FFCP PHASE1:Hg19::chrX:119694924..119694957,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8450 | |EntrezGene=8450 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2555 | |HGNC=2555 | ||
|TSSclassifier=strong | |||
|UniProt=Q13620 | |UniProt=Q13620 | ||
|association_with_transcript=-107bp_to_NM_001079872,uc004esv.2_5end | |association_with_transcript=-107bp_to_NM_001079872,uc004esv.2_5end | ||
|cluster_id=chrX:119694924..119694957,- | |||
|description=CAGE_peak_6_at_CUL4B_5end | |description=CAGE_peak_6_at_CUL4B_5end | ||
|id=chrX:119694924..119694957,- | |id=chrX:119694924..119694957,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.91e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.37e-28!115;UBERON:0001049!2.41e-19!57;UBERON:0005068!2.41e-19!57;UBERON:0006241!2.41e-19!57;UBERON:0007135!2.41e-19!57;UBERON:0000073!4.01e-19!94;UBERON:0001016!4.01e-19!94;UBERON:0001017!8.76e-19!82;UBERON:0000955!1.04e-18!69;UBERON:0006238!1.04e-18!69;UBERON:0005743!1.43e-18!86;UBERON:0002616!2.82e-17!59;UBERON:0003080!2.17e-16!42;UBERON:0002780!2.19e-16!41;UBERON:0001890!2.19e-16!41;UBERON:0006240!2.19e-16!41;UBERON:0002346!1.86e-15!90;UBERON:0003075!2.05e-15!86;UBERON:0007284!2.05e-15!86;UBERON:0002020!1.21e-13!34;UBERON:0003528!1.21e-13!34;UBERON:0001893!2.97e-13!34;UBERON:0002791!7.10e-13!33;UBERON:0001869!1.28e-12!32;UBERON:0002619!3.50e-12!22;UBERON:0000033!7.77e-12!123;UBERON:0000153!1.47e-11!129;UBERON:0007811!1.47e-11!129;UBERON:0001950!3.25e-11!20;UBERON:0000924!5.78e-11!173;UBERON:0006601!5.78e-11!173;UBERON:0004121!9.29e-11!169;UBERON:0003056!3.54e-10!61;UBERON:0000956!8.05e-10!25;UBERON:0000203!8.05e-10!25;UBERON:0000062!1.99e-07!511;UBERON:0000479!6.40e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.83e-12;22!UBERON:0002780;2.02e-12;41!UBERON:0001890;2.02e-12;41!UBERON:0003528;4.38e-12;34!UBERON:0002020;4.38e-12;34!UBERON:0000073;5.62e-12;53!UBERON:0002616;5.62e-12;53!UBERON:0001893;8.85e-12;34!UBERON:0001869;1.00e-11;32!UBERON:0002791;1.25e-11;32!UBERON:0001950;1.83e-11;20!UBERON:0000956;3.07e-10;25!UBERON:0000203;3.07e-10;25!UBERON:0000955;3.73e-09;68!UBERON:0001017;4.28e-09;75!UBERON:0007023;5.82e-09;114!UBERON:0001016;8.03e-09;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.14e-28,114;UBERON:0001049,2.30e-19,56;UBERON:0005068,2.30e-19,56;UBERON:0006241,2.30e-19,56;UBERON:0007135,2.30e-19,56;UBERON:0001016,3.24e-19,89;UBERON:0000073,8.31e-19,53;UBERON:0002616,8.31e-19,53;UBERON:0001017,1.04e-18,81;UBERON:0000955,1.19e-18,68;UBERON:0006238,1.19e-18,68;UBERON:0002780,2.01e-16,41;UBERON:0001890,2.01e-16,41;UBERON:0003080,2.01e-16,41;UBERON:0006240,2.01e-16,41;UBERON:0002346,3.19e-14,86;UBERON:0003075,3.59e-14,82;UBERON:0007284,3.59e-14,82;UBERON:0003528,1.13e-13,34;UBERON:0002020,1.13e-13,34;UBERON:0001893,2.77e-13,34;UBERON:0011216,6.88e-13,223;UBERON:0001869,1.19e-12,32;UBERON:0002791,1.46e-12,32;UBERON:0002619,3.29e-12,22;UBERON:0001950,3.07e-11,20;UBERON:0003056,1.64e-10,61;UBERON:0004121,2.03e-10,171;UBERON:0000924,2.03e-10,171;UBERON:0006601,2.03e-10,171;UBERON:0000956,7.66e-10,25;UBERON:0000203,7.66e-10,25;UBERON:0010371,1.31e-08,104 | |||
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| ||
|short_description=p6@CUL4B | |short_description=p6@CUL4B | ||
}} | }} |
Latest revision as of 06:42, 19 September 2015
Short description: | p6@CUL4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CUL4B_5end |
Coexpression cluster: | NA |
Association with transcript: | -107bp_to_NM_001079872, uc004esv.2_5end |
EntrezGene: | CUL4B |
HGNC: | 2555 |
UniProt: | Q13620 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 9.14e-28 | 114 |
neural tube | 2.30e-19 | 56 |
neural rod | 2.30e-19 | 56 |
future spinal cord | 2.30e-19 | 56 |
neural keel | 2.30e-19 | 56 |
nervous system | 3.24e-19 | 89 |
regional part of nervous system | 8.31e-19 | 53 |
regional part of brain | 8.31e-19 | 53 |
central nervous system | 1.04e-18 | 81 |
brain | 1.19e-18 | 68 |
future brain | 1.19e-18 | 68 |
regional part of forebrain | 2.01e-16 | 41 |
forebrain | 2.01e-16 | 41 |
anterior neural tube | 2.01e-16 | 41 |
future forebrain | 2.01e-16 | 41 |
neurectoderm | 3.19e-14 | 86 |
neural plate | 3.59e-14 | 82 |
presumptive neural plate | 3.59e-14 | 82 |
brain grey matter | 1.13e-13 | 34 |
gray matter | 1.13e-13 | 34 |
telencephalon | 2.77e-13 | 34 |
organ system subdivision | 6.88e-13 | 223 |
cerebral hemisphere | 1.19e-12 | 32 |
regional part of telencephalon | 1.46e-12 | 32 |
regional part of cerebral cortex | 3.29e-12 | 22 |
neocortex | 3.07e-11 | 20 |
pre-chordal neural plate | 1.64e-10 | 61 |
ectoderm-derived structure | 2.03e-10 | 171 |
ectoderm | 2.03e-10 | 171 |
presumptive ectoderm | 2.03e-10 | 171 |
cerebral cortex | 7.66e-10 | 25 |
pallium | 7.66e-10 | 25 |
ecto-epithelium | 1.31e-08 | 104 |