97e-15;6!CL:0000167;1.05e-10;1!CL:0000164;1.05e-10;1!CL:0000502;1.05e-10;1!CL:0000172;1.05e-10;1!CL:0000173;1.05e-10;1!CL:0002319;8.69e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.60e-19,8;CL:0000540,4.60e-15,6;CL:0000031,4.60e-15,6;CL:0000404,4.60e-15,6;CL:0000167,1.46e-10,1;CL:0000164,1.46e-10,1;CL:0000502,1.46e-10,1;CL:0000172,1.46e-10,1;CL:0000173,1.46e-10,1;CL:0002351,1.46e-10,1;CL:0002319,7.93e-09,25 | |||
|ontology_enrichment_development_v019=CL:0000031;5.97e-15;6!CL:0002351;1.05e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;1.05e-10;1!DOID:169;3.68e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.46e-10,1;DOID:169,3.92e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.20e-45!94;UBERON:0001016!2.20e-45!94;UBERON:0005743!3.29e-44!86;UBERON:0001017!1.32e-43!82;UBERON:0001049!8.84e-36!57;UBERON:0005068!8.84e-36!57;UBERON:0006241!8.84e-36!57;UBERON:0007135!8.84e-36!57;UBERON:0001869!6.17e-35!32;UBERON:0001893!9.79e-35!34;UBERON:0002020!1.34e-34!34;UBERON:0003528!1.34e-34!34;UBERON:0000955!1.36e-33!69;UBERON:0006238!1.36e-33!69;UBERON:0002780!2.54e-33!41;UBERON:0001890!2.54e-33!41;UBERON:0006240!2.54e-33!41;UBERON:0002791!3.33e-33!33;UBERON:0003080!2.75e-32!42;UBERON:0003075!1.85e-31!86;UBERON:0007284!1.85e-31!86;UBERON:0002346!4.94e-31!90;UBERON:0002619!2.00e-30!22;UBERON:0002616!4.74e-30!59;UBERON:0000956!8.54e-29!25;UBERON:0000203!8.54e-29!25;UBERON:0003056!3.48e-28!61;UBERON:0001950!2.15e-27!20;UBERON:0000924!6.95e-23!173;UBERON:0006601!6.95e-23!173;UBERON:0004121!8.98e-23!169;UBERON:0007023!7.95e-20!115;UBERON:0000033!1.55e-18!123;UBERON:0000153!5.11e-18!129;UBERON:0007811!5.11e-18!129;UBERON:0000025!5.76e-16!194;UBERON:0004111!8.27e-12!241;UBERON:0000200!1.39e-10!6;UBERON:0000483!1.77e-10!309;UBERON:0000119!3.41e-10!312;UBERON:0000477!1.04e-09!286;UBERON:0002021!1.44e-09!5;UBERON:0001872!1.77e-09!5;UBERON:0000064!8.35e-08!219;UBERON:0001871!1.43e-07!7;UBERON:0002308!1.83e-07!9;UBERON:0000125!1.83e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.43e-35;20!UBERON:0002619;3.58e-32;22!UBERON:0000956;2.48e-28;25!UBERON:0000203;2.48e-28;25!UBERON:0001869;4.77e-25;32!UBERON:0001893;1.80e-21;34!UBERON:0002791;4.45e-21;32!UBERON:0002021;9.35e-18;5!UBERON:0002780;7.49e-17;41!UBERON:0001890;7.49e-17;41!UBERON:0003528;3.32e-16;34!UBERON:0002020;3.32e-16;34!UBERON:0001870;1.93e-13;3!UBERON:0000073;2.22e-11;53!UBERON:0002616;2.22e-11;53!UBERON:0002022;1.05e-10;1!UBERON:0007190;1.05e-10;1!UBERON:0001016;1.45e-10;83!UBERON:0001017;2.12e-10;75!UBERON:0000955;1.40e-09;68!UBERON:0001872;1.16e-08;5!UBERON:0000200;3.68e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.44e-35,20;UBERON:0002619,3.59e-32,22;UBERON:0001016,9.52e-31,89;UBERON:0001017,1.77e-30,81;UBERON:0000956,2.48e-28,25;UBERON:0000203,2.48e-28,25;UBERON:0001869,3.65e-27,32;UBERON:0001893,1.56e-25,34;UBERON:0002791,4.42e-22,32;UBERON:0002780,4.77e-21,41;UBERON:0001890,4.77e-21,41;UBERON:0003080,4.77e-21,41;UBERON:0006240,4.77e-21,41;UBERON:0000955,8.19e-21,68;UBERON:0006238,8.19e-21,68;UBERON:0003528,9.40e-21,34;UBERON:0002020,9.40e-21,34;UBERON:0000073,1.87e-19,53;UBERON:0002616,1.87e-19,53;UBERON:0001049,2.41e-18,56;UBERON:0005068,2.41e-18,56;UBERON:0006241,2.41e-18,56;UBERON:0007135,2.41e-18,56;UBERON:0002021,6.64e-18,5;UBERON:0004121,5.51e-15,171;UBERON:0000924,5.51e-15,171;UBERON:0006601,5.51e-15,171;UBERON:0011216,5.99e-14,223;UBERON:0003056,8.45e-14,61;UBERON:0001870,2.06e-13,3;UBERON:0003075,4.44e-12,82;UBERON:0007284,4.44e-12,82;UBERON:0002346,1.90e-11,86;UBERON:0002022,1.10e-10,1;UBERON:0007190,1.77e-10,1;UBERON:0010371,3.40e-09,104;UBERON:0001872,1.37e-08,5;UBERON:0000200,4.58e-07,6;UBERON:0010314,6.65e-07,132 | |||
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| ||
|short_description=p4@SLC44A5 | |||
}} | }} |
Latest revision as of 05:51, 19 September 2015
Short description: | p4@SLC44A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC44A5_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -32bp_to_uc010ora.1_5end |
EntrezGene: | SLC44A5 |
HGNC: | 28524 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.60e-19 | 8 |
neuron | 4.60e-15 | 6 |
neuroblast | 4.60e-15 | 6 |
electrically signaling cell | 4.60e-15 | 6 |
peptide hormone secreting cell | 1.46e-10 | 1 |
enteroendocrine cell | 1.46e-10 | 1 |
type D enteroendocrine cell | 1.46e-10 | 1 |
somatostatin secreting cell | 1.46e-10 | 1 |
pancreatic D cell | 1.46e-10 | 1 |
progenitor cell of endocrine pancreas | 1.46e-10 | 1 |
neural cell | 7.93e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.46e-10 | 1 |
neuroendocrine tumor | 3.92e-07 | 6 |