FFCP PHASE1:Hg19::chrX:119709637..119709653,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8450 | |EntrezGene=8450 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2555 | |HGNC=2555 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000404115_5end | |association_with_transcript=0bp_to_ENST00000404115_5end | ||
|cluster_id=chrX:119709637..119709653,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_30_at_CUL4B_5end | |description=CAGE_peak_30_at_CUL4B_5end | ||
|id=chrX:119709637..119709653,- | |id=chrX:119709637..119709653,- | ||
|ontology_enrichment_celltype=CL:0000039!1.96e-39!7;CL:0000586!1.96e-39!7;CL:0002322!1.06e-09!5 | |ontology_enrichment_celltype=CL:0000039!1.96e-39!7;CL:0000586!1.96e-39!7;CL:0002322!1.06e-09!5 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.04e-19;7!CL:0000586;1.04e-19;7!CL:0000083;1.57e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.04e-19,7;CL:0000586,1.04e-19,7;CL:0000083,1.57e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.03e-53;10!UBERON:0005564;6.03e-53;10!UBERON:0006603;6.16e-07;65 | |||
|ontology_enrichment_disease=DOID:1799!1.11e-12!1;DOID:10165!1.11e-12!1;DOID:1798!1.11e-12!1;DOID:3095!1.47e-12!22;DOID:2994!1.47e-12!22;DOID:1909!7.20e-07!2 | |ontology_enrichment_disease=DOID:1799!1.11e-12!1;DOID:10165!1.11e-12!1;DOID:1798!1.11e-12!1;DOID:3095!1.47e-12!22;DOID:2994!1.47e-12!22;DOID:1909!7.20e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:1799;7.06e-34;1!DOID:10165;7.06e-34;1!DOID:1798;7.06e-34;1!DOID:1793;1.57e-09;4!DOID:3095;5.91e-07;22!DOID:2994;5.91e-07;22!DOID:170;8.97e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,7.06e-34,1;DOID:10165,7.06e-34,1;DOID:1798,7.06e-34,1;DOID:1793,1.57e-09,4;DOID:3095,5.91e-07,22;DOID:2994,5.91e-07,22;DOID:170,8.97e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000473!3.44e-35!8;UBERON:0003135!1.30e-25!11;UBERON:0000991!2.09e-13!21;UBERON:0009196!2.09e-13!21;UBERON:0009117!2.09e-13!21;UBERON:0005564!2.09e-13!21;UBERON:0004176!8.56e-13!22;UBERON:0003101!8.56e-13!22;UBERON:0000079!8.56e-13!22;UBERON:0001282!3.08e-12!1;UBERON:0009842!3.08e-12!1;UBERON:0003704!3.08e-12!1;UBERON:0001171!3.08e-12!1;UBERON:0001172!3.08e-12!1;UBERON:0002323!1.78e-08!46;UBERON:0003133!4.63e-08!48;UBERON:0004458!6.23e-08!49 | |ontology_enrichment_uberon=UBERON:0000473!3.44e-35!8;UBERON:0003135!1.30e-25!11;UBERON:0000991!2.09e-13!21;UBERON:0009196!2.09e-13!21;UBERON:0009117!2.09e-13!21;UBERON:0005564!2.09e-13!21;UBERON:0004176!8.56e-13!22;UBERON:0003101!8.56e-13!22;UBERON:0000079!8.56e-13!22;UBERON:0001282!3.08e-12!1;UBERON:0009842!3.08e-12!1;UBERON:0003704!3.08e-12!1;UBERON:0001171!3.08e-12!1;UBERON:0001172!3.08e-12!1;UBERON:0002323!1.78e-08!46;UBERON:0003133!4.63e-08!48;UBERON:0004458!6.23e-08!49 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.05e-66;8!UBERON:0003135;3.23e-48;11!UBERON:0000991;1.19e-25;21!UBERON:0003101;1.61e-24;22!UBERON:0000079;1.61e-24;22!UBERON:0002323;3.07e-16;45!UBERON:0002553;1.82e-10;52!UBERON:0003133;2.22e-10;44!UBERON:0004458;4.99e-10;48!UBERON:0005156;3.78e-07;59!UBERON:0000990;3.78e-07;59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.05e-66,8;UBERON:0003135,3.24e-48,11;UBERON:0000991,1.19e-25,21;UBERON:0009196,1.19e-25,21;UBERON:0009117,1.19e-25,21;UBERON:0005564,1.19e-25,21;UBERON:0004176,1.61e-24,22;UBERON:0003101,1.61e-24,22;UBERON:0000079,1.61e-24,22;UBERON:0002323,2.29e-18,46;UBERON:0004458,2.82e-17,49;UBERON:0003886,9.99e-16,54;UBERON:0002553,5.56e-14,61;UBERON:0003133,1.36e-11,48;UBERON:0005156,1.55e-09,59;UBERON:0000990,1.55e-09,59 | |||
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|short_description=p30@CUL4B | |short_description=p30@CUL4B | ||
}} | }} |
Latest revision as of 06:50, 19 September 2015
Short description: | p30@CUL4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_CUL4B_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000404115_5end |
EntrezGene: | CUL4B |
HGNC: | 2555 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.04e-19 | 7 |
germ cell | 1.04e-19 | 7 |
epithelial cell of pancreas | 1.57e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
testis | 6.05e-66 | 8 |
male reproductive organ | 3.24e-48 | 11 |
gonad | 1.19e-25 | 21 |
indifferent external genitalia | 1.19e-25 | 21 |
indifferent gonad | 1.19e-25 | 21 |
gonad primordium | 1.19e-25 | 21 |
external genitalia | 1.61e-24 | 22 |
male organism | 1.61e-24 | 22 |
male reproductive system | 1.61e-24 | 22 |
body cavity | 2.29e-18 | 46 |
body cavity or lining | 2.82e-17 | 49 |
body cavity precursor | 9.99e-16 | 54 |
anatomical cavity | 5.56e-14 | 61 |
reproductive organ | 1.36e-11 | 48 |
reproductive structure | 1.55e-09 | 59 |
reproductive system | 1.55e-09 | 59 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 7.06e-34 | 1 |
endocrine pancreas cancer | 7.06e-34 | 1 |
pancreatic endocrine carcinoma | 7.06e-34 | 1 |
pancreatic cancer | 1.57e-09 | 4 |
germ cell and embryonal cancer | 5.91e-07 | 22 |
germ cell cancer | 5.91e-07 | 22 |
endocrine gland cancer | 8.97e-07 | 6 |